Protein–RNA interactions for Protein: Q99835

SMO, Smoothened homolog, humanhuman

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMOQ99835 AC022690.1-201ENST00000526681 550 ntBASIC3.93□□□□□ -1.78
SMOQ99835 AC087241.2-201ENST00000535801 324 ntBASIC3.93□□□□□ -1.78
SMOQ99835 SCOCP1-201ENST00000554676 349 ntBASIC3.93□□□□□ -1.78
SMOQ99835 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC3.93□□□□□ -1.78
SMOQ99835 MIR4795-201ENST00000584182 89 ntBASIC3.93□□□□□ -1.78
SMOQ99835 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC3.93□□□□□ -1.78
SMOQ99835 AL132765.2-201ENST00000610812 351 ntBASIC3.93□□□□□ -1.78
SMOQ99835 AC015967.1-201ENST00000619893 476 ntBASIC3.93□□□□□ -1.78
SMOQ99835 AC099654.10-201ENST00000640395 161 ntBASIC3.93□□□□□ -1.78
SMOQ99835 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC3.93□□□□□ -1.78
SMOQ99835 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
SMOQ99835 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC3.93□□□□□ -1.78
SMOQ99835 AC006026.1-201ENST00000444025 1803 ntBASIC3.93□□□□□ -1.78
SMOQ99835 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC3.93□□□□□ -1.78
SMOQ99835 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
SMOQ99835 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
SMOQ99835 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC3.92□□□□□ -1.78
SMOQ99835 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
SMOQ99835 RNA5SP51-201ENST00000364750 119 ntBASIC3.92□□□□□ -1.78
SMOQ99835 SNORA62.3-201ENST00000365110 153 ntBASIC3.92□□□□□ -1.78
SMOQ99835 RNU6-76P-201ENST00000384060 104 ntBASIC3.92□□□□□ -1.78
SMOQ99835 PTMAP2-201ENST00000397627 327 ntBASIC3.92□□□□□ -1.78
SMOQ99835 AL122016.1-201ENST00000403365 367 ntBASIC3.92□□□□□ -1.78
SMOQ99835 RN7SKP32-201ENST00000410167 303 ntBASIC3.92□□□□□ -1.78
SMOQ99835 OR6C66P-201ENST00000414917 930 ntBASIC3.92□□□□□ -1.78
SMOQ99835 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC3.92□□□□□ -1.78
SMOQ99835 AC009161.1-201ENST00000417306 376 ntBASIC3.92□□□□□ -1.78
SMOQ99835 SYF2P2-201ENST00000417620 583 ntBASIC3.92□□□□□ -1.78
SMOQ99835 AC004552.1-201ENST00000419089 348 ntBASIC3.92□□□□□ -1.78
SMOQ99835 AL035423.1-201ENST00000420331 213 ntBASIC3.92□□□□□ -1.78
SMOQ99835 CYP4F29P-201ENST00000420685 446 ntBASIC3.92□□□□□ -1.78
SMOQ99835 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC3.92□□□□□ -1.78
SMOQ99835 IFNA20P-201ENST00000436840 528 ntBASIC3.92□□□□□ -1.78
SMOQ99835 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC3.92□□□□□ -1.78
SMOQ99835 SNORD108-201ENST00000459332 71 ntBASIC3.92□□□□□ -1.78
SMOQ99835 RPS26P3-201ENST00000470205 348 ntBASIC3.92□□□□□ -1.78
SMOQ99835 RPL23AP11-201ENST00000475260 469 ntBASIC3.92□□□□□ -1.78
SMOQ99835 AC090543.2-201ENST00000483963 348 ntBASIC3.92□□□□□ -1.78
SMOQ99835 AC004057.1-201ENST00000485827 348 ntBASIC3.92□□□□□ -1.78
SMOQ99835 UBE2Q2P9-201ENST00000490086 202 ntBASIC3.92□□□□□ -1.78
SMOQ99835 AC103851.1-201ENST00000506833 274 ntBASIC3.92□□□□□ -1.78
SMOQ99835 CCDC34P1-201ENST00000507441 517 ntBASIC3.92□□□□□ -1.78
SMOQ99835 AC117522.3-201ENST00000507974 584 ntBASIC3.92□□□□□ -1.78
SMOQ99835 FGF7P4-201ENST00000509595 295 ntBASIC3.92□□□□□ -1.78
SMOQ99835 AC098591.2-201ENST00000510152 315 ntBASIC3.92□□□□□ -1.78
SMOQ99835 Y_RNA.675-201ENST00000516389 149 ntBASIC3.92□□□□□ -1.78
SMOQ99835 AP006587.4-201ENST00000526053 529 ntBASIC3.92□□□□□ -1.78
SMOQ99835 AC008011.1-201ENST00000545989 227 ntBASIC3.92□□□□□ -1.78
SMOQ99835 AC093012.1-202ENST00000549403 582 ntBASIC3.92□□□□□ -1.78
SMOQ99835 PSMA3P-201ENST00000555485 635 ntBASIC3.92□□□□□ -1.78
SMOQ99835 OR4H12P-201ENST00000556269 907 ntBASIC3.92□□□□□ -1.78
SMOQ99835 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC3.92□□□□□ -1.78
SMOQ99835 AC037471.2-201ENST00000564941 598 ntBASIC3.92□□□□□ -1.78
SMOQ99835 AC008521.1-201ENST00000587471 187 ntBASIC3.92□□□□□ -1.78
SMOQ99835 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC3.92□□□□□ -1.78
SMOQ99835 AC007619.2-201ENST00000605743 379 ntBASIC3.92□□□□□ -1.78
SMOQ99835 AL390240.1-201ENST00000612950 384 ntBASIC3.92□□□□□ -1.78
SMOQ99835 AC010133.1-201ENST00000615809 842 ntBASIC3.92□□□□□ -1.78
SMOQ99835 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC3.92□□□□□ -1.78
SMOQ99835 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC3.92□□□□□ -1.78
SMOQ99835 AC112200.1-201ENST00000625015 234 ntBASIC3.92□□□□□ -1.78
SMOQ99835 TEX41-300ENST00000631048 69 ntTSL 5 BASIC3.92□□□□□ -1.78
SMOQ99835 AC119674.1-207ENST00000641355 633 ntBASIC3.92□□□□□ -1.78
SMOQ99835 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC3.92□□□□□ -1.78
SMOQ99835 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC3.92□□□□□ -1.78
SMOQ99835 AL157700.1-201ENST00000561973 1432 ntBASIC3.92□□□□□ -1.78
SMOQ99835 MFSD8-236ENST00000641509 4050 ntBASIC3.92□□□□□ -1.78
SMOQ99835 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC3.92□□□□□ -1.78
SMOQ99835 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
SMOQ99835 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC3.91□□□□□ -1.78
SMOQ99835 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC3.91□□□□□ -1.78
SMOQ99835 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
SMOQ99835 RNU6-1287P-201ENST00000362914 107 ntBASIC3.91□□□□□ -1.78
SMOQ99835 RNA5SP235-201ENST00000365411 114 ntBASIC3.91□□□□□ -1.78
SMOQ99835 PARD3-204ENST00000374768 799 ntTSL 3 BASIC3.91□□□□□ -1.78
SMOQ99835 AL359837.1-201ENST00000381357 287 ntBASIC3.91□□□□□ -1.78
SMOQ99835 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC3.91□□□□□ -1.78
SMOQ99835 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
SMOQ99835 SNORA5A-201ENST00000384111 134 ntBASIC3.91□□□□□ -1.78
SMOQ99835 RNU6-1060P-201ENST00000384664 107 ntBASIC3.91□□□□□ -1.78
SMOQ99835 RNU6-550P-201ENST00000391057 101 ntBASIC3.91□□□□□ -1.78
SMOQ99835 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC3.91□□□□□ -1.78
SMOQ99835 RNA5SP39-201ENST00000411245 120 ntBASIC3.91□□□□□ -1.78
SMOQ99835 MTND3P8-201ENST00000412909 339 ntBASIC3.91□□□□□ -1.78
SMOQ99835 RPL30P2-201ENST00000414021 291 ntBASIC3.91□□□□□ -1.78
SMOQ99835 NDUFB4P5-201ENST00000415445 361 ntBASIC3.91□□□□□ -1.78
SMOQ99835 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
SMOQ99835 RPL7P46-201ENST00000425129 740 ntBASIC3.91□□□□□ -1.78
SMOQ99835 AL365400.1-201ENST00000431854 640 ntBASIC3.91□□□□□ -1.78
SMOQ99835 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC3.91□□□□□ -1.78
SMOQ99835 ATP8A2P2-201ENST00000437678 1568 ntBASIC3.91□□□□□ -1.78
SMOQ99835 AL356535.1-201ENST00000440335 398 ntBASIC3.91□□□□□ -1.78
SMOQ99835 AL121871.1-201ENST00000443413 436 ntBASIC3.91□□□□□ -1.78
SMOQ99835 AC007547.1-201ENST00000462177 490 ntBASIC3.91□□□□□ -1.78
SMOQ99835 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC3.91□□□□□ -1.78
SMOQ99835 MTCO3P9-201ENST00000506989 781 ntBASIC3.91□□□□□ -1.78
SMOQ99835 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC3.91□□□□□ -1.78
SMOQ99835 RNU4-49P-201ENST00000516080 140 ntBASIC3.91□□□□□ -1.78
SMOQ99835 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC3.91□□□□□ -1.78
SMOQ99835 AC105029.1-201ENST00000520250 669 ntBASIC3.91□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 119 ms