Protein–RNA interactions for Protein: Q9BUZ4

TRAF4, TNF receptor-associated factor 4, humanhuman

Predicted RBP Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4Q9BUZ4 PLCE1P1-201ENST00000622094 305 ntBASIC3.09□□□□□ -1.91
TRAF4Q9BUZ4 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC3.09□□□□□ -1.91
TRAF4Q9BUZ4 AC084035.1-201ENST00000634543 607 ntBASIC3.09□□□□□ -1.91
TRAF4Q9BUZ4 MTND5P29-201ENST00000458676 1807 ntBASIC3.09□□□□□ -1.92
TRAF4Q9BUZ4 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.08□□□□□ -1.92
TRAF4Q9BUZ4 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
TRAF4Q9BUZ4 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
TRAF4Q9BUZ4 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
TRAF4Q9BUZ4 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
TRAF4Q9BUZ4 RNA5SP267-201ENST00000364893 126 ntBASIC3.08□□□□□ -1.92
TRAF4Q9BUZ4 RNU5E-6P-201ENST00000365574 115 ntBASIC3.08□□□□□ -1.92
TRAF4Q9BUZ4 RNU6-1103P-201ENST00000384150 107 ntBASIC3.08□□□□□ -1.92
TRAF4Q9BUZ4 Y_RNA.505-201ENST00000384489 102 ntBASIC3.08□□□□□ -1.92
TRAF4Q9BUZ4 MIR490-201ENST00000384865 128 ntBASIC3.08□□□□□ -1.92
TRAF4Q9BUZ4 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
TRAF4Q9BUZ4 RNA5SP129-201ENST00000410276 118 ntBASIC3.08□□□□□ -1.92
TRAF4Q9BUZ4 AC127391.1-201ENST00000411737 98 ntBASIC3.08□□□□□ -1.92
TRAF4Q9BUZ4 OFD1P1Y-201ENST00000411756 1225 ntBASIC3.08□□□□□ -1.92
TRAF4Q9BUZ4 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC3.08□□□□□ -1.92
TRAF4Q9BUZ4 HMGB3P20-201ENST00000417997 600 ntBASIC3.08□□□□□ -1.92
TRAF4Q9BUZ4 BX842559.1-201ENST00000419615 532 ntBASIC3.08□□□□□ -1.92
TRAF4Q9BUZ4 YPEL5P1-201ENST00000419731 367 ntBASIC3.08□□□□□ -1.92
TRAF4Q9BUZ4 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC3.08□□□□□ -1.92
TRAF4Q9BUZ4 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC3.08□□□□□ -1.92
TRAF4Q9BUZ4 MTCO2P11-201ENST00000431069 680 ntBASIC3.08□□□□□ -1.92
TRAF4Q9BUZ4 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC3.08□□□□□ -1.92
TRAF4Q9BUZ4 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC3.08□□□□□ -1.92
TRAF4Q9BUZ4 MTND1P34-201ENST00000438556 671 ntBASIC3.08□□□□□ -1.92
TRAF4Q9BUZ4 AL662791.1-201ENST00000441992 928 ntBASIC3.08□□□□□ -1.92
TRAF4Q9BUZ4 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC3.08□□□□□ -1.92
TRAF4Q9BUZ4 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC3.08□□□□□ -1.92
TRAF4Q9BUZ4 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC3.08□□□□□ -1.92
TRAF4Q9BUZ4 AC020550.1-201ENST00000447385 163 ntBASIC3.08□□□□□ -1.92
TRAF4Q9BUZ4 AC074327.1-201ENST00000448017 540 ntTSL 2 BASIC3.08□□□□□ -1.92
TRAF4Q9BUZ4 AC132479.1-201ENST00000449160 144 ntBASIC3.08□□□□□ -1.92
TRAF4Q9BUZ4 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC3.08□□□□□ -1.92
TRAF4Q9BUZ4 RBMY2UP-201ENST00000453474 324 ntBASIC3.08□□□□□ -1.92
TRAF4Q9BUZ4 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC3.08□□□□□ -1.92
TRAF4Q9BUZ4 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC3.08□□□□□ -1.92
TRAF4Q9BUZ4 RPS27AP1-201ENST00000475545 471 ntBASIC3.08□□□□□ -1.92
TRAF4Q9BUZ4 RPL32P34-201ENST00000486380 400 ntBASIC3.08□□□□□ -1.92
TRAF4Q9BUZ4 AC108078.1-201ENST00000508073 725 ntBASIC3.08□□□□□ -1.92
TRAF4Q9BUZ4 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC3.08□□□□□ -1.92
TRAF4Q9BUZ4 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC3.08□□□□□ -1.92
TRAF4Q9BUZ4 SNORA74D-201ENST00000516404 141 ntBASIC3.08□□□□□ -1.92
TRAF4Q9BUZ4 SCARNA15.2-201ENST00000516409 127 ntBASIC3.08□□□□□ -1.92
TRAF4Q9BUZ4 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC3.08□□□□□ -1.92
TRAF4Q9BUZ4 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC3.08□□□□□ -1.92
TRAF4Q9BUZ4 FAM60DP-201ENST00000524174 632 ntBASIC3.08□□□□□ -1.92
TRAF4Q9BUZ4 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
TRAF4Q9BUZ4 AP003392.2-201ENST00000527269 208 ntBASIC3.08□□□□□ -1.92
TRAF4Q9BUZ4 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
TRAF4Q9BUZ4 AC128657.1-201ENST00000549459 145 ntBASIC3.08□□□□□ -1.92
TRAF4Q9BUZ4 AL391156.1-201ENST00000554965 554 ntBASIC3.08□□□□□ -1.92
TRAF4Q9BUZ4 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC3.08□□□□□ -1.92
TRAF4Q9BUZ4 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC3.08□□□□□ -1.92
TRAF4Q9BUZ4 MIR5195-201ENST00000583555 115 ntBASIC3.08□□□□□ -1.92
TRAF4Q9BUZ4 AF038458.1-201ENST00000588406 262 ntBASIC3.08□□□□□ -1.92
TRAF4Q9BUZ4 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC3.08□□□□□ -1.92
TRAF4Q9BUZ4 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC3.08□□□□□ -1.92
TRAF4Q9BUZ4 AL133173.2-201ENST00000614270 90 ntBASIC3.08□□□□□ -1.92
TRAF4Q9BUZ4 AL355365.1-201ENST00000616480 294 ntBASIC3.08□□□□□ -1.92
TRAF4Q9BUZ4 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
TRAF4Q9BUZ4 AC068880.5-201ENST00000624331 290 ntBASIC3.08□□□□□ -1.92
TRAF4Q9BUZ4 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC3.08□□□□□ -1.92
TRAF4Q9BUZ4 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC3.08□□□□□ -1.92
TRAF4Q9BUZ4 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
TRAF4Q9BUZ4 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
TRAF4Q9BUZ4 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC3.08□□□□□ -1.92
TRAF4Q9BUZ4 FAM35CP-201ENST00000554755 2470 ntBASIC3.08□□□□□ -1.92
TRAF4Q9BUZ4 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
TRAF4Q9BUZ4 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.07□□□□□ -1.92
TRAF4Q9BUZ4 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC3.07□□□□□ -1.92
TRAF4Q9BUZ4 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC3.07□□□□□ -1.92
TRAF4Q9BUZ4 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
TRAF4Q9BUZ4 HDX-206ENST00000506585 6158 ntTSL 2 BASIC3.07□□□□□ -1.92
TRAF4Q9BUZ4 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
TRAF4Q9BUZ4 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC3.07□□□□□ -1.92
TRAF4Q9BUZ4 HSPE1P11-201ENST00000339579 310 ntBASIC3.07□□□□□ -1.92
TRAF4Q9BUZ4 Y_RNA.22-201ENST00000362492 102 ntBASIC3.07□□□□□ -1.92
TRAF4Q9BUZ4 RN7SKP226-201ENST00000364912 300 ntBASIC3.07□□□□□ -1.92
TRAF4Q9BUZ4 RNU6-282P-201ENST00000365357 103 ntBASIC3.07□□□□□ -1.92
TRAF4Q9BUZ4 RNU6-39P-201ENST00000384344 107 ntBASIC3.07□□□□□ -1.92
TRAF4Q9BUZ4 AL031121.1-201ENST00000406553 254 ntBASIC3.07□□□□□ -1.92
TRAF4Q9BUZ4 U3.39-201ENST00000408569 239 ntBASIC3.07□□□□□ -1.92
TRAF4Q9BUZ4 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC3.07□□□□□ -1.92
TRAF4Q9BUZ4 ZNF90P2-204ENST00000419323 1075 ntBASIC3.07□□□□□ -1.92
TRAF4Q9BUZ4 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC3.07□□□□□ -1.92
TRAF4Q9BUZ4 AL158156.1-201ENST00000422509 473 ntBASIC3.07□□□□□ -1.92
TRAF4Q9BUZ4 RPL23AP82-202ENST00000427528 469 ntBASIC3.07□□□□□ -1.92
TRAF4Q9BUZ4 AC008850.1-201ENST00000427546 362 ntBASIC3.07□□□□□ -1.92
TRAF4Q9BUZ4 AC104651.1-201ENST00000427559 735 ntBASIC3.07□□□□□ -1.92
TRAF4Q9BUZ4 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC3.07□□□□□ -1.92
TRAF4Q9BUZ4 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC3.07□□□□□ -1.92
TRAF4Q9BUZ4 AC119618.1-201ENST00000434191 222 ntBASIC3.07□□□□□ -1.92
TRAF4Q9BUZ4 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC3.07□□□□□ -1.92
TRAF4Q9BUZ4 HMGB3P12-201ENST00000438745 556 ntBASIC3.07□□□□□ -1.92
TRAF4Q9BUZ4 AL357552.1-201ENST00000445254 415 ntBASIC3.07□□□□□ -1.92
TRAF4Q9BUZ4 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC3.07□□□□□ -1.92
TRAF4Q9BUZ4 CENPBD1P1-201ENST00000464061 469 ntBASIC3.07□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 100.1 ms