Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 RNU6-173P-201ENST00000364215 104 ntBASIC5.26□□□□□ -1.57
CUEDC1Q9NWM3 Y_RNA.324-201ENST00000365165 102 ntBASIC5.26□□□□□ -1.57
CUEDC1Q9NWM3 Y_RNA.358-201ENST00000365491 99 ntBASIC5.26□□□□□ -1.57
CUEDC1Q9NWM3 RNU6-629P-201ENST00000384061 103 ntBASIC5.26□□□□□ -1.57
CUEDC1Q9NWM3 RNU6-937P-201ENST00000384325 106 ntBASIC5.26□□□□□ -1.57
CUEDC1Q9NWM3 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
CUEDC1Q9NWM3 Y_RNA.590-201ENST00000410140 107 ntBASIC5.26□□□□□ -1.57
CUEDC1Q9NWM3 RNU2-61P-201ENST00000411069 191 ntBASIC5.26□□□□□ -1.57
CUEDC1Q9NWM3 CYCSP33-201ENST00000414485 327 ntBASIC5.26□□□□□ -1.57
CUEDC1Q9NWM3 AC079809.1-201ENST00000415468 276 ntBASIC5.26□□□□□ -1.57
CUEDC1Q9NWM3 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC5.26□□□□□ -1.57
CUEDC1Q9NWM3 SSXP9-201ENST00000417503 292 ntBASIC5.26□□□□□ -1.57
CUEDC1Q9NWM3 AL732292.1-201ENST00000426692 226 ntBASIC5.26□□□□□ -1.57
CUEDC1Q9NWM3 AL162725.1-201ENST00000435405 301 ntBASIC5.26□□□□□ -1.57
CUEDC1Q9NWM3 AL161618.1-201ENST00000438738 761 ntTSL 5 BASIC5.26□□□□□ -1.57
CUEDC1Q9NWM3 HMGN2P21-201ENST00000447764 270 ntBASIC5.26□□□□□ -1.57
CUEDC1Q9NWM3 RPS11P1-201ENST00000451072 473 ntBASIC5.26□□□□□ -1.57
CUEDC1Q9NWM3 U8.21-201ENST00000459536 136 ntBASIC5.26□□□□□ -1.57
CUEDC1Q9NWM3 AC010285.1-201ENST00000470580 392 ntBASIC5.26□□□□□ -1.57
CUEDC1Q9NWM3 RPL7AP6-201ENST00000477943 801 ntBASIC5.26□□□□□ -1.57
CUEDC1Q9NWM3 VN1R105P-201ENST00000486595 910 ntBASIC5.26□□□□□ -1.57
CUEDC1Q9NWM3 RN7SL97P-201ENST00000486780 299 ntBASIC5.26□□□□□ -1.57
CUEDC1Q9NWM3 UBE2Q2P9-201ENST00000490086 202 ntBASIC5.26□□□□□ -1.57
CUEDC1Q9NWM3 RNU6-390P-201ENST00000516259 103 ntBASIC5.26□□□□□ -1.57
CUEDC1Q9NWM3 Y_RNA.679-201ENST00000516416 91 ntBASIC5.26□□□□□ -1.57
CUEDC1Q9NWM3 RNU2-31P-201ENST00000516954 155 ntBASIC5.26□□□□□ -1.57
CUEDC1Q9NWM3 AC024614.2-201ENST00000577584 372 ntBASIC5.26□□□□□ -1.57
CUEDC1Q9NWM3 MIR4527HG-203ENST00000600127 704 ntTSL 5 BASIC5.26□□□□□ -1.57
CUEDC1Q9NWM3 AL034351.1-201ENST00000605288 668 ntBASIC5.26□□□□□ -1.57
CUEDC1Q9NWM3 AC000068.2-201ENST00000608816 460 ntBASIC5.26□□□□□ -1.57
CUEDC1Q9NWM3 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC5.26□□□□□ -1.57
CUEDC1Q9NWM3 AC007750.1-202ENST00000418968 4098 ntTSL 5 BASIC5.26□□□□□ -1.57
CUEDC1Q9NWM3 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
CUEDC1Q9NWM3 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
CUEDC1Q9NWM3 AC023421.1-201ENST00000590535 1785 ntBASIC5.26□□□□□ -1.57
CUEDC1Q9NWM3 NBPF10-201ENST00000583866 13042 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
CUEDC1Q9NWM3 SLITRK4-202ENST00000356928 3074 ntAPPRIS P1 TSL 2 BASIC5.26□□□□□ -1.57
CUEDC1Q9NWM3 PNPLA4-203ENST00000444736 2752 ntAPPRIS P1 TSL 4 BASIC5.26□□□□□ -1.57
CUEDC1Q9NWM3 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC5.26□□□□□ -1.57
CUEDC1Q9NWM3 EMSY-206ENST00000525038 4376 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
CUEDC1Q9NWM3 RBBP8P1-201ENST00000449447 1844 ntBASIC5.25□□□□□ -1.57
CUEDC1Q9NWM3 LINC00989-201ENST00000508174 2080 ntTSL 3 BASIC5.25□□□□□ -1.57
CUEDC1Q9NWM3 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC5.25□□□□□ -1.57
CUEDC1Q9NWM3 AC083899.1-201ENST00000454465 3819 ntBASIC5.25□□□□□ -1.57
CUEDC1Q9NWM3 Y_RNA.82-201ENST00000363000 102 ntBASIC5.25□□□□□ -1.57
CUEDC1Q9NWM3 Y_RNA.92-201ENST00000363043 102 ntBASIC5.25□□□□□ -1.57
CUEDC1Q9NWM3 Y_RNA.235-201ENST00000364412 102 ntBASIC5.25□□□□□ -1.57
CUEDC1Q9NWM3 RNA5SP205-201ENST00000364653 136 ntBASIC5.25□□□□□ -1.57
CUEDC1Q9NWM3 Y_RNA.306-201ENST00000365015 102 ntBASIC5.25□□□□□ -1.57
CUEDC1Q9NWM3 Y_RNA.312-201ENST00000365089 102 ntBASIC5.25□□□□□ -1.57
CUEDC1Q9NWM3 Y_RNA.322-201ENST00000365151 102 ntBASIC5.25□□□□□ -1.57
CUEDC1Q9NWM3 RNA5SP167-201ENST00000365461 116 ntBASIC5.25□□□□□ -1.57
CUEDC1Q9NWM3 MIR521-1-201ENST00000384902 87 ntBASIC5.25□□□□□ -1.57
CUEDC1Q9NWM3 TRAJ38-201ENST00000390499 62 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
CUEDC1Q9NWM3 SNORD78.2-201ENST00000391076 69 ntBASIC5.25□□□□□ -1.57
CUEDC1Q9NWM3 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC5.25□□□□□ -1.57
CUEDC1Q9NWM3 AL353621.1-201ENST00000418219 243 ntBASIC5.25□□□□□ -1.57
CUEDC1Q9NWM3 AL035461.1-201ENST00000421490 332 ntBASIC5.25□□□□□ -1.57
CUEDC1Q9NWM3 NDUFB4P8-201ENST00000435351 367 ntBASIC5.25□□□□□ -1.57
CUEDC1Q9NWM3 AC004938.1-201ENST00000438468 308 ntBASIC5.25□□□□□ -1.57
CUEDC1Q9NWM3 LINC01496-201ENST00000448761 460 ntTSL 5 BASIC5.25□□□□□ -1.57
CUEDC1Q9NWM3 Y_RNA.650-201ENST00000459002 102 ntBASIC5.25□□□□□ -1.57
CUEDC1Q9NWM3 Y_RNA.638-201ENST00000459374 113 ntBASIC5.25□□□□□ -1.57
CUEDC1Q9NWM3 RN7SL51P-201ENST00000468230 285 ntBASIC5.25□□□□□ -1.57
CUEDC1Q9NWM3 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC5.25□□□□□ -1.57
CUEDC1Q9NWM3 AC140059.1-201ENST00000489238 361 ntBASIC5.25□□□□□ -1.57
CUEDC1Q9NWM3 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
CUEDC1Q9NWM3 AC079226.2-201ENST00000509283 518 ntTSL 2 BASIC5.25□□□□□ -1.57
CUEDC1Q9NWM3 SNORA31.3-201ENST00000516029 96 ntBASIC5.25□□□□□ -1.57
CUEDC1Q9NWM3 RNU6-1012P-201ENST00000516606 109 ntBASIC5.25□□□□□ -1.57
CUEDC1Q9NWM3 Y_RNA.777-201ENST00000516982 102 ntBASIC5.25□□□□□ -1.57
CUEDC1Q9NWM3 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC5.25□□□□□ -1.57
CUEDC1Q9NWM3 LINC00871-201ENST00000555246 408 ntTSL 5 BASIC5.25□□□□□ -1.57
CUEDC1Q9NWM3 AC090457.1-201ENST00000579775 211 ntTSL 3 BASIC5.25□□□□□ -1.57
CUEDC1Q9NWM3 MIR548AC-201ENST00000585049 88 ntBASIC5.25□□□□□ -1.57
CUEDC1Q9NWM3 Y_RNA.771-201ENST00000598668 102 ntBASIC5.25□□□□□ -1.57
CUEDC1Q9NWM3 AP000787.2-201ENST00000604432 568 ntBASIC5.25□□□□□ -1.57
CUEDC1Q9NWM3 AL139124.1-201ENST00000609123 421 ntBASIC5.25□□□□□ -1.57
CUEDC1Q9NWM3 MIR6133-201ENST00000617057 108 ntBASIC5.25□□□□□ -1.57
CUEDC1Q9NWM3 Y_RNA.789-201ENST00000622480 102 ntBASIC5.25□□□□□ -1.57
CUEDC1Q9NWM3 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC5.25□□□□□ -1.57
CUEDC1Q9NWM3 AC073869.8-201ENST00000641806 335 ntBASIC5.25□□□□□ -1.57
CUEDC1Q9NWM3 PLCB1-211ENST00000617005 6458 ntTSL 5 BASIC5.25□□□□□ -1.57
CUEDC1Q9NWM3 RAB30-212ENST00000533486 9929 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
CUEDC1Q9NWM3 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
CUEDC1Q9NWM3 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC5.25□□□□□ -1.57
CUEDC1Q9NWM3 ARHGAP24-201ENST00000264343 4572 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
CUEDC1Q9NWM3 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
CUEDC1Q9NWM3 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC5.24□□□□□ -1.57
CUEDC1Q9NWM3 DPY19L2P2-203ENST00000435536 1858 ntBASIC5.24□□□□□ -1.57
CUEDC1Q9NWM3 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC5.24□□□□□ -1.57
CUEDC1Q9NWM3 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
CUEDC1Q9NWM3 GLRA2-202ENST00000355020 1730 ntAPPRIS ALT1 TSL 1 (best) BASIC5.24□□□□□ -1.57
CUEDC1Q9NWM3 MIR133B-201ENST00000362210 119 ntBASIC5.24□□□□□ -1.57
CUEDC1Q9NWM3 SNORA70.6-201ENST00000383934 134 ntBASIC5.24□□□□□ -1.57
CUEDC1Q9NWM3 MIR578-201ENST00000384828 96 ntBASIC5.24□□□□□ -1.57
CUEDC1Q9NWM3 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
CUEDC1Q9NWM3 AC119751.6-201ENST00000416712 186 ntBASIC5.24□□□□□ -1.57
CUEDC1Q9NWM3 SRSF1P1-201ENST00000424058 520 ntBASIC5.24□□□□□ -1.57
CUEDC1Q9NWM3 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC5.24□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 100.2 ms