Protein–RNA interactions for Protein: Q9H0S4

DDX47, Probable ATP-dependent RNA helicase DDX47, humanhuman

Known RBP Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX47Q9H0S4 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.82□□□□□ -1.96
DDX47Q9H0S4 AC000403.1-201ENST00000613696 3585 ntBASIC2.82□□□□□ -1.96
DDX47Q9H0S4 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC2.81□□□□□ -1.96
DDX47Q9H0S4 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC2.81□□□□□ -1.96
DDX47Q9H0S4 MIR483-201ENST00000385070 76 ntBASIC2.81□□□□□ -1.96
DDX47Q9H0S4 MIR767-201ENST00000390228 109 ntBASIC2.81□□□□□ -1.96
DDX47Q9H0S4 RNA5SP210-201ENST00000391034 120 ntBASIC2.81□□□□□ -1.96
DDX47Q9H0S4 AL359634.1-202ENST00000404721 284 ntBASIC2.81□□□□□ -1.96
DDX47Q9H0S4 ZRANB2-AS2-201ENST00000411721 518 ntTSL 3 BASIC2.81□□□□□ -1.96
DDX47Q9H0S4 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC2.81□□□□□ -1.96
DDX47Q9H0S4 AC010153.1-201ENST00000432862 727 ntBASIC2.81□□□□□ -1.96
DDX47Q9H0S4 RPS20P5-201ENST00000434808 360 ntBASIC2.81□□□□□ -1.96
DDX47Q9H0S4 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC2.81□□□□□ -1.96
DDX47Q9H0S4 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC2.81□□□□□ -1.96
DDX47Q9H0S4 Z96811.1-201ENST00000445880 108 ntBASIC2.81□□□□□ -1.96
DDX47Q9H0S4 CACYBPP2-201ENST00000453625 678 ntBASIC2.81□□□□□ -1.96
DDX47Q9H0S4 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
DDX47Q9H0S4 AC009901.1-201ENST00000506703 541 ntBASIC2.81□□□□□ -1.96
DDX47Q9H0S4 MEF2C-AS1-208ENST00000512585 741 ntTSL 5 BASIC2.81□□□□□ -1.96
DDX47Q9H0S4 RN7SKP265-201ENST00000516448 223 ntBASIC2.81□□□□□ -1.96
DDX47Q9H0S4 RNU6-64P-201ENST00000517119 105 ntBASIC2.81□□□□□ -1.96
DDX47Q9H0S4 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC2.81□□□□□ -1.96
DDX47Q9H0S4 HMGB1P41-201ENST00000520234 440 ntBASIC2.81□□□□□ -1.96
DDX47Q9H0S4 ZFPM2-AS1-204ENST00000520433 748 ntTSL 3 BASIC2.81□□□□□ -1.96
DDX47Q9H0S4 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC2.81□□□□□ -1.96
DDX47Q9H0S4 AC093012.1-202ENST00000549403 582 ntBASIC2.81□□□□□ -1.96
DDX47Q9H0S4 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC2.81□□□□□ -1.96
DDX47Q9H0S4 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC2.81□□□□□ -1.96
DDX47Q9H0S4 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC2.81□□□□□ -1.96
DDX47Q9H0S4 AC010546.1-201ENST00000569391 485 ntBASIC2.81□□□□□ -1.96
DDX47Q9H0S4 MIR4307-201ENST00000582802 84 ntBASIC2.81□□□□□ -1.96
DDX47Q9H0S4 MIR4293-201ENST00000584305 78 ntBASIC2.81□□□□□ -1.96
DDX47Q9H0S4 SOX2-OT-224ENST00000595313 716 ntTSL 5 BASIC2.81□□□□□ -1.96
DDX47Q9H0S4 RPL23AP78-201ENST00000599928 470 ntBASIC2.81□□□□□ -1.96
DDX47Q9H0S4 DPPA3P3-201ENST00000603842 430 ntBASIC2.81□□□□□ -1.96
DDX47Q9H0S4 ATP5A1P2-202ENST00000616464 443 ntBASIC2.81□□□□□ -1.96
DDX47Q9H0S4 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
DDX47Q9H0S4 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC2.81□□□□□ -1.96
DDX47Q9H0S4 AC009487.2-201ENST00000420969 6821 ntBASIC2.81□□□□□ -1.96
DDX47Q9H0S4 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC2.8□□□□□ -1.96
DDX47Q9H0S4 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC2.8□□□□□ -1.96
DDX47Q9H0S4 PAPPA-AS1-201ENST00000445861 2450 ntBASIC2.8□□□□□ -1.96
DDX47Q9H0S4 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC2.8□□□□□ -1.96
DDX47Q9H0S4 AC138915.1-201ENST00000565427 1685 ntBASIC2.8□□□□□ -1.96
DDX47Q9H0S4 ZNF519P1-201ENST00000449011 1626 ntBASIC2.8□□□□□ -1.96
DDX47Q9H0S4 MT-ND2-201ENST00000361453 1042 ntAPPRIS P1 BASIC2.8□□□□□ -1.96
DDX47Q9H0S4 RNU6-1214P-201ENST00000363650 109 ntBASIC2.8□□□□□ -1.96
DDX47Q9H0S4 RNU5A-8P-201ENST00000364102 114 ntBASIC2.8□□□□□ -1.96
DDX47Q9H0S4 AC078974.1-201ENST00000411597 223 ntBASIC2.8□□□□□ -1.96
DDX47Q9H0S4 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC2.8□□□□□ -1.96
DDX47Q9H0S4 MTND2P9-201ENST00000422293 931 ntBASIC2.8□□□□□ -1.96
DDX47Q9H0S4 AC244035.1-201ENST00000430042 390 ntBASIC2.8□□□□□ -1.96
DDX47Q9H0S4 RAB6C-AS1-202ENST00000433431 123 ntBASIC2.8□□□□□ -1.96
DDX47Q9H0S4 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC2.8□□□□□ -1.96
DDX47Q9H0S4 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC2.8□□□□□ -1.96
DDX47Q9H0S4 AC013267.1-201ENST00000458227 267 ntBASIC2.8□□□□□ -1.96
DDX47Q9H0S4 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC2.8□□□□□ -1.96
DDX47Q9H0S4 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
DDX47Q9H0S4 AC100870.1-201ENST00000522035 505 ntBASIC2.8□□□□□ -1.96
DDX47Q9H0S4 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC2.8□□□□□ -1.96
DDX47Q9H0S4 H3F3AP1-201ENST00000559984 334 ntBASIC2.8□□□□□ -1.96
DDX47Q9H0S4 AC234772.3-201ENST00000602277 528 ntBASIC2.8□□□□□ -1.96
DDX47Q9H0S4 AP000811.1-201ENST00000603803 651 ntBASIC2.8□□□□□ -1.96
DDX47Q9H0S4 AL035413.2-201ENST00000604801 525 ntBASIC2.8□□□□□ -1.96
DDX47Q9H0S4 MTND4LP5-201ENST00000605152 292 ntBASIC2.8□□□□□ -1.96
DDX47Q9H0S4 RPL23AP88-201ENST00000605759 454 ntBASIC2.8□□□□□ -1.96
DDX47Q9H0S4 AC239868.4-201ENST00000608318 671 ntBASIC2.8□□□□□ -1.96
DDX47Q9H0S4 AP000240.1-201ENST00000609910 452 ntBASIC2.8□□□□□ -1.96
DDX47Q9H0S4 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC2.8□□□□□ -1.96
DDX47Q9H0S4 SNHG22-203ENST00000617833 660 ntBASIC2.8□□□□□ -1.96
DDX47Q9H0S4 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC2.8□□□□□ -1.96
DDX47Q9H0S4 UCA1.1-201ENST00000620952 75 ntBASIC2.8□□□□□ -1.96
DDX47Q9H0S4 AC010297.1-201ENST00000623948 149 ntBASIC2.8□□□□□ -1.96
DDX47Q9H0S4 AL136313.1-201ENST00000624804 202 ntBASIC2.8□□□□□ -1.96
DDX47Q9H0S4 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC2.8□□□□□ -1.96
DDX47Q9H0S4 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC2.79□□□□□ -1.96
DDX47Q9H0S4 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC2.79□□□□□ -1.96
DDX47Q9H0S4 RNU6-660P-201ENST00000364566 109 ntBASIC2.79□□□□□ -1.96
DDX47Q9H0S4 RNU6-193P-201ENST00000410977 107 ntBASIC2.79□□□□□ -1.96
DDX47Q9H0S4 AL592148.1-201ENST00000413568 445 ntBASIC2.79□□□□□ -1.96
DDX47Q9H0S4 AC019064.1-201ENST00000414796 499 ntTSL 2 BASIC2.79□□□□□ -1.96
DDX47Q9H0S4 BTF3L4P3-201ENST00000418879 476 ntBASIC2.79□□□□□ -1.96
DDX47Q9H0S4 AC098592.1-201ENST00000419352 333 ntBASIC2.79□□□□□ -1.96
DDX47Q9H0S4 AL391069.1-201ENST00000422153 358 ntTSL 3 BASIC2.79□□□□□ -1.96
DDX47Q9H0S4 GRM7-AS3-203ENST00000424366 486 ntTSL 3 BASIC2.79□□□□□ -1.96
DDX47Q9H0S4 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC2.79□□□□□ -1.96
DDX47Q9H0S4 MRPS17P3-201ENST00000465453 385 ntBASIC2.79□□□□□ -1.96
DDX47Q9H0S4 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC2.79□□□□□ -1.96
DDX47Q9H0S4 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC2.79□□□□□ -1.96
DDX47Q9H0S4 AC117522.3-201ENST00000507974 584 ntBASIC2.79□□□□□ -1.96
DDX47Q9H0S4 AC114786.4-201ENST00000508771 728 ntBASIC2.79□□□□□ -1.96
DDX47Q9H0S4 TEMN3-AS1-201ENST00000510211 401 ntTSL 3 BASIC2.79□□□□□ -1.96
DDX47Q9H0S4 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC2.79□□□□□ -1.96
DDX47Q9H0S4 AC114797.1-201ENST00000514003 728 ntBASIC2.79□□□□□ -1.96
DDX47Q9H0S4 RNA5SP290-201ENST00000517133 127 ntBASIC2.79□□□□□ -1.96
DDX47Q9H0S4 AC090136.1-201ENST00000520009 240 ntBASIC2.79□□□□□ -1.96
DDX47Q9H0S4 DEFB108A-201ENST00000530110 222 ntBASIC2.79□□□□□ -1.96
DDX47Q9H0S4 AP002404.1-201ENST00000532005 451 ntBASIC2.79□□□□□ -1.96
DDX47Q9H0S4 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC2.79□□□□□ -1.96
DDX47Q9H0S4 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 78.6 ms