Protein–RNA interactions for Protein: Q9NVP1

DDX18, ATP-dependent RNA helicase DDX18, humanhuman

Known RBP Predictions only

Length 670 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX18Q9NVP1 AL139344.1-201ENST00000605228 195 ntBASIC2.34□□□□□ -2.03
DDX18Q9NVP1 U4atac.1-201ENST00000618345 95 ntBASIC2.34□□□□□ -2.03
DDX18Q9NVP1 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC2.34□□□□□ -2.04
DDX18Q9NVP1 MTND5P29-201ENST00000458676 1807 ntBASIC2.33□□□□□ -2.04
DDX18Q9NVP1 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
DDX18Q9NVP1 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
DDX18Q9NVP1 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC2.33□□□□□ -2.04
DDX18Q9NVP1 AL596028.1-201ENST00000326971 197 ntBASIC2.33□□□□□ -2.04
DDX18Q9NVP1 RNA5SP456-201ENST00000364002 114 ntBASIC2.33□□□□□ -2.04
DDX18Q9NVP1 Y_RNA.548-201ENST00000384656 105 ntBASIC2.33□□□□□ -2.04
DDX18Q9NVP1 NDUFB4P4-201ENST00000404822 243 ntBASIC2.33□□□□□ -2.04
DDX18Q9NVP1 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC2.33□□□□□ -2.04
DDX18Q9NVP1 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC2.33□□□□□ -2.04
DDX18Q9NVP1 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC2.33□□□□□ -2.04
DDX18Q9NVP1 BX276092.3-201ENST00000424182 230 ntBASIC2.33□□□□□ -2.04
DDX18Q9NVP1 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC2.33□□□□□ -2.04
DDX18Q9NVP1 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC2.33□□□□□ -2.04
DDX18Q9NVP1 AC092625.1-201ENST00000442706 393 ntTSL 3 BASIC2.33□□□□□ -2.04
DDX18Q9NVP1 RNU7-136P-201ENST00000458819 69 ntBASIC2.33□□□□□ -2.04
DDX18Q9NVP1 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC2.33□□□□□ -2.04
DDX18Q9NVP1 DYNLL1P5-201ENST00000467158 270 ntBASIC2.33□□□□□ -2.04
DDX18Q9NVP1 RPL31P50-201ENST00000471002 296 ntBASIC2.33□□□□□ -2.04
DDX18Q9NVP1 AC104563.1-201ENST00000476147 376 ntBASIC2.33□□□□□ -2.04
DDX18Q9NVP1 RPL23AP45-201ENST00000476406 468 ntBASIC2.33□□□□□ -2.04
DDX18Q9NVP1 AC072039.1-201ENST00000477611 581 ntBASIC2.33□□□□□ -2.04
DDX18Q9NVP1 AC092902.1-201ENST00000486999 259 ntBASIC2.33□□□□□ -2.04
DDX18Q9NVP1 GTF2IP9-201ENST00000502460 301 ntBASIC2.33□□□□□ -2.04
DDX18Q9NVP1 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC2.33□□□□□ -2.04
DDX18Q9NVP1 LINC02173-201ENST00000504132 521 ntTSL 2 BASIC2.33□□□□□ -2.04
DDX18Q9NVP1 LINC01088-208ENST00000511895 795 ntTSL 2 BASIC2.33□□□□□ -2.04
DDX18Q9NVP1 RN7SKP31-201ENST00000516354 278 ntBASIC2.33□□□□□ -2.04
DDX18Q9NVP1 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC2.33□□□□□ -2.04
DDX18Q9NVP1 AC087897.1-201ENST00000550134 156 ntBASIC2.33□□□□□ -2.04
DDX18Q9NVP1 MRPS36P5-201ENST00000551909 298 ntBASIC2.33□□□□□ -2.04
DDX18Q9NVP1 AC024619.4-201ENST00000580924 316 ntBASIC2.33□□□□□ -2.04
DDX18Q9NVP1 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
DDX18Q9NVP1 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC2.32□□□□□ -2.04
DDX18Q9NVP1 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.32□□□□□ -2.04
DDX18Q9NVP1 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC2.32□□□□□ -2.04
DDX18Q9NVP1 OR6C76-201ENST00000328314 939 ntAPPRIS P1 BASIC2.32□□□□□ -2.04
DDX18Q9NVP1 MIR218-1-201ENST00000384999 110 ntBASIC2.32□□□□□ -2.04
DDX18Q9NVP1 RPA3-203ENST00000401447 414 ntTSL 3 BASIC2.32□□□□□ -2.04
DDX18Q9NVP1 HNRNPDLP1-201ENST00000412834 550 ntBASIC2.32□□□□□ -2.04
DDX18Q9NVP1 RPL17P12-201ENST00000413391 526 ntBASIC2.32□□□□□ -2.04
DDX18Q9NVP1 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC2.32□□□□□ -2.04
DDX18Q9NVP1 PSPHP1-201ENST00000450062 261 ntBASIC2.32□□□□□ -2.04
DDX18Q9NVP1 AL109933.2-201ENST00000452651 260 ntBASIC2.32□□□□□ -2.04
DDX18Q9NVP1 RPL18AP17-201ENST00000455326 198 ntBASIC2.32□□□□□ -2.04
DDX18Q9NVP1 KLF3P2-201ENST00000465138 268 ntBASIC2.32□□□□□ -2.04
DDX18Q9NVP1 RPL30P9-201ENST00000465586 330 ntBASIC2.32□□□□□ -2.04
DDX18Q9NVP1 AL121769.1-201ENST00000469473 401 ntBASIC2.32□□□□□ -2.04
DDX18Q9NVP1 AC108734.3-201ENST00000481241 1165 ntBASIC2.32□□□□□ -2.04
DDX18Q9NVP1 GZMAP1-201ENST00000503054 631 ntBASIC2.32□□□□□ -2.04
DDX18Q9NVP1 AC093801.2-201ENST00000503966 1050 ntBASIC2.32□□□□□ -2.04
DDX18Q9NVP1 SNORA31.6-201ENST00000516241 130 ntBASIC2.32□□□□□ -2.04
DDX18Q9NVP1 RNA5SP320-201ENST00000516263 124 ntBASIC2.32□□□□□ -2.04
DDX18Q9NVP1 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.32□□□□□ -2.04
DDX18Q9NVP1 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC2.32□□□□□ -2.04
DDX18Q9NVP1 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC2.32□□□□□ -2.04
DDX18Q9NVP1 AP003497.1-201ENST00000528472 562 ntBASIC2.32□□□□□ -2.04
DDX18Q9NVP1 AC087894.1-201ENST00000538359 518 ntBASIC2.32□□□□□ -2.04
DDX18Q9NVP1 OR6C7P-201ENST00000547875 934 ntBASIC2.32□□□□□ -2.04
DDX18Q9NVP1 AC078814.3-201ENST00000553036 491 ntBASIC2.32□□□□□ -2.04
DDX18Q9NVP1 AC105245.1-201ENST00000581934 244 ntBASIC2.32□□□□□ -2.04
DDX18Q9NVP1 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC2.32□□□□□ -2.04
DDX18Q9NVP1 AC097717.1-211ENST00000600604 687 ntTSL 5 BASIC2.32□□□□□ -2.04
DDX18Q9NVP1 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC2.32□□□□□ -2.04
DDX18Q9NVP1 AC023158.2-201ENST00000614876 543 ntBASIC2.32□□□□□ -2.04
DDX18Q9NVP1 U4.3-201ENST00000621047 82 ntBASIC2.32□□□□□ -2.04
DDX18Q9NVP1 AP003485.2-201ENST00000623636 610 ntBASIC2.32□□□□□ -2.04
DDX18Q9NVP1 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC2.32□□□□□ -2.04
DDX18Q9NVP1 HSPA8P4-201ENST00000511877 1920 ntBASIC2.32□□□□□ -2.04
DDX18Q9NVP1 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC2.32□□□□□ -2.04
DDX18Q9NVP1 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
DDX18Q9NVP1 Y_RNA.245-201ENST00000364493 95 ntBASIC2.31□□□□□ -2.04
DDX18Q9NVP1 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC2.31□□□□□ -2.04
DDX18Q9NVP1 RNU1-39P-201ENST00000383897 165 ntBASIC2.31□□□□□ -2.04
DDX18Q9NVP1 RNU1-73P-201ENST00000383971 164 ntBASIC2.31□□□□□ -2.04
DDX18Q9NVP1 RNU6-1207P-201ENST00000384343 107 ntBASIC2.31□□□□□ -2.04
DDX18Q9NVP1 SNORA51.11-201ENST00000384442 131 ntBASIC2.31□□□□□ -2.04
DDX18Q9NVP1 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC2.31□□□□□ -2.04
DDX18Q9NVP1 RN7SKP158-201ENST00000410453 326 ntBASIC2.31□□□□□ -2.04
DDX18Q9NVP1 RNA5SP270-201ENST00000411361 118 ntBASIC2.31□□□□□ -2.04
DDX18Q9NVP1 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC2.31□□□□□ -2.04
DDX18Q9NVP1 AC098826.1-201ENST00000433943 471 ntBASIC2.31□□□□□ -2.04
DDX18Q9NVP1 NANOGP2-201ENST00000435391 727 ntBASIC2.31□□□□□ -2.04
DDX18Q9NVP1 AL157387.1-201ENST00000436077 335 ntTSL 2 BASIC2.31□□□□□ -2.04
DDX18Q9NVP1 GPM6BP3-201ENST00000442797 145 ntBASIC2.31□□□□□ -2.04
DDX18Q9NVP1 AL513328.1-201ENST00000446460 224 ntBASIC2.31□□□□□ -2.04
DDX18Q9NVP1 AC004924.1-201ENST00000480160 781 ntBASIC2.31□□□□□ -2.04
DDX18Q9NVP1 RPS27P21-201ENST00000486977 252 ntBASIC2.31□□□□□ -2.04
DDX18Q9NVP1 LINC02066-201ENST00000492731 580 ntTSL 4 BASIC2.31□□□□□ -2.04
DDX18Q9NVP1 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
DDX18Q9NVP1 RNU7-193P-201ENST00000516723 65 ntBASIC2.31□□□□□ -2.04
DDX18Q9NVP1 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC2.31□□□□□ -2.04
DDX18Q9NVP1 MIR4765-201ENST00000585007 77 ntBASIC2.31□□□□□ -2.04
DDX18Q9NVP1 AC008277.1-203ENST00000594921 1149 ntTSL 5 BASIC2.31□□□□□ -2.04
DDX18Q9NVP1 MTATP6P2-201ENST00000603319 678 ntBASIC2.31□□□□□ -2.04
DDX18Q9NVP1 TUG1_2.1-201ENST00000614234 87 ntBASIC2.31□□□□□ -2.04
DDX18Q9NVP1 AP003485.1-201ENST00000625093 753 ntBASIC2.31□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 96.8 ms