Protein–RNA interactions for Protein: Q9C0C7

AMBRA1, Activating molecule in BECN1-regulated autophagy protein 1, humanhuman

Predictions only

Length 1,298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1Q9C0C7 AC103710.2-202ENST00000641454 2853 ntBASIC3.79□□□□□ -1.8
AMBRA1Q9C0C7 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
AMBRA1Q9C0C7 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
AMBRA1Q9C0C7 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
AMBRA1Q9C0C7 PNPT1P2-201ENST00000456768 2050 ntBASIC3.79□□□□□ -1.8
AMBRA1Q9C0C7 AL133412.1-201ENST00000380194 2992 ntBASIC3.78□□□□□ -1.8
AMBRA1Q9C0C7 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
AMBRA1Q9C0C7 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC3.78□□□□□ -1.8
AMBRA1Q9C0C7 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
AMBRA1Q9C0C7 Y_RNA.67-201ENST00000362870 100 ntBASIC3.78□□□□□ -1.8
AMBRA1Q9C0C7 Y_RNA.184-201ENST00000363884 108 ntBASIC3.78□□□□□ -1.8
AMBRA1Q9C0C7 Y_RNA.301-201ENST00000364990 103 ntBASIC3.78□□□□□ -1.8
AMBRA1Q9C0C7 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
AMBRA1Q9C0C7 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC3.78□□□□□ -1.8
AMBRA1Q9C0C7 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC3.78□□□□□ -1.8
AMBRA1Q9C0C7 AL022722.2-201ENST00000402519 180 ntBASIC3.78□□□□□ -1.8
AMBRA1Q9C0C7 RPL23AP26-201ENST00000412728 464 ntBASIC3.78□□□□□ -1.8
AMBRA1Q9C0C7 BX323014.1-201ENST00000412876 237 ntBASIC3.78□□□□□ -1.8
AMBRA1Q9C0C7 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC3.78□□□□□ -1.8
AMBRA1Q9C0C7 RPL7P2-201ENST00000427639 268 ntBASIC3.78□□□□□ -1.8
AMBRA1Q9C0C7 RPL23AP46-201ENST00000438548 490 ntBASIC3.78□□□□□ -1.8
AMBRA1Q9C0C7 AC006011.1-201ENST00000442758 349 ntBASIC3.78□□□□□ -1.8
AMBRA1Q9C0C7 AL645939.1-201ENST00000453429 797 ntBASIC3.78□□□□□ -1.8
AMBRA1Q9C0C7 snoU13.24-201ENST00000458998 104 ntBASIC3.78□□□□□ -1.8
AMBRA1Q9C0C7 SCARNA18-201ENST00000459004 134 ntBASIC3.78□□□□□ -1.8
AMBRA1Q9C0C7 RN7SL132P-201ENST00000478131 296 ntBASIC3.78□□□□□ -1.8
AMBRA1Q9C0C7 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC3.78□□□□□ -1.8
AMBRA1Q9C0C7 AC083904.1-201ENST00000487828 231 ntBASIC3.78□□□□□ -1.8
AMBRA1Q9C0C7 Y_RNA.654-201ENST00000497848 106 ntBASIC3.78□□□□□ -1.8
AMBRA1Q9C0C7 AC008958.1-201ENST00000511047 682 ntBASIC3.78□□□□□ -1.8
AMBRA1Q9C0C7 IL7R-208ENST00000511982 612 ntTSL 2 BASIC3.78□□□□□ -1.8
AMBRA1Q9C0C7 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC3.78□□□□□ -1.8
AMBRA1Q9C0C7 RNU6-352P-201ENST00000516908 107 ntBASIC3.78□□□□□ -1.8
AMBRA1Q9C0C7 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC3.78□□□□□ -1.8
AMBRA1Q9C0C7 AP003730.1-201ENST00000524605 285 ntBASIC3.78□□□□□ -1.8
AMBRA1Q9C0C7 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC3.78□□□□□ -1.8
AMBRA1Q9C0C7 NACA-211ENST00000548563 827 ntTSL 5 BASIC3.78□□□□□ -1.8
AMBRA1Q9C0C7 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC3.78□□□□□ -1.8
AMBRA1Q9C0C7 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC3.78□□□□□ -1.8
AMBRA1Q9C0C7 SNORD84-203ENST00000584275 78 ntBASIC3.78□□□□□ -1.8
AMBRA1Q9C0C7 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC3.78□□□□□ -1.8
AMBRA1Q9C0C7 AC008739.3-201ENST00000603262 127 ntBASIC3.78□□□□□ -1.8
AMBRA1Q9C0C7 AL670379.4-201ENST00000605279 254 ntBASIC3.78□□□□□ -1.8
AMBRA1Q9C0C7 AC092807.2-201ENST00000609367 243 ntBASIC3.78□□□□□ -1.8
AMBRA1Q9C0C7 AC064836.2-201ENST00000609491 462 ntBASIC3.78□□□□□ -1.8
AMBRA1Q9C0C7 AL365204.3-201ENST00000612448 685 ntBASIC3.78□□□□□ -1.8
AMBRA1Q9C0C7 SDR42E1P2-201ENST00000614861 481 ntBASIC3.78□□□□□ -1.8
AMBRA1Q9C0C7 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC3.78□□□□□ -1.8
AMBRA1Q9C0C7 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC3.78□□□□□ -1.8
AMBRA1Q9C0C7 AL353748.2-201ENST00000622148 471 ntBASIC3.78□□□□□ -1.8
AMBRA1Q9C0C7 C2orf27A-204ENST00000623058 969 ntBASIC3.78□□□□□ -1.8
AMBRA1Q9C0C7 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
AMBRA1Q9C0C7 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC3.78□□□□□ -1.8
AMBRA1Q9C0C7 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC3.78□□□□□ -1.81
AMBRA1Q9C0C7 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC3.78□□□□□ -1.81
AMBRA1Q9C0C7 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC3.77□□□□□ -1.81
AMBRA1Q9C0C7 LINC02471-203ENST00000641941 4752 ntBASIC3.77□□□□□ -1.81
AMBRA1Q9C0C7 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
AMBRA1Q9C0C7 Y_RNA.384-201ENST00000383909 102 ntBASIC3.77□□□□□ -1.81
AMBRA1Q9C0C7 RNU6-629P-201ENST00000384061 103 ntBASIC3.77□□□□□ -1.81
AMBRA1Q9C0C7 RNU6-1013P-201ENST00000384180 107 ntBASIC3.77□□□□□ -1.81
AMBRA1Q9C0C7 Y_RNA.474-201ENST00000384341 102 ntBASIC3.77□□□□□ -1.81
AMBRA1Q9C0C7 RNA5SP171-201ENST00000391071 115 ntBASIC3.77□□□□□ -1.81
AMBRA1Q9C0C7 EIF4EBP2P3-201ENST00000403144 334 ntBASIC3.77□□□□□ -1.81
AMBRA1Q9C0C7 AL592114.1-201ENST00000403842 483 ntBASIC3.77□□□□□ -1.81
AMBRA1Q9C0C7 RNA5SP44-201ENST00000410446 133 ntBASIC3.77□□□□□ -1.81
AMBRA1Q9C0C7 USP9YP20-201ENST00000419224 558 ntBASIC3.77□□□□□ -1.81
AMBRA1Q9C0C7 MTCO1P39-201ENST00000426148 480 ntBASIC3.77□□□□□ -1.81
AMBRA1Q9C0C7 AL358472.1-201ENST00000431295 329 ntBASIC3.77□□□□□ -1.81
AMBRA1Q9C0C7 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC3.77□□□□□ -1.81
AMBRA1Q9C0C7 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC3.77□□□□□ -1.81
AMBRA1Q9C0C7 RPL21P112-201ENST00000434403 463 ntBASIC3.77□□□□□ -1.81
AMBRA1Q9C0C7 RPL23AP83-201ENST00000434984 473 ntBASIC3.77□□□□□ -1.81
AMBRA1Q9C0C7 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC3.77□□□□□ -1.81
AMBRA1Q9C0C7 RPL7P28-201ENST00000437739 740 ntBASIC3.77□□□□□ -1.81
AMBRA1Q9C0C7 NEFMP1-201ENST00000443423 1006 ntBASIC3.77□□□□□ -1.81
AMBRA1Q9C0C7 PRPS1P1-201ENST00000445305 876 ntBASIC3.77□□□□□ -1.81
AMBRA1Q9C0C7 AC007677.1-201ENST00000445757 515 ntBASIC3.77□□□□□ -1.81
AMBRA1Q9C0C7 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC3.77□□□□□ -1.81
AMBRA1Q9C0C7 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC3.77□□□□□ -1.81
AMBRA1Q9C0C7 AC004801.2-202ENST00000463559 283 ntBASIC3.77□□□□□ -1.81
AMBRA1Q9C0C7 AC105137.1-201ENST00000484355 562 ntBASIC3.77□□□□□ -1.81
AMBRA1Q9C0C7 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC3.77□□□□□ -1.81
AMBRA1Q9C0C7 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC3.77□□□□□ -1.81
AMBRA1Q9C0C7 VN1R104P-201ENST00000505115 1009 ntBASIC3.77□□□□□ -1.81
AMBRA1Q9C0C7 CCDC34P1-201ENST00000507441 517 ntBASIC3.77□□□□□ -1.81
AMBRA1Q9C0C7 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
AMBRA1Q9C0C7 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC3.77□□□□□ -1.81
AMBRA1Q9C0C7 RNU6-123P-201ENST00000516163 102 ntBASIC3.77□□□□□ -1.81
AMBRA1Q9C0C7 Y_RNA.689-201ENST00000516589 107 ntBASIC3.77□□□□□ -1.81
AMBRA1Q9C0C7 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
AMBRA1Q9C0C7 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC3.77□□□□□ -1.81
AMBRA1Q9C0C7 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC3.77□□□□□ -1.81
AMBRA1Q9C0C7 AC022968.1-201ENST00000567372 442 ntBASIC3.77□□□□□ -1.81
AMBRA1Q9C0C7 MIR5583-1-201ENST00000580941 59 ntBASIC3.77□□□□□ -1.81
AMBRA1Q9C0C7 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC3.77□□□□□ -1.81
AMBRA1Q9C0C7 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC3.77□□□□□ -1.81
AMBRA1Q9C0C7 AC010928.3-201ENST00000587712 541 ntBASIC3.77□□□□□ -1.81
AMBRA1Q9C0C7 AC025946.2-201ENST00000603398 234 ntBASIC3.77□□□□□ -1.81
AMBRA1Q9C0C7 AL138889.2-201ENST00000603883 242 ntBASIC3.77□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 115.8 ms