Protein–RNA interactions for Protein: Q9UHP3

USP25, Ubiquitin carboxyl-terminal hydrolase 25, humanhuman

Predictions only

Length 1,055 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP25Q9UHP3 Y_RNA.157-201ENST00000363638 102 ntBASIC4.27□□□□□ -1.73
USP25Q9UHP3 CRP-203ENST00000368111 512 ntTSL 3 BASIC4.27□□□□□ -1.73
USP25Q9UHP3 SNORA69-201ENST00000383895 132 ntBASIC4.27□□□□□ -1.73
USP25Q9UHP3 Y_RNA.509-201ENST00000384506 99 ntBASIC4.27□□□□□ -1.73
USP25Q9UHP3 PTMAP5-201ENST00000393073 333 ntBASIC4.27□□□□□ -1.73
USP25Q9UHP3 RNA5SP317-201ENST00000410176 116 ntBASIC4.27□□□□□ -1.73
USP25Q9UHP3 RN7SKP27-201ENST00000410684 333 ntBASIC4.27□□□□□ -1.73
USP25Q9UHP3 RNA5SP311-201ENST00000411290 116 ntBASIC4.27□□□□□ -1.73
USP25Q9UHP3 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC4.27□□□□□ -1.73
USP25Q9UHP3 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC4.27□□□□□ -1.73
USP25Q9UHP3 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
USP25Q9UHP3 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC4.27□□□□□ -1.73
USP25Q9UHP3 ENSA-210ENST00000503241 574 ntTSL 3 BASIC4.27□□□□□ -1.73
USP25Q9UHP3 HMGB3P15-201ENST00000507326 574 ntBASIC4.27□□□□□ -1.73
USP25Q9UHP3 RAC1P2-201ENST00000511164 579 ntBASIC4.27□□□□□ -1.73
USP25Q9UHP3 FTH1P21-201ENST00000512179 511 ntBASIC4.27□□□□□ -1.73
USP25Q9UHP3 GMPSP1-201ENST00000514075 579 ntBASIC4.27□□□□□ -1.73
USP25Q9UHP3 RNA5SP315-201ENST00000516340 116 ntBASIC4.27□□□□□ -1.73
USP25Q9UHP3 RNU6-410P-201ENST00000517006 107 ntBASIC4.27□□□□□ -1.73
USP25Q9UHP3 RNA5SP312-201ENST00000517068 116 ntBASIC4.27□□□□□ -1.73
USP25Q9UHP3 RNU6-840P-201ENST00000517275 65 ntBASIC4.27□□□□□ -1.73
USP25Q9UHP3 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC4.27□□□□□ -1.73
USP25Q9UHP3 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC4.27□□□□□ -1.73
USP25Q9UHP3 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC4.27□□□□□ -1.73
USP25Q9UHP3 AC123904.3-201ENST00000547218 814 ntBASIC4.27□□□□□ -1.73
USP25Q9UHP3 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC4.27□□□□□ -1.73
USP25Q9UHP3 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC4.27□□□□□ -1.73
USP25Q9UHP3 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC4.27□□□□□ -1.73
USP25Q9UHP3 OR4H12P-201ENST00000556269 907 ntBASIC4.27□□□□□ -1.73
USP25Q9UHP3 AC015917.1-201ENST00000579654 510 ntBASIC4.27□□□□□ -1.73
USP25Q9UHP3 AF038458.1-201ENST00000588406 262 ntBASIC4.27□□□□□ -1.73
USP25Q9UHP3 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC4.27□□□□□ -1.73
USP25Q9UHP3 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC4.27□□□□□ -1.73
USP25Q9UHP3 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC4.27□□□□□ -1.73
USP25Q9UHP3 AC106900.2-201ENST00000604994 317 ntBASIC4.27□□□□□ -1.73
USP25Q9UHP3 SNORA62.6-201ENST00000606322 83 ntBASIC4.27□□□□□ -1.73
USP25Q9UHP3 DISC2.1-201ENST00000612827 205 ntBASIC4.27□□□□□ -1.73
USP25Q9UHP3 AC009233.1-201ENST00000616477 371 ntBASIC4.27□□□□□ -1.73
USP25Q9UHP3 AC024940.5-201ENST00000622889 474 ntBASIC4.27□□□□□ -1.73
USP25Q9UHP3 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
USP25Q9UHP3 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
USP25Q9UHP3 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
USP25Q9UHP3 SDAD1P2-201ENST00000441308 2028 ntBASIC4.27□□□□□ -1.73
USP25Q9UHP3 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC4.27□□□□□ -1.73
USP25Q9UHP3 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
USP25Q9UHP3 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
USP25Q9UHP3 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC4.27□□□□□ -1.73
USP25Q9UHP3 PAPPA-AS1-201ENST00000445861 2450 ntBASIC4.27□□□□□ -1.73
USP25Q9UHP3 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC4.26□□□□□ -1.73
USP25Q9UHP3 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
USP25Q9UHP3 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC4.26□□□□□ -1.73
USP25Q9UHP3 IDE-202ENST00000371581 4480 ntTSL 2 BASIC4.26□□□□□ -1.73
USP25Q9UHP3 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
USP25Q9UHP3 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
USP25Q9UHP3 RNU6-213P-201ENST00000384051 104 ntBASIC4.26□□□□□ -1.73
USP25Q9UHP3 U1.1-201ENST00000384101 164 ntBASIC4.26□□□□□ -1.73
USP25Q9UHP3 RNU6-74P-201ENST00000384235 107 ntBASIC4.26□□□□□ -1.73
USP25Q9UHP3 SNORA36C-201ENST00000384289 132 ntBASIC4.26□□□□□ -1.73
USP25Q9UHP3 Y_RNA.535-201ENST00000384612 99 ntBASIC4.26□□□□□ -1.73
USP25Q9UHP3 SNORA57.1-201ENST00000391227 145 ntBASIC4.26□□□□□ -1.73
USP25Q9UHP3 AL590704.1-201ENST00000402856 794 ntBASIC4.26□□□□□ -1.73
USP25Q9UHP3 TXNP7-201ENST00000406296 293 ntBASIC4.26□□□□□ -1.73
USP25Q9UHP3 AL354719.1-201ENST00000406535 843 ntBASIC4.26□□□□□ -1.73
USP25Q9UHP3 RNU6-373P-201ENST00000411247 98 ntBASIC4.26□□□□□ -1.73
USP25Q9UHP3 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC4.26□□□□□ -1.73
USP25Q9UHP3 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC4.26□□□□□ -1.73
USP25Q9UHP3 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC4.26□□□□□ -1.73
USP25Q9UHP3 AC008850.1-201ENST00000427546 362 ntBASIC4.26□□□□□ -1.73
USP25Q9UHP3 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC4.26□□□□□ -1.73
USP25Q9UHP3 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC4.26□□□□□ -1.73
USP25Q9UHP3 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
USP25Q9UHP3 SNORA71B-202ENST00000439232 272 ntBASIC4.26□□□□□ -1.73
USP25Q9UHP3 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC4.26□□□□□ -1.73
USP25Q9UHP3 TXNP1-201ENST00000441872 371 ntBASIC4.26□□□□□ -1.73
USP25Q9UHP3 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC4.26□□□□□ -1.73
USP25Q9UHP3 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC4.26□□□□□ -1.73
USP25Q9UHP3 MTCO3P45-201ENST00000443036 613 ntBASIC4.26□□□□□ -1.73
USP25Q9UHP3 AC093019.1-201ENST00000443135 252 ntBASIC4.26□□□□□ -1.73
USP25Q9UHP3 RPL23AP14-201ENST00000468281 468 ntBASIC4.26□□□□□ -1.73
USP25Q9UHP3 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC4.26□□□□□ -1.73
USP25Q9UHP3 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
USP25Q9UHP3 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC4.26□□□□□ -1.73
USP25Q9UHP3 AC010486.1-201ENST00000511793 424 ntBASIC4.26□□□□□ -1.73
USP25Q9UHP3 PANCR-202ENST00000513690 448 ntTSL 2 BASIC4.26□□□□□ -1.73
USP25Q9UHP3 SNORA70.16-201ENST00000516390 95 ntBASIC4.26□□□□□ -1.73
USP25Q9UHP3 SCARNA24.1-201ENST00000516465 137 ntBASIC4.26□□□□□ -1.73
USP25Q9UHP3 NDUFB9P3-201ENST00000521269 501 ntBASIC4.26□□□□□ -1.73
USP25Q9UHP3 AP001804.3-201ENST00000525146 880 ntBASIC4.26□□□□□ -1.73
USP25Q9UHP3 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
USP25Q9UHP3 AL138976.2-201ENST00000563989 694 ntBASIC4.26□□□□□ -1.73
USP25Q9UHP3 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC4.26□□□□□ -1.73
USP25Q9UHP3 RPL23AP84-201ENST00000571193 464 ntBASIC4.26□□□□□ -1.73
USP25Q9UHP3 KLKP1-201ENST00000595979 403 ntBASIC4.26□□□□□ -1.73
USP25Q9UHP3 AC016727.1-205ENST00000605437 569 ntBASIC4.26□□□□□ -1.73
USP25Q9UHP3 AC079684.1-201ENST00000621405 437 ntBASIC4.26□□□□□ -1.73
USP25Q9UHP3 MIR6500-201ENST00000622700 86 ntBASIC4.26□□□□□ -1.73
USP25Q9UHP3 U6.98-201ENST00000637157 84 ntBASIC4.26□□□□□ -1.73
USP25Q9UHP3 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
USP25Q9UHP3 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
USP25Q9UHP3 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 116.2 ms