Protein–RNA interactions for Protein: Q9NP66

HMG20A, High mobility group protein 20A, humanhuman

Predictions only

Length 347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20AQ9NP66 AC008739.2-201ENST00000597006 317 ntBASIC2.18□□□□□ -2.06
HMG20AQ9NP66 AC024563.1-202ENST00000597533 419 ntTSL 3 BASIC2.18□□□□□ -2.06
HMG20AQ9NP66 AC022145.1-201ENST00000600673 383 ntTSL 3 BASIC2.18□□□□□ -2.06
HMG20AQ9NP66 AL357094.1-201ENST00000603845 844 ntBASIC2.18□□□□□ -2.06
HMG20AQ9NP66 AL031281.1-201ENST00000604049 488 ntBASIC2.18□□□□□ -2.06
HMG20AQ9NP66 AC013244.3-201ENST00000605614 388 ntBASIC2.18□□□□□ -2.06
HMG20AQ9NP66 AC103710.4-201ENST00000609301 899 ntBASIC2.18□□□□□ -2.06
HMG20AQ9NP66 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC2.18□□□□□ -2.06
HMG20AQ9NP66 AC019226.1-201ENST00000625666 515 ntBASIC2.18□□□□□ -2.06
HMG20AQ9NP66 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.18□□□□□ -2.06
HMG20AQ9NP66 AC103706.2-201ENST00000638080 240 ntBASIC2.18□□□□□ -2.06
HMG20AQ9NP66 ZNF833P-201ENST00000424938 1494 ntBASIC2.18□□□□□ -2.06
HMG20AQ9NP66 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC2.18□□□□□ -2.06
HMG20AQ9NP66 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.18□□□□□ -2.06
HMG20AQ9NP66 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.18□□□□□ -2.06
HMG20AQ9NP66 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC2.17□□□□□ -2.06
HMG20AQ9NP66 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC2.17□□□□□ -2.06
HMG20AQ9NP66 SNORD113-6-201ENST00000363345 75 ntBASIC2.17□□□□□ -2.06
HMG20AQ9NP66 RNA5SP456-201ENST00000364002 114 ntBASIC2.17□□□□□ -2.06
HMG20AQ9NP66 RNA5SP387-201ENST00000364226 106 ntBASIC2.17□□□□□ -2.06
HMG20AQ9NP66 Y_RNA.333-201ENST00000365274 102 ntBASIC2.17□□□□□ -2.06
HMG20AQ9NP66 CCNG1P1-201ENST00000406783 885 ntBASIC2.17□□□□□ -2.06
HMG20AQ9NP66 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC2.17□□□□□ -2.06
HMG20AQ9NP66 RNU6-516P-201ENST00000411381 104 ntBASIC2.17□□□□□ -2.06
HMG20AQ9NP66 MTCO1P17-201ENST00000411522 491 ntBASIC2.17□□□□□ -2.06
HMG20AQ9NP66 HMGB3P2-201ENST00000411913 584 ntBASIC2.17□□□□□ -2.06
HMG20AQ9NP66 NDUFB4P7-201ENST00000423198 363 ntBASIC2.17□□□□□ -2.06
HMG20AQ9NP66 GRM7-AS3-203ENST00000424366 486 ntTSL 3 BASIC2.17□□□□□ -2.06
HMG20AQ9NP66 MTND1P20-201ENST00000430341 950 ntBASIC2.17□□□□□ -2.06
HMG20AQ9NP66 TAAR7P-201ENST00000436141 242 ntBASIC2.17□□□□□ -2.06
HMG20AQ9NP66 CYCSP32-201ENST00000440548 321 ntBASIC2.17□□□□□ -2.06
HMG20AQ9NP66 TPT1P14-201ENST00000448018 505 ntBASIC2.17□□□□□ -2.06
HMG20AQ9NP66 ZNF736P8Y-201ENST00000451913 669 ntBASIC2.17□□□□□ -2.06
HMG20AQ9NP66 MTND2P24-201ENST00000453434 806 ntBASIC2.17□□□□□ -2.06
HMG20AQ9NP66 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC2.17□□□□□ -2.06
HMG20AQ9NP66 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC2.17□□□□□ -2.06
HMG20AQ9NP66 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC2.17□□□□□ -2.06
HMG20AQ9NP66 AL356270.1-201ENST00000456587 522 ntTSL 3 BASIC2.17□□□□□ -2.06
HMG20AQ9NP66 ATG12P2-201ENST00000456830 416 ntBASIC2.17□□□□□ -2.06
HMG20AQ9NP66 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC2.17□□□□□ -2.06
HMG20AQ9NP66 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC2.17□□□□□ -2.06
HMG20AQ9NP66 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
HMG20AQ9NP66 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC2.17□□□□□ -2.06
HMG20AQ9NP66 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC2.17□□□□□ -2.06
HMG20AQ9NP66 AC104685.1-201ENST00000502445 371 ntBASIC2.17□□□□□ -2.06
HMG20AQ9NP66 LINC02465-201ENST00000507099 532 ntTSL 4 BASIC2.17□□□□□ -2.06
HMG20AQ9NP66 LTV1P1-201ENST00000510683 1237 ntBASIC2.17□□□□□ -2.06
HMG20AQ9NP66 LINC01216-201ENST00000515728 824 ntTSL 5 BASIC2.17□□□□□ -2.06
HMG20AQ9NP66 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC2.17□□□□□ -2.06
HMG20AQ9NP66 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC2.17□□□□□ -2.06
HMG20AQ9NP66 AC013828.2-201ENST00000532487 235 ntBASIC2.17□□□□□ -2.06
HMG20AQ9NP66 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC2.17□□□□□ -2.06
HMG20AQ9NP66 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC2.17□□□□□ -2.06
HMG20AQ9NP66 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC2.17□□□□□ -2.06
HMG20AQ9NP66 ANKRD36BP2-206ENST00000575193 1245 ntBASIC2.17□□□□□ -2.06
HMG20AQ9NP66 GLUD1P4-201ENST00000590914 418 ntBASIC2.17□□□□□ -2.06
HMG20AQ9NP66 AL139344.1-201ENST00000605228 195 ntBASIC2.17□□□□□ -2.06
HMG20AQ9NP66 BCRP9-201ENST00000605312 388 ntBASIC2.17□□□□□ -2.06
HMG20AQ9NP66 AL121917.1-203ENST00000605534 577 ntBASIC2.17□□□□□ -2.06
HMG20AQ9NP66 AC112204.3-201ENST00000623822 332 ntBASIC2.17□□□□□ -2.06
HMG20AQ9NP66 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC2.17□□□□□ -2.06
HMG20AQ9NP66 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC2.17□□□□□ -2.06
HMG20AQ9NP66 MTND4P16-201ENST00000466108 1367 ntBASIC2.17□□□□□ -2.06
HMG20AQ9NP66 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC2.17□□□□□ -2.06
HMG20AQ9NP66 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
HMG20AQ9NP66 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.17□□□□□ -2.06
HMG20AQ9NP66 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC2.17□□□□□ -2.06
HMG20AQ9NP66 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
HMG20AQ9NP66 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC2.16□□□□□ -2.06
HMG20AQ9NP66 IL33-203ENST00000456383 2501 ntTSL 5 BASIC2.16□□□□□ -2.06
HMG20AQ9NP66 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC2.16□□□□□ -2.06
HMG20AQ9NP66 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC2.16□□□□□ -2.06
HMG20AQ9NP66 SNORD62.1-201ENST00000362541 86 ntBASIC2.16□□□□□ -2.06
HMG20AQ9NP66 RNU6-859P-201ENST00000362728 107 ntBASIC2.16□□□□□ -2.06
HMG20AQ9NP66 RNU6-931P-201ENST00000363850 107 ntBASIC2.16□□□□□ -2.06
HMG20AQ9NP66 SET-203ENST00000372688 801 ntTSL 2 BASIC2.16□□□□□ -2.06
HMG20AQ9NP66 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC2.16□□□□□ -2.06
HMG20AQ9NP66 RNU6-1200P-201ENST00000384162 107 ntBASIC2.16□□□□□ -2.06
HMG20AQ9NP66 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC2.16□□□□□ -2.06
HMG20AQ9NP66 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC2.16□□□□□ -2.06
HMG20AQ9NP66 GYG2-AS1-201ENST00000445107 515 ntTSL 5 BASIC2.16□□□□□ -2.06
HMG20AQ9NP66 AC009237.8-201ENST00000445492 379 ntBASIC2.16□□□□□ -2.06
HMG20AQ9NP66 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC2.16□□□□□ -2.06
HMG20AQ9NP66 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC2.16□□□□□ -2.06
HMG20AQ9NP66 snoU13.28-201ENST00000459235 104 ntBASIC2.16□□□□□ -2.06
HMG20AQ9NP66 RPS15AP36-201ENST00000492022 382 ntBASIC2.16□□□□□ -2.06
HMG20AQ9NP66 RPL30P5-201ENST00000494923 336 ntBASIC2.16□□□□□ -2.06
HMG20AQ9NP66 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC2.16□□□□□ -2.06
HMG20AQ9NP66 AC093809.1-201ENST00000509155 340 ntBASIC2.16□□□□□ -2.06
HMG20AQ9NP66 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC2.16□□□□□ -2.06
HMG20AQ9NP66 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.16□□□□□ -2.06
HMG20AQ9NP66 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC2.16□□□□□ -2.06
HMG20AQ9NP66 RN7SKP132-201ENST00000516001 208 ntBASIC2.16□□□□□ -2.06
HMG20AQ9NP66 RNA5SP471-201ENST00000516971 106 ntBASIC2.16□□□□□ -2.06
HMG20AQ9NP66 IGHVII-62-1-201ENST00000519283 235 ntBASIC2.16□□□□□ -2.06
HMG20AQ9NP66 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC2.16□□□□□ -2.06
HMG20AQ9NP66 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
HMG20AQ9NP66 AP000889.2-201ENST00000532684 490 ntBASIC2.16□□□□□ -2.06
HMG20AQ9NP66 AC243972.3-201ENST00000539655 198 ntBASIC2.16□□□□□ -2.06
HMG20AQ9NP66 ERP27-202ENST00000540097 993 ntTSL 2 BASIC2.16□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 139.3 ms