Protein–RNA interactions for Protein: Q9NUP9

LIN7C, Protein lin-7 homolog C, humanhuman

Known RBP Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7CQ9NUP9 AC012181.1-201ENST00000479895 423 ntBASIC3.4□□□□□ -1.87
LIN7CQ9NUP9 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC3.4□□□□□ -1.87
LIN7CQ9NUP9 MTND4P7-201ENST00000523876 130 ntBASIC3.4□□□□□ -1.87
LIN7CQ9NUP9 AP003122.3-201ENST00000526316 255 ntBASIC3.4□□□□□ -1.87
LIN7CQ9NUP9 AC084851.1-201ENST00000529105 249 ntBASIC3.4□□□□□ -1.87
LIN7CQ9NUP9 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC3.4□□□□□ -1.87
LIN7CQ9NUP9 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC3.4□□□□□ -1.87
LIN7CQ9NUP9 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC3.4□□□□□ -1.87
LIN7CQ9NUP9 MDM2-233ENST00000545204 398 ntTSL 5 BASIC3.4□□□□□ -1.87
LIN7CQ9NUP9 ARL6IP1P1-201ENST00000545836 610 ntBASIC3.4□□□□□ -1.87
LIN7CQ9NUP9 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC3.4□□□□□ -1.87
LIN7CQ9NUP9 MTCO3P24-201ENST00000572729 782 ntBASIC3.4□□□□□ -1.87
LIN7CQ9NUP9 MIR1273C-201ENST00000578669 77 ntBASIC3.4□□□□□ -1.87
LIN7CQ9NUP9 MIR4424-201ENST00000585257 86 ntBASIC3.4□□□□□ -1.87
LIN7CQ9NUP9 TTN-AS1-222ENST00000587576 399 ntTSL 3 BASIC3.4□□□□□ -1.87
LIN7CQ9NUP9 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
LIN7CQ9NUP9 AC004520.1-201ENST00000608362 1413 ntBASIC3.4□□□□□ -1.87
LIN7CQ9NUP9 AC114781.5-201ENST00000615297 108 ntBASIC3.4□□□□□ -1.87
LIN7CQ9NUP9 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC3.4□□□□□ -1.87
LIN7CQ9NUP9 AC011944.2-201ENST00000624440 683 ntBASIC3.4□□□□□ -1.87
LIN7CQ9NUP9 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC3.4□□□□□ -1.87
LIN7CQ9NUP9 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.87
LIN7CQ9NUP9 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
LIN7CQ9NUP9 AP001148.1-201ENST00000624124 2359 ntBASIC3.4□□□□□ -1.87
LIN7CQ9NUP9 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
LIN7CQ9NUP9 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.87
LIN7CQ9NUP9 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.87
LIN7CQ9NUP9 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
LIN7CQ9NUP9 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC3.39□□□□□ -1.87
LIN7CQ9NUP9 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC3.39□□□□□ -1.87
LIN7CQ9NUP9 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
LIN7CQ9NUP9 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
LIN7CQ9NUP9 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC3.39□□□□□ -1.87
LIN7CQ9NUP9 AL359693.1-201ENST00000614959 2407 ntBASIC3.39□□□□□ -1.87
LIN7CQ9NUP9 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC3.39□□□□□ -1.87
LIN7CQ9NUP9 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC3.39□□□□□ -1.87
LIN7CQ9NUP9 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
LIN7CQ9NUP9 MIR383-201ENST00000362257 73 ntBASIC3.39□□□□□ -1.87
LIN7CQ9NUP9 RNA5SP295-201ENST00000362655 121 ntBASIC3.39□□□□□ -1.87
LIN7CQ9NUP9 RNU6-715P-201ENST00000365204 103 ntBASIC3.39□□□□□ -1.87
LIN7CQ9NUP9 SNORA62-201ENST00000365493 153 ntBASIC3.39□□□□□ -1.87
LIN7CQ9NUP9 RNU6-38P-201ENST00000384085 107 ntBASIC3.39□□□□□ -1.87
LIN7CQ9NUP9 RNU6-1127P-201ENST00000384580 107 ntBASIC3.39□□□□□ -1.87
LIN7CQ9NUP9 CD3D-202ENST00000392884 476 ntTSL 2 BASIC3.39□□□□□ -1.87
LIN7CQ9NUP9 MIR1251-201ENST00000408552 70 ntBASIC3.39□□□□□ -1.87
LIN7CQ9NUP9 RPL23AP26-201ENST00000412728 464 ntBASIC3.39□□□□□ -1.87
LIN7CQ9NUP9 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC3.39□□□□□ -1.87
LIN7CQ9NUP9 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC3.39□□□□□ -1.87
LIN7CQ9NUP9 AL158156.1-201ENST00000422509 473 ntBASIC3.39□□□□□ -1.87
LIN7CQ9NUP9 AC011742.1-201ENST00000431448 434 ntBASIC3.39□□□□□ -1.87
LIN7CQ9NUP9 HMGB1P31-201ENST00000437242 427 ntBASIC3.39□□□□□ -1.87
LIN7CQ9NUP9 CALM1P1-201ENST00000442082 433 ntBASIC3.39□□□□□ -1.87
LIN7CQ9NUP9 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC3.39□□□□□ -1.87
LIN7CQ9NUP9 RNU6-333P-201ENST00000459117 107 ntBASIC3.39□□□□□ -1.87
LIN7CQ9NUP9 RPL21P41-201ENST00000459863 264 ntBASIC3.39□□□□□ -1.87
LIN7CQ9NUP9 RPS23P7-201ENST00000466210 444 ntBASIC3.39□□□□□ -1.87
LIN7CQ9NUP9 RN7SL271P-201ENST00000487601 295 ntBASIC3.39□□□□□ -1.87
LIN7CQ9NUP9 AC091167.1-201ENST00000492017 396 ntBASIC3.39□□□□□ -1.87
LIN7CQ9NUP9 AC139453.3-201ENST00000493276 369 ntBASIC3.39□□□□□ -1.87
LIN7CQ9NUP9 RN7SL691P-201ENST00000494487 301 ntBASIC3.39□□□□□ -1.87
LIN7CQ9NUP9 RPL31P61-201ENST00000496160 376 ntBASIC3.39□□□□□ -1.87
LIN7CQ9NUP9 RPL38P4-201ENST00000502376 214 ntBASIC3.39□□□□□ -1.87
LIN7CQ9NUP9 NAF1-205ENST00000509434 385 ntTSL 3 BASIC3.39□□□□□ -1.87
LIN7CQ9NUP9 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC3.39□□□□□ -1.87
LIN7CQ9NUP9 AC008958.1-201ENST00000511047 682 ntBASIC3.39□□□□□ -1.87
LIN7CQ9NUP9 RNU4ATAC6P-201ENST00000516592 126 ntBASIC3.39□□□□□ -1.87
LIN7CQ9NUP9 TRAV8-5-201ENST00000537369 341 ntBASIC3.39□□□□□ -1.87
LIN7CQ9NUP9 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC3.39□□□□□ -1.87
LIN7CQ9NUP9 AL157871.3-201ENST00000557231 293 ntBASIC3.39□□□□□ -1.87
LIN7CQ9NUP9 TVP23BP1-201ENST00000557500 617 ntBASIC3.39□□□□□ -1.87
LIN7CQ9NUP9 MIR3609-201ENST00000582661 80 ntBASIC3.39□□□□□ -1.87
LIN7CQ9NUP9 AL035413.2-201ENST00000604801 525 ntBASIC3.39□□□□□ -1.87
LIN7CQ9NUP9 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC3.39□□□□□ -1.87
LIN7CQ9NUP9 FTX_3.1-201ENST00000610451 147 ntBASIC3.39□□□□□ -1.87
LIN7CQ9NUP9 MIR486-1-201ENST00000612171 68 ntBASIC3.39□□□□□ -1.87
LIN7CQ9NUP9 AL445363.3-201ENST00000623080 671 ntBASIC3.39□□□□□ -1.87
LIN7CQ9NUP9 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC3.39□□□□□ -1.87
LIN7CQ9NUP9 MIR3653-201ENST00000625572 110 ntBASIC3.39□□□□□ -1.87
LIN7CQ9NUP9 CCT7-217ENST00000626868 249 ntTSL 5 BASIC3.39□□□□□ -1.87
LIN7CQ9NUP9 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
LIN7CQ9NUP9 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC3.39□□□□□ -1.87
LIN7CQ9NUP9 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.39□□□□□ -1.87
LIN7CQ9NUP9 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
LIN7CQ9NUP9 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC3.39□□□□□ -1.87
LIN7CQ9NUP9 AC066616.2-201ENST00000559334 1481 ntBASIC3.39□□□□□ -1.87
LIN7CQ9NUP9 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC3.39□□□□□ -1.87
LIN7CQ9NUP9 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC3.39□□□□□ -1.87
LIN7CQ9NUP9 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC3.39□□□□□ -1.87
LIN7CQ9NUP9 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC3.38□□□□□ -1.87
LIN7CQ9NUP9 AL136164.4-201ENST00000625013 2135 ntBASIC3.38□□□□□ -1.87
LIN7CQ9NUP9 AC022336.2-201ENST00000568966 2538 ntBASIC3.38□□□□□ -1.87
LIN7CQ9NUP9 IPO8P1-201ENST00000455509 3109 ntBASIC3.38□□□□□ -1.87
LIN7CQ9NUP9 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
LIN7CQ9NUP9 AC007256.1-201ENST00000392253 2765 ntBASIC3.38□□□□□ -1.87
LIN7CQ9NUP9 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC3.38□□□□□ -1.87
LIN7CQ9NUP9 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC3.38□□□□□ -1.87
LIN7CQ9NUP9 RNU6-270P-201ENST00000364131 105 ntBASIC3.38□□□□□ -1.87
LIN7CQ9NUP9 RNU6-371P-201ENST00000364283 108 ntBASIC3.38□□□□□ -1.87
LIN7CQ9NUP9 RNU1-132P-201ENST00000364300 164 ntBASIC3.38□□□□□ -1.87
LIN7CQ9NUP9 RNU6-1035P-201ENST00000384477 107 ntBASIC3.38□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 104.2 ms