Protein–RNA interactions for Protein: Q9GZS1

POLR1E, DNA-directed RNA polymerase I subunit RPA49, humanhuman

Known RBP Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1EQ9GZS1 RNU2-52P-201ENST00000410680 190 ntBASIC2.64□□□□□ -1.99
POLR1EQ9GZS1 RNA5SP184-201ENST00000411071 108 ntBASIC2.64□□□□□ -1.99
POLR1EQ9GZS1 AL354733.1-203ENST00000417672 495 ntTSL 5 BASIC2.64□□□□□ -1.99
POLR1EQ9GZS1 AL049637.1-201ENST00000424664 503 ntTSL 5 BASIC2.64□□□□□ -1.99
POLR1EQ9GZS1 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC2.64□□□□□ -1.99
POLR1EQ9GZS1 AC084290.1-201ENST00000434995 374 ntBASIC2.64□□□□□ -1.99
POLR1EQ9GZS1 GSAP-208ENST00000441833 737 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
POLR1EQ9GZS1 RPL7P18-201ENST00000478965 734 ntBASIC2.64□□□□□ -1.99
POLR1EQ9GZS1 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC2.64□□□□□ -1.99
POLR1EQ9GZS1 AC034222.1-201ENST00000494052 532 ntBASIC2.64□□□□□ -1.99
POLR1EQ9GZS1 GTF2IP9-201ENST00000502460 301 ntBASIC2.64□□□□□ -1.99
POLR1EQ9GZS1 AC093297.1-201ENST00000511712 591 ntTSL 4 BASIC2.64□□□□□ -1.99
POLR1EQ9GZS1 AC110760.3-202ENST00000515177 371 ntBASIC2.64□□□□□ -1.99
POLR1EQ9GZS1 RNA5SP290-201ENST00000517133 127 ntBASIC2.64□□□□□ -1.99
POLR1EQ9GZS1 XIRP2-AS1-201ENST00000525330 776 ntTSL 3 BASIC2.64□□□□□ -1.99
POLR1EQ9GZS1 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC2.64□□□□□ -1.99
POLR1EQ9GZS1 AC239868.4-201ENST00000608318 671 ntBASIC2.64□□□□□ -1.99
POLR1EQ9GZS1 AC013470.4-201ENST00000619978 986 ntBASIC2.64□□□□□ -1.99
POLR1EQ9GZS1 PSMD5-AS1-215ENST00000640622 205 ntBASIC2.64□□□□□ -1.99
POLR1EQ9GZS1 AC009902.3-201ENST00000606235 2172 ntBASIC2.64□□□□□ -1.99
POLR1EQ9GZS1 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
POLR1EQ9GZS1 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.63□□□□□ -1.99
POLR1EQ9GZS1 RNA5SP393-201ENST00000363423 117 ntBASIC2.63□□□□□ -1.99
POLR1EQ9GZS1 RN7SKP226-201ENST00000364912 300 ntBASIC2.63□□□□□ -1.99
POLR1EQ9GZS1 RNU6-584P-201ENST00000410350 95 ntBASIC2.63□□□□□ -1.99
POLR1EQ9GZS1 SSR1P2-201ENST00000415208 787 ntBASIC2.63□□□□□ -1.99
POLR1EQ9GZS1 USP9YP13-201ENST00000417797 480 ntBASIC2.63□□□□□ -1.99
POLR1EQ9GZS1 BTF3L4P3-201ENST00000418879 476 ntBASIC2.63□□□□□ -1.99
POLR1EQ9GZS1 AC083875.1-201ENST00000419509 405 ntBASIC2.63□□□□□ -1.99
POLR1EQ9GZS1 NUP35P1-201ENST00000422734 947 ntBASIC2.63□□□□□ -1.99
POLR1EQ9GZS1 SUMO1P4-201ENST00000429430 302 ntBASIC2.63□□□□□ -1.99
POLR1EQ9GZS1 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC2.63□□□□□ -1.99
POLR1EQ9GZS1 AL117351.1-201ENST00000438864 766 ntBASIC2.63□□□□□ -1.99
POLR1EQ9GZS1 MTND3P1-201ENST00000441336 220 ntBASIC2.63□□□□□ -1.99
POLR1EQ9GZS1 MTCO3P45-201ENST00000443036 613 ntBASIC2.63□□□□□ -1.99
POLR1EQ9GZS1 TPT1P14-201ENST00000448018 505 ntBASIC2.63□□□□□ -1.99
POLR1EQ9GZS1 AC009961.3-201ENST00000449832 765 ntBASIC2.63□□□□□ -1.99
POLR1EQ9GZS1 CACYBPP2-201ENST00000453625 678 ntBASIC2.63□□□□□ -1.99
POLR1EQ9GZS1 GRM7-AS3-208ENST00000455623 947 ntTSL 3 BASIC2.63□□□□□ -1.99
POLR1EQ9GZS1 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC2.63□□□□□ -1.99
POLR1EQ9GZS1 AC008481.1-201ENST00000463278 396 ntBASIC2.63□□□□□ -1.99
POLR1EQ9GZS1 AC004924.1-201ENST00000480160 781 ntBASIC2.63□□□□□ -1.99
POLR1EQ9GZS1 RPL9P33-201ENST00000484311 566 ntBASIC2.63□□□□□ -1.99
POLR1EQ9GZS1 AHI1-208ENST00000488690 712 ntTSL 5 BASIC2.63□□□□□ -1.99
POLR1EQ9GZS1 RPS29P20-201ENST00000489592 171 ntBASIC2.63□□□□□ -1.99
POLR1EQ9GZS1 EIF4EP3-201ENST00000498782 656 ntBASIC2.63□□□□□ -1.99
POLR1EQ9GZS1 UBA6-AS1-204ENST00000502758 547 ntTSL 4 BASIC2.63□□□□□ -1.99
POLR1EQ9GZS1 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC2.63□□□□□ -1.99
POLR1EQ9GZS1 AC091951.3-201ENST00000504093 246 ntBASIC2.63□□□□□ -1.99
POLR1EQ9GZS1 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC2.63□□□□□ -1.99
POLR1EQ9GZS1 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC2.63□□□□□ -1.99
POLR1EQ9GZS1 RNU6ATAC13P-201ENST00000516152 131 ntBASIC2.63□□□□□ -1.99
POLR1EQ9GZS1 SNORA31.15-201ENST00000516771 132 ntBASIC2.63□□□□□ -1.99
POLR1EQ9GZS1 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC2.63□□□□□ -1.99
POLR1EQ9GZS1 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC2.63□□□□□ -1.99
POLR1EQ9GZS1 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC2.63□□□□□ -1.99
POLR1EQ9GZS1 ELOCP31-201ENST00000540463 467 ntBASIC2.63□□□□□ -1.99
POLR1EQ9GZS1 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.63□□□□□ -1.99
POLR1EQ9GZS1 LINC01481-201ENST00000552998 629 ntTSL 2 BASIC2.63□□□□□ -1.99
POLR1EQ9GZS1 LINC02274-201ENST00000555539 1174 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
POLR1EQ9GZS1 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC2.63□□□□□ -1.99
POLR1EQ9GZS1 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC2.63□□□□□ -1.99
POLR1EQ9GZS1 AL031716.1-201ENST00000569106 530 ntTSL 5 BASIC2.63□□□□□ -1.99
POLR1EQ9GZS1 AC060771.1-201ENST00000582031 164 ntBASIC2.63□□□□□ -1.99
POLR1EQ9GZS1 MIR5194-201ENST00000582634 120 ntBASIC2.63□□□□□ -1.99
POLR1EQ9GZS1 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC2.63□□□□□ -1.99
POLR1EQ9GZS1 AL158042.1-201ENST00000605338 460 ntBASIC2.63□□□□□ -1.99
POLR1EQ9GZS1 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC2.63□□□□□ -1.99
POLR1EQ9GZS1 AC144521.1-201ENST00000607148 956 ntBASIC2.63□□□□□ -1.99
POLR1EQ9GZS1 BX664608.1-201ENST00000610519 487 ntBASIC2.63□□□□□ -1.99
POLR1EQ9GZS1 AC013562.2-201ENST00000611632 603 ntBASIC2.63□□□□□ -1.99
POLR1EQ9GZS1 AP000484.1-201ENST00000620067 1252 ntBASIC2.63□□□□□ -1.99
POLR1EQ9GZS1 PCMTD1P7-201ENST00000634506 357 ntBASIC2.63□□□□□ -1.99
POLR1EQ9GZS1 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC2.63□□□□□ -1.99
POLR1EQ9GZS1 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
POLR1EQ9GZS1 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.63□□□□□ -1.99
POLR1EQ9GZS1 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC2.62□□□□□ -1.99
POLR1EQ9GZS1 SPINT4-201ENST00000279058 512 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
POLR1EQ9GZS1 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC2.62□□□□□ -1.99
POLR1EQ9GZS1 DEFB112-201ENST00000322246 342 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
POLR1EQ9GZS1 RNA5SP210-201ENST00000391034 120 ntBASIC2.62□□□□□ -1.99
POLR1EQ9GZS1 AL139039.1-201ENST00000401900 692 ntBASIC2.62□□□□□ -1.99
POLR1EQ9GZS1 CCNG1P1-201ENST00000406783 885 ntBASIC2.62□□□□□ -1.99
POLR1EQ9GZS1 RNU6-757P-201ENST00000410334 100 ntBASIC2.62□□□□□ -1.99
POLR1EQ9GZS1 MTCO1P17-201ENST00000411522 491 ntBASIC2.62□□□□□ -1.99
POLR1EQ9GZS1 TRBV24OR9-2-201ENST00000416632 435 ntBASIC2.62□□□□□ -1.99
POLR1EQ9GZS1 USP9YP20-201ENST00000419224 558 ntBASIC2.62□□□□□ -1.99
POLR1EQ9GZS1 ST13P20-201ENST00000447996 1065 ntBASIC2.62□□□□□ -1.99
POLR1EQ9GZS1 AC091212.1-201ENST00000474798 395 ntTSL 5 BASIC2.62□□□□□ -1.99
POLR1EQ9GZS1 LINC02201-201ENST00000508992 468 ntTSL 2 BASIC2.62□□□□□ -1.99
POLR1EQ9GZS1 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC2.62□□□□□ -1.99
POLR1EQ9GZS1 RNA5SP216-201ENST00000516111 123 ntBASIC2.62□□□□□ -1.99
POLR1EQ9GZS1 AC025881.1-201ENST00000518851 512 ntBASIC2.62□□□□□ -1.99
POLR1EQ9GZS1 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC2.62□□□□□ -1.99
POLR1EQ9GZS1 AC243972.3-201ENST00000539655 198 ntBASIC2.62□□□□□ -1.99
POLR1EQ9GZS1 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC2.62□□□□□ -1.99
POLR1EQ9GZS1 LINC02294-201ENST00000549330 497 ntTSL 2 BASIC2.62□□□□□ -1.99
POLR1EQ9GZS1 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC2.62□□□□□ -1.99
POLR1EQ9GZS1 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC2.62□□□□□ -1.99
POLR1EQ9GZS1 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC2.62□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 98 ms