Protein–RNA interactions for Protein: Q9P219

CCDC88C, Protein Daple, humanhuman

Predictions only

Length 2,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC88CQ9P219 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC1.62□□□□□ -2.15
CCDC88CQ9P219 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC1.62□□□□□ -2.15
CCDC88CQ9P219 AC022336.2-201ENST00000568966 2538 ntBASIC1.62□□□□□ -2.15
CCDC88CQ9P219 ZNF849P-201ENST00000594711 1566 ntBASIC1.62□□□□□ -2.15
CCDC88CQ9P219 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC1.62□□□□□ -2.15
CCDC88CQ9P219 RNA5SP190-201ENST00000365222 118 ntBASIC1.62□□□□□ -2.15
CCDC88CQ9P219 RNU6ATAC3P-201ENST00000387974 126 ntBASIC1.62□□□□□ -2.15
CCDC88CQ9P219 MCTS2P-201ENST00000394552 546 ntBASIC1.62□□□□□ -2.15
CCDC88CQ9P219 AL358075.3-201ENST00000426289 226 ntBASIC1.62□□□□□ -2.15
CCDC88CQ9P219 ZYG11AP1-201ENST00000430329 837 ntBASIC1.62□□□□□ -2.15
CCDC88CQ9P219 AL162725.2-201ENST00000430545 748 ntTSL 5 BASIC1.62□□□□□ -2.15
CCDC88CQ9P219 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC1.62□□□□□ -2.15
CCDC88CQ9P219 ARF4P4-201ENST00000439608 520 ntBASIC1.62□□□□□ -2.15
CCDC88CQ9P219 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC1.62□□□□□ -2.15
CCDC88CQ9P219 AL359385.1-201ENST00000456509 365 ntBASIC1.62□□□□□ -2.15
CCDC88CQ9P219 RNU7-26P-201ENST00000458980 63 ntBASIC1.62□□□□□ -2.15
CCDC88CQ9P219 AC121161.1-201ENST00000510606 652 ntBASIC1.62□□□□□ -2.15
CCDC88CQ9P219 AC125611.1-201ENST00000549563 229 ntBASIC1.62□□□□□ -2.15
CCDC88CQ9P219 AC079148.1-201ENST00000565944 819 ntBASIC1.62□□□□□ -2.15
CCDC88CQ9P219 AC023824.2-201ENST00000566185 400 ntBASIC1.62□□□□□ -2.15
CCDC88CQ9P219 SNORD39.3-201ENST00000584451 71 ntBASIC1.62□□□□□ -2.15
CCDC88CQ9P219 AC005498.1-201ENST00000592125 465 ntBASIC1.62□□□□□ -2.15
CCDC88CQ9P219 AC016727.1-205ENST00000605437 569 ntBASIC1.62□□□□□ -2.15
CCDC88CQ9P219 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC1.62□□□□□ -2.15
CCDC88CQ9P219 AC006213.4-201ENST00000616184 634 ntBASIC1.62□□□□□ -2.15
CCDC88CQ9P219 AC108479.2-201ENST00000617314 601 ntBASIC1.62□□□□□ -2.15
CCDC88CQ9P219 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC1.62□□□□□ -2.15
CCDC88CQ9P219 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC1.62□□□□□ -2.15
CCDC88CQ9P219 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC1.62□□□□□ -2.15
CCDC88CQ9P219 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
CCDC88CQ9P219 LUZP4P1-201ENST00000415420 344 ntBASIC1.61□□□□□ -2.15
CCDC88CQ9P219 MTCYBP15-201ENST00000433123 1127 ntBASIC1.61□□□□□ -2.15
CCDC88CQ9P219 UBE2V1P13-201ENST00000436983 439 ntBASIC1.61□□□□□ -2.15
CCDC88CQ9P219 BTBD7P2-201ENST00000441962 620 ntBASIC1.61□□□□□ -2.15
CCDC88CQ9P219 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC1.61□□□□□ -2.15
CCDC88CQ9P219 AC092155.2-201ENST00000454675 477 ntBASIC1.61□□□□□ -2.15
CCDC88CQ9P219 PABPC1P3-201ENST00000469174 459 ntBASIC1.61□□□□□ -2.15
CCDC88CQ9P219 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC1.61□□□□□ -2.15
CCDC88CQ9P219 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC1.61□□□□□ -2.15
CCDC88CQ9P219 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC1.61□□□□□ -2.15
CCDC88CQ9P219 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC1.61□□□□□ -2.15
CCDC88CQ9P219 AL442163.1-201ENST00000557251 515 ntTSL 5 BASIC1.61□□□□□ -2.15
CCDC88CQ9P219 AC133794.1-201ENST00000602731 914 ntBASIC1.61□□□□□ -2.15
CCDC88CQ9P219 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC1.61□□□□□ -2.15
CCDC88CQ9P219 AC091946.2-201ENST00000606105 291 ntBASIC1.61□□□□□ -2.15
CCDC88CQ9P219 MIR502-201ENST00000606349 86 ntBASIC1.61□□□□□ -2.15
CCDC88CQ9P219 AL590396.4-201ENST00000636779 956 ntBASIC1.61□□□□□ -2.15
CCDC88CQ9P219 MIR378A-201ENST00000362177 66 ntBASIC1.61□□□□□ -2.15
CCDC88CQ9P219 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC1.61□□□□□ -2.15
CCDC88CQ9P219 HTN3-201ENST00000381057 493 ntAPPRIS ALT2 TSL 2 BASIC1.61□□□□□ -2.15
CCDC88CQ9P219 AC019129.1-201ENST00000403786 261 ntBASIC1.61□□□□□ -2.15
CCDC88CQ9P219 RPS3AP24-201ENST00000407896 734 ntBASIC1.61□□□□□ -2.15
CCDC88CQ9P219 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC1.61□□□□□ -2.15
CCDC88CQ9P219 FCF1P2-201ENST00000415284 583 ntBASIC1.61□□□□□ -2.15
CCDC88CQ9P219 HSFY1P1-202ENST00000425038 1381 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
CCDC88CQ9P219 AL365496.1-201ENST00000426885 215 ntBASIC1.61□□□□□ -2.15
CCDC88CQ9P219 AC241584.1-201ENST00000438469 1241 ntBASIC1.61□□□□□ -2.15
CCDC88CQ9P219 RPS15AP27-201ENST00000449183 343 ntBASIC1.61□□□□□ -2.15
CCDC88CQ9P219 MRPL42P4-201ENST00000453267 443 ntBASIC1.61□□□□□ -2.15
CCDC88CQ9P219 AC013828.1-201ENST00000481845 158 ntBASIC1.61□□□□□ -2.15
CCDC88CQ9P219 RPS27P26-201ENST00000494583 239 ntBASIC1.61□□□□□ -2.15
CCDC88CQ9P219 AC090453.1-201ENST00000495560 436 ntBASIC1.61□□□□□ -2.15
CCDC88CQ9P219 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
CCDC88CQ9P219 MTCO1P9-201ENST00000505577 1534 ntBASIC1.61□□□□□ -2.15
CCDC88CQ9P219 MRPS36P2-201ENST00000512569 299 ntBASIC1.61□□□□□ -2.15
CCDC88CQ9P219 AC022483.1-201ENST00000514020 567 ntBASIC1.61□□□□□ -2.15
CCDC88CQ9P219 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC1.61□□□□□ -2.15
CCDC88CQ9P219 MIR100HG-213ENST00000531470 560 ntTSL 4 BASIC1.61□□□□□ -2.15
CCDC88CQ9P219 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC1.61□□□□□ -2.15
CCDC88CQ9P219 AC106796.1-201ENST00000577173 615 ntTSL 3 BASIC1.61□□□□□ -2.15
CCDC88CQ9P219 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC1.61□□□□□ -2.15
CCDC88CQ9P219 MIR4666A-201ENST00000580160 79 ntBASIC1.61□□□□□ -2.15
CCDC88CQ9P219 AC015688.2-201ENST00000584523 262 ntBASIC1.61□□□□□ -2.15
CCDC88CQ9P219 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC1.61□□□□□ -2.15
CCDC88CQ9P219 AC091132.5-202ENST00000587078 501 ntTSL 3 BASIC1.61□□□□□ -2.15
CCDC88CQ9P219 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC1.61□□□□□ -2.15
CCDC88CQ9P219 AC012493.3-201ENST00000604494 112 ntBASIC1.61□□□□□ -2.15
CCDC88CQ9P219 AL445493.3-201ENST00000619568 477 ntBASIC1.61□□□□□ -2.15
CCDC88CQ9P219 AC097460.3-201ENST00000623099 442 ntBASIC1.61□□□□□ -2.15
CCDC88CQ9P219 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC1.6□□□□□ -2.15
CCDC88CQ9P219 HMGB1P5-201ENST00000255320 642 ntBASIC1.6□□□□□ -2.15
CCDC88CQ9P219 SNRPEP2-201ENST00000397592 279 ntBASIC1.6□□□□□ -2.15
CCDC88CQ9P219 RNU2-28P-201ENST00000410457 189 ntBASIC1.6□□□□□ -2.15
CCDC88CQ9P219 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC1.6□□□□□ -2.15
CCDC88CQ9P219 AC092634.2-201ENST00000428146 1010 ntBASIC1.6□□□□□ -2.15
CCDC88CQ9P219 AL445687.1-201ENST00000439946 251 ntBASIC1.6□□□□□ -2.15
CCDC88CQ9P219 RAC1P7-201ENST00000445367 377 ntBASIC1.6□□□□□ -2.15
CCDC88CQ9P219 NDUFA5P7-201ENST00000452914 242 ntBASIC1.6□□□□□ -2.15
CCDC88CQ9P219 SNORD121B-201ENST00000458838 81 ntBASIC1.6□□□□□ -2.15
CCDC88CQ9P219 NAA50-206ENST00000493454 964 ntTSL 2 BASIC1.6□□□□□ -2.15
CCDC88CQ9P219 AC084024.2-201ENST00000503480 791 ntBASIC1.6□□□□□ -2.15
CCDC88CQ9P219 LINC01612-201ENST00000504509 469 ntTSL 3 BASIC1.6□□□□□ -2.15
CCDC88CQ9P219 RNA5SP182-201ENST00000516064 82 ntBASIC1.6□□□□□ -2.15
CCDC88CQ9P219 OR8K2P-201ENST00000524645 927 ntBASIC1.6□□□□□ -2.15
CCDC88CQ9P219 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC1.6□□□□□ -2.15
CCDC88CQ9P219 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC1.6□□□□□ -2.15
CCDC88CQ9P219 TRAV28-201ENST00000557548 323 ntBASIC1.6□□□□□ -2.15
CCDC88CQ9P219 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC1.6□□□□□ -2.15
CCDC88CQ9P219 AC100781.1-203ENST00000598549 399 ntTSL 5 BASIC1.6□□□□□ -2.15
CCDC88CQ9P219 DUXAP11-201ENST00000603858 526 ntBASIC1.6□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 151.1 ms