Protein–RNA interactions for Protein: Q9H4D5

NXF3, Nuclear RNA export factor 3, humanhuman

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NXF3Q9H4D5 AC006378.2-201ENST00000623178 2476 ntBASIC2.59□□□□□ -2
NXF3Q9H4D5 AL022578.1-201ENST00000439330 1433 ntBASIC2.59□□□□□ -2
NXF3Q9H4D5 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC2.58□□□□□ -2
NXF3Q9H4D5 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
NXF3Q9H4D5 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC2.58□□□□□ -2
NXF3Q9H4D5 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC2.58□□□□□ -2
NXF3Q9H4D5 SNORA70B-201ENST00000384210 135 ntBASIC2.58□□□□□ -2
NXF3Q9H4D5 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC2.58□□□□□ -2
NXF3Q9H4D5 AL356131.1-201ENST00000405826 414 ntBASIC2.58□□□□□ -2
NXF3Q9H4D5 RNU2-43P-201ENST00000410306 190 ntBASIC2.58□□□□□ -2
NXF3Q9H4D5 RNU2-25P-201ENST00000411041 191 ntBASIC2.58□□□□□ -2
NXF3Q9H4D5 CCDC58P2-201ENST00000417131 366 ntBASIC2.58□□□□□ -2
NXF3Q9H4D5 Z98742.3-201ENST00000418637 326 ntBASIC2.58□□□□□ -2
NXF3Q9H4D5 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC2.58□□□□□ -2
NXF3Q9H4D5 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC2.58□□□□□ -2
NXF3Q9H4D5 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.58□□□□□ -2
NXF3Q9H4D5 AC098826.1-201ENST00000433943 471 ntBASIC2.58□□□□□ -2
NXF3Q9H4D5 NDUFB4P6-201ENST00000436819 366 ntBASIC2.58□□□□□ -2
NXF3Q9H4D5 AL354941.1-201ENST00000438600 464 ntBASIC2.58□□□□□ -2
NXF3Q9H4D5 MTCYBP3-201ENST00000445588 1137 ntBASIC2.58□□□□□ -2
NXF3Q9H4D5 EEF1E1P1-201ENST00000446998 430 ntBASIC2.58□□□□□ -2
NXF3Q9H4D5 AC234775.1-201ENST00000454247 670 ntBASIC2.58□□□□□ -2
NXF3Q9H4D5 AL359385.1-201ENST00000456509 365 ntBASIC2.58□□□□□ -2
NXF3Q9H4D5 AC092798.1-201ENST00000458542 409 ntBASIC2.58□□□□□ -2
NXF3Q9H4D5 MEMO1P3-201ENST00000459811 302 ntBASIC2.58□□□□□ -2
NXF3Q9H4D5 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC2.58□□□□□ -2
NXF3Q9H4D5 CBX3P3-201ENST00000508108 532 ntBASIC2.58□□□□□ -2
NXF3Q9H4D5 RNA5SP216-201ENST00000516111 123 ntBASIC2.58□□□□□ -2
NXF3Q9H4D5 RNU6-150P-201ENST00000516237 95 ntBASIC2.58□□□□□ -2
NXF3Q9H4D5 RNA5SP281-201ENST00000516504 135 ntBASIC2.58□□□□□ -2
NXF3Q9H4D5 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC2.58□□□□□ -2
NXF3Q9H4D5 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC2.58□□□□□ -2
NXF3Q9H4D5 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC2.58□□□□□ -2
NXF3Q9H4D5 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC2.58□□□□□ -2
NXF3Q9H4D5 HMGB1P14-201ENST00000557424 591 ntBASIC2.58□□□□□ -2
NXF3Q9H4D5 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC2.58□□□□□ -2
NXF3Q9H4D5 MYL12B-204ENST00000584539 1064 ntAPPRIS P1 TSL 3 BASIC2.58□□□□□ -2
NXF3Q9H4D5 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC2.58□□□□□ -2
NXF3Q9H4D5 AL390208.1-201ENST00000605885 644 ntBASIC2.58□□□□□ -2
NXF3Q9H4D5 AL596245.1-201ENST00000618994 362 ntBASIC2.58□□□□□ -2
NXF3Q9H4D5 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC2.58□□□□□ -2
NXF3Q9H4D5 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC2.58□□□□□ -2
NXF3Q9H4D5 AC011477.1-204ENST00000623416 1325 ntBASIC2.58□□□□□ -2
NXF3Q9H4D5 Z82195.2-201ENST00000612348 18351 ntBASIC2.58□□□□□ -2
NXF3Q9H4D5 AC009812.4-201ENST00000569134 1805 ntBASIC2.58□□□□□ -2
NXF3Q9H4D5 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC2.58□□□□□ -2
NXF3Q9H4D5 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.58□□□□□ -2
NXF3Q9H4D5 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.58□□□□□ -2
NXF3Q9H4D5 ZNF519P1-201ENST00000449011 1626 ntBASIC2.57□□□□□ -2
NXF3Q9H4D5 FRG1BP-201ENST00000278882 761 ntBASIC2.57□□□□□ -2
NXF3Q9H4D5 RNU6-462P-201ENST00000362659 105 ntBASIC2.57□□□□□ -2
NXF3Q9H4D5 RNU6-1200P-201ENST00000384162 107 ntBASIC2.57□□□□□ -2
NXF3Q9H4D5 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.57□□□□□ -2
NXF3Q9H4D5 AC107081.1-201ENST00000414975 361 ntBASIC2.57□□□□□ -2
NXF3Q9H4D5 AL161909.2-201ENST00000417577 409 ntTSL 5 BASIC2.57□□□□□ -2
NXF3Q9H4D5 AL022400.1-201ENST00000423946 935 ntBASIC2.57□□□□□ -2
NXF3Q9H4D5 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC2.57□□□□□ -2
NXF3Q9H4D5 MTND5P14-201ENST00000441481 1267 ntBASIC2.57□□□□□ -2
NXF3Q9H4D5 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC2.57□□□□□ -2
NXF3Q9H4D5 AL353691.1-201ENST00000451332 387 ntBASIC2.57□□□□□ -2
NXF3Q9H4D5 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC2.57□□□□□ -2
NXF3Q9H4D5 AHI1-208ENST00000488690 712 ntTSL 5 BASIC2.57□□□□□ -2
NXF3Q9H4D5 AIG1P1-201ENST00000503376 148 ntBASIC2.57□□□□□ -2
NXF3Q9H4D5 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC2.57□□□□□ -2
NXF3Q9H4D5 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC2.57□□□□□ -2
NXF3Q9H4D5 HSPE1P23-201ENST00000509838 286 ntBASIC2.57□□□□□ -2
NXF3Q9H4D5 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC2.57□□□□□ -2
NXF3Q9H4D5 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC2.57□□□□□ -2
NXF3Q9H4D5 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC2.57□□□□□ -2
NXF3Q9H4D5 AC026407.1-201ENST00000518369 204 ntBASIC2.57□□□□□ -2
NXF3Q9H4D5 MTATP6P15-201ENST00000527233 835 ntBASIC2.57□□□□□ -2
NXF3Q9H4D5 DUXAP5-201ENST00000529668 529 ntBASIC2.57□□□□□ -2
NXF3Q9H4D5 MAL2-203ENST00000534619 578 ntTSL 4 BASIC2.57□□□□□ -2
NXF3Q9H4D5 AL161757.2-201ENST00000553800 421 ntTSL 3 BASIC2.57□□□□□ -2
NXF3Q9H4D5 AC090888.2-201ENST00000559765 1144 ntBASIC2.57□□□□□ -2
NXF3Q9H4D5 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC2.57□□□□□ -2
NXF3Q9H4D5 AC090616.5-201ENST00000581225 299 ntTSL 5 BASIC2.57□□□□□ -2
NXF3Q9H4D5 NDUFV2-AS1-202ENST00000583081 399 ntTSL 5 BASIC2.57□□□□□ -2
NXF3Q9H4D5 RNU6-88P-201ENST00000606801 100 ntBASIC2.57□□□□□ -2
NXF3Q9H4D5 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC2.57□□□□□ -2
NXF3Q9H4D5 AC103706.2-201ENST00000638080 240 ntBASIC2.57□□□□□ -2
NXF3Q9H4D5 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC2.57□□□□□ -2
NXF3Q9H4D5 TPTE2P4-201ENST00000258589 1605 ntBASIC2.57□□□□□ -2
NXF3Q9H4D5 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC2.56□□□□□ -2
NXF3Q9H4D5 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
NXF3Q9H4D5 RNU6-28P-201ENST00000362378 107 ntBASIC2.56□□□□□ -2
NXF3Q9H4D5 VTRNA1-1-201ENST00000363120 99 ntBASIC2.56□□□□□ -2
NXF3Q9H4D5 RNU6-343P-201ENST00000364709 104 ntBASIC2.56□□□□□ -2
NXF3Q9H4D5 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC2.56□□□□□ -2
NXF3Q9H4D5 RNU5A-2P-201ENST00000384337 116 ntBASIC2.56□□□□□ -2
NXF3Q9H4D5 SNORA41-201ENST00000384675 132 ntBASIC2.56□□□□□ -2
NXF3Q9H4D5 AL356057.2-201ENST00000403318 432 ntBASIC2.56□□□□□ -2
NXF3Q9H4D5 AC098592.1-201ENST00000419352 333 ntBASIC2.56□□□□□ -2
NXF3Q9H4D5 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC2.56□□□□□ -2
NXF3Q9H4D5 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC2.56□□□□□ -2
NXF3Q9H4D5 MTCYBP45-201ENST00000435243 565 ntBASIC2.56□□□□□ -2
NXF3Q9H4D5 UBE2D3P1-201ENST00000436669 444 ntBASIC2.56□□□□□ -2
NXF3Q9H4D5 SNRPEP7-201ENST00000438350 220 ntBASIC2.56□□□□□ -2
NXF3Q9H4D5 SDCBPP1-201ENST00000440192 890 ntBASIC2.56□□□□□ -2
NXF3Q9H4D5 RAC1P7-201ENST00000445367 377 ntBASIC2.56□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 138.2 ms