Protein–RNA interactions for Protein: Q9H211

CDT1, DNA replication factor Cdt1, humanhuman

Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1Q9H211 AC132479.1-201ENST00000449160 144 ntBASIC3.59□□□□□ -1.83
CDT1Q9H211 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC3.59□□□□□ -1.83
CDT1Q9H211 RN7SL807P-201ENST00000470923 297 ntBASIC3.59□□□□□ -1.83
CDT1Q9H211 AC078785.3-201ENST00000476607 425 ntBASIC3.59□□□□□ -1.83
CDT1Q9H211 RPS4XP13-201ENST00000483219 789 ntBASIC3.59□□□□□ -1.83
CDT1Q9H211 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC3.59□□□□□ -1.83
CDT1Q9H211 RPL7P47-201ENST00000497299 556 ntBASIC3.59□□□□□ -1.83
CDT1Q9H211 AC135721.1-201ENST00000497954 479 ntBASIC3.59□□□□□ -1.83
CDT1Q9H211 AC021146.1-201ENST00000511202 716 ntBASIC3.59□□□□□ -1.83
CDT1Q9H211 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC3.59□□□□□ -1.83
CDT1Q9H211 SNORA74D-201ENST00000516404 141 ntBASIC3.59□□□□□ -1.83
CDT1Q9H211 Vault.3-201ENST00000516676 95 ntBASIC3.59□□□□□ -1.83
CDT1Q9H211 RNU6-445P-201ENST00000516949 107 ntBASIC3.59□□□□□ -1.83
CDT1Q9H211 RNU6-1220P-201ENST00000517126 108 ntBASIC3.59□□□□□ -1.83
CDT1Q9H211 DEFB108D-201ENST00000527787 222 ntBASIC3.59□□□□□ -1.83
CDT1Q9H211 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC3.59□□□□□ -1.83
CDT1Q9H211 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC3.59□□□□□ -1.83
CDT1Q9H211 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC3.59□□□□□ -1.83
CDT1Q9H211 AL133153.1-201ENST00000557756 303 ntBASIC3.59□□□□□ -1.83
CDT1Q9H211 HMGB1P33-201ENST00000563485 527 ntBASIC3.59□□□□□ -1.83
CDT1Q9H211 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC3.59□□□□□ -1.83
CDT1Q9H211 MIR3167-201ENST00000579623 85 ntBASIC3.59□□□□□ -1.83
CDT1Q9H211 MIR4298-201ENST00000584380 73 ntBASIC3.59□□□□□ -1.83
CDT1Q9H211 AC006504.3-201ENST00000586818 523 ntBASIC3.59□□□□□ -1.83
CDT1Q9H211 AC110741.2-201ENST00000605278 268 ntBASIC3.59□□□□□ -1.83
CDT1Q9H211 YPEL5P2-201ENST00000605553 359 ntBASIC3.59□□□□□ -1.83
CDT1Q9H211 AC009994.1-201ENST00000606889 253 ntBASIC3.59□□□□□ -1.83
CDT1Q9H211 AC004908.2-201ENST00000609090 574 ntBASIC3.59□□□□□ -1.83
CDT1Q9H211 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC3.59□□□□□ -1.83
CDT1Q9H211 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC3.59□□□□□ -1.83
CDT1Q9H211 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC3.59□□□□□ -1.83
CDT1Q9H211 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.59□□□□□ -1.83
CDT1Q9H211 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC3.59□□□□□ -1.83
CDT1Q9H211 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC3.59□□□□□ -1.84
CDT1Q9H211 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC3.59□□□□□ -1.84
CDT1Q9H211 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
CDT1Q9H211 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC3.58□□□□□ -1.84
CDT1Q9H211 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC3.58□□□□□ -1.84
CDT1Q9H211 AP001148.1-201ENST00000624124 2359 ntBASIC3.58□□□□□ -1.84
CDT1Q9H211 Y_RNA.1-201ENST00000352915 104 ntBASIC3.58□□□□□ -1.84
CDT1Q9H211 Y_RNA.159-201ENST00000363674 87 ntBASIC3.58□□□□□ -1.84
CDT1Q9H211 RNU6-534P-201ENST00000364877 106 ntBASIC3.58□□□□□ -1.84
CDT1Q9H211 Y_RNA.402-201ENST00000383972 102 ntBASIC3.58□□□□□ -1.84
CDT1Q9H211 RNU6-1074P-201ENST00000383995 104 ntBASIC3.58□□□□□ -1.84
CDT1Q9H211 RNU6-432P-201ENST00000384196 109 ntBASIC3.58□□□□□ -1.84
CDT1Q9H211 MT-TL1-201ENST00000386347 75 ntBASIC3.58□□□□□ -1.84
CDT1Q9H211 U3.19-201ENST00000390893 196 ntBASIC3.58□□□□□ -1.84
CDT1Q9H211 FGF7P8-201ENST00000402994 292 ntBASIC3.58□□□□□ -1.84
CDT1Q9H211 RPS3AP24-201ENST00000407896 734 ntBASIC3.58□□□□□ -1.84
CDT1Q9H211 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.58□□□□□ -1.84
CDT1Q9H211 MTCO3P12-201ENST00000416718 547 ntBASIC3.58□□□□□ -1.84
CDT1Q9H211 MTND3P17-201ENST00000416968 344 ntBASIC3.58□□□□□ -1.84
CDT1Q9H211 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC3.58□□□□□ -1.84
CDT1Q9H211 MTCO1P20-201ENST00000425366 358 ntBASIC3.58□□□□□ -1.84
CDT1Q9H211 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC3.58□□□□□ -1.84
CDT1Q9H211 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC3.58□□□□□ -1.84
CDT1Q9H211 DCLRE1CP1-201ENST00000454630 470 ntBASIC3.58□□□□□ -1.84
CDT1Q9H211 AL359385.1-201ENST00000456509 365 ntBASIC3.58□□□□□ -1.84
CDT1Q9H211 AC010285.1-201ENST00000470580 392 ntBASIC3.58□□□□□ -1.84
CDT1Q9H211 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC3.58□□□□□ -1.84
CDT1Q9H211 VN1R17P-201ENST00000472048 1090 ntBASIC3.58□□□□□ -1.84
CDT1Q9H211 AC021205.2-201ENST00000480069 347 ntBASIC3.58□□□□□ -1.84
CDT1Q9H211 RPS29P25-201ENST00000481709 171 ntBASIC3.58□□□□□ -1.84
CDT1Q9H211 THAP6-203ENST00000502620 582 ntTSL 3 BASIC3.58□□□□□ -1.84
CDT1Q9H211 HMGB1P29-201ENST00000505659 499 ntBASIC3.58□□□□□ -1.84
CDT1Q9H211 AC105914.1-201ENST00000511798 226 ntBASIC3.58□□□□□ -1.84
CDT1Q9H211 AC114797.1-201ENST00000514003 728 ntBASIC3.58□□□□□ -1.84
CDT1Q9H211 RNA5SP337-201ENST00000517007 109 ntBASIC3.58□□□□□ -1.84
CDT1Q9H211 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC3.58□□□□□ -1.84
CDT1Q9H211 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC3.58□□□□□ -1.84
CDT1Q9H211 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC3.58□□□□□ -1.84
CDT1Q9H211 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC3.58□□□□□ -1.84
CDT1Q9H211 HIGD1AP1-201ENST00000550979 275 ntBASIC3.58□□□□□ -1.84
CDT1Q9H211 AC125611.2-201ENST00000551907 647 ntBASIC3.58□□□□□ -1.84
CDT1Q9H211 TGIF1P1-201ENST00000558095 802 ntBASIC3.58□□□□□ -1.84
CDT1Q9H211 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC3.58□□□□□ -1.84
CDT1Q9H211 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC3.58□□□□□ -1.84
CDT1Q9H211 MIR98-201ENST00000606724 119 ntBASIC3.58□□□□□ -1.84
CDT1Q9H211 uc_338.12-201ENST00000616344 181 ntBASIC3.58□□□□□ -1.84
CDT1Q9H211 SNORD39.4-201ENST00000620099 78 ntBASIC3.58□□□□□ -1.84
CDT1Q9H211 AC104985.2-201ENST00000620598 500 ntBASIC3.58□□□□□ -1.84
CDT1Q9H211 SRP54-214ENST00000630962 162 ntTSL 5 BASIC3.58□□□□□ -1.84
CDT1Q9H211 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC3.58□□□□□ -1.84
CDT1Q9H211 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC3.58□□□□□ -1.84
CDT1Q9H211 AC073544.1-201ENST00000600110 1595 ntBASIC3.58□□□□□ -1.84
CDT1Q9H211 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
CDT1Q9H211 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
CDT1Q9H211 OR1S2-201ENST00000302592 978 ntBASIC3.57□□□□□ -1.84
CDT1Q9H211 MIR30E-201ENST00000362104 92 ntBASIC3.57□□□□□ -1.84
CDT1Q9H211 Y_RNA.89-201ENST00000363031 102 ntBASIC3.57□□□□□ -1.84
CDT1Q9H211 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
CDT1Q9H211 SNORA20.2-201ENST00000383922 131 ntBASIC3.57□□□□□ -1.84
CDT1Q9H211 RNU6-278P-201ENST00000390945 109 ntBASIC3.57□□□□□ -1.84
CDT1Q9H211 AC068050.1-201ENST00000394891 380 ntBASIC3.57□□□□□ -1.84
CDT1Q9H211 RNU2-43P-201ENST00000410306 190 ntBASIC3.57□□□□□ -1.84
CDT1Q9H211 RNA5SP229-201ENST00000410809 99 ntBASIC3.57□□□□□ -1.84
CDT1Q9H211 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC3.57□□□□□ -1.84
CDT1Q9H211 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC3.57□□□□□ -1.84
CDT1Q9H211 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC3.57□□□□□ -1.84
CDT1Q9H211 VDAC1P3-201ENST00000434069 851 ntBASIC3.57□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 83.1 ms