Protein–RNA interactions for Protein: Q96NR3

PTCHD1, Patched domain-containing protein 1, humanhuman

Predictions only

Length 888 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD1Q96NR3 Y_RNA.721-201ENST00000517207 102 ntBASIC4.36□□□□□ -1.71
PTCHD1Q96NR3 AC087369.1-201ENST00000520775 996 ntBASIC4.36□□□□□ -1.71
PTCHD1Q96NR3 AC091564.3-201ENST00000527398 429 ntTSL 3 BASIC4.36□□□□□ -1.71
PTCHD1Q96NR3 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC4.36□□□□□ -1.71
PTCHD1Q96NR3 AC084783.1-201ENST00000565846 910 ntBASIC4.36□□□□□ -1.71
PTCHD1Q96NR3 MIR4330-201ENST00000579077 105 ntBASIC4.36□□□□□ -1.71
PTCHD1Q96NR3 SNORD84-203ENST00000584275 78 ntBASIC4.36□□□□□ -1.71
PTCHD1Q96NR3 MIR548AC-201ENST00000585049 88 ntBASIC4.36□□□□□ -1.71
PTCHD1Q96NR3 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC4.36□□□□□ -1.71
PTCHD1Q96NR3 AC005344.1-201ENST00000613391 459 ntBASIC4.36□□□□□ -1.71
PTCHD1Q96NR3 AC034102.8-201ENST00000615146 484 ntBASIC4.36□□□□□ -1.71
PTCHD1Q96NR3 AC015967.1-201ENST00000619893 476 ntBASIC4.36□□□□□ -1.71
PTCHD1Q96NR3 AC007792.1-201ENST00000623023 402 ntBASIC4.36□□□□□ -1.71
PTCHD1Q96NR3 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC4.36□□□□□ -1.71
PTCHD1Q96NR3 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
PTCHD1Q96NR3 ZMYND11-209ENST00000402736 3950 ntTSL 5 BASIC4.36□□□□□ -1.71
PTCHD1Q96NR3 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC4.36□□□□□ -1.71
PTCHD1Q96NR3 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC4.36□□□□□ -1.71
PTCHD1Q96NR3 CARF-203ENST00000414439 2099 ntTSL 2 BASIC4.36□□□□□ -1.71
PTCHD1Q96NR3 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
PTCHD1Q96NR3 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC4.36□□□□□ -1.71
PTCHD1Q96NR3 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC4.36□□□□□ -1.71
PTCHD1Q96NR3 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC4.35□□□□□ -1.71
PTCHD1Q96NR3 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
PTCHD1Q96NR3 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC4.35□□□□□ -1.71
PTCHD1Q96NR3 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
PTCHD1Q96NR3 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
PTCHD1Q96NR3 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
PTCHD1Q96NR3 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC4.35□□□□□ -1.71
PTCHD1Q96NR3 RNU6-238P-201ENST00000363313 106 ntBASIC4.35□□□□□ -1.71
PTCHD1Q96NR3 RNU1-83P-201ENST00000363426 164 ntBASIC4.35□□□□□ -1.71
PTCHD1Q96NR3 SNORD113.2-201ENST00000364166 89 ntBASIC4.35□□□□□ -1.71
PTCHD1Q96NR3 SNORA70F-201ENST00000384142 135 ntBASIC4.35□□□□□ -1.71
PTCHD1Q96NR3 RNA5SP397-201ENST00000391323 118 ntBASIC4.35□□□□□ -1.71
PTCHD1Q96NR3 AC063979.1-201ENST00000415539 377 ntBASIC4.35□□□□□ -1.71
PTCHD1Q96NR3 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC4.35□□□□□ -1.71
PTCHD1Q96NR3 AC099799.1-201ENST00000439809 192 ntBASIC4.35□□□□□ -1.71
PTCHD1Q96NR3 AC011753.3-201ENST00000443436 406 ntBASIC4.35□□□□□ -1.71
PTCHD1Q96NR3 AC004692.2-202ENST00000458680 478 ntTSL 3 BASIC4.35□□□□□ -1.71
PTCHD1Q96NR3 RPS15AP34-201ENST00000487776 387 ntBASIC4.35□□□□□ -1.71
PTCHD1Q96NR3 AC018437.1-201ENST00000492214 406 ntBASIC4.35□□□□□ -1.71
PTCHD1Q96NR3 MTND4LP22-201ENST00000508209 276 ntBASIC4.35□□□□□ -1.71
PTCHD1Q96NR3 AC007016.1-201ENST00000512110 244 ntBASIC4.35□□□□□ -1.71
PTCHD1Q96NR3 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC4.35□□□□□ -1.71
PTCHD1Q96NR3 RNA5SP464-201ENST00000516251 108 ntBASIC4.35□□□□□ -1.71
PTCHD1Q96NR3 RN7SKP92-201ENST00000517266 244 ntBASIC4.35□□□□□ -1.71
PTCHD1Q96NR3 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC4.35□□□□□ -1.71
PTCHD1Q96NR3 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC4.35□□□□□ -1.71
PTCHD1Q96NR3 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC4.35□□□□□ -1.71
PTCHD1Q96NR3 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC4.35□□□□□ -1.71
PTCHD1Q96NR3 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC4.35□□□□□ -1.71
PTCHD1Q96NR3 AC109446.1-201ENST00000566172 220 ntBASIC4.35□□□□□ -1.71
PTCHD1Q96NR3 LRRC37A5P-203ENST00000580181 585 ntBASIC4.35□□□□□ -1.71
PTCHD1Q96NR3 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC4.35□□□□□ -1.71
PTCHD1Q96NR3 AC018889.1-201ENST00000605372 397 ntBASIC4.35□□□□□ -1.71
PTCHD1Q96NR3 SNORD91B-202ENST00000608459 222 ntBASIC4.35□□□□□ -1.71
PTCHD1Q96NR3 MIR7703-201ENST00000620784 77 ntBASIC4.35□□□□□ -1.71
PTCHD1Q96NR3 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
PTCHD1Q96NR3 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC4.35□□□□□ -1.71
PTCHD1Q96NR3 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
PTCHD1Q96NR3 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC4.35□□□□□ -1.71
PTCHD1Q96NR3 LDHAL6CP-202ENST00000550738 3224 ntBASIC4.35□□□□□ -1.71
PTCHD1Q96NR3 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC4.35□□□□□ -1.71
PTCHD1Q96NR3 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC4.35□□□□□ -1.71
PTCHD1Q96NR3 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
PTCHD1Q96NR3 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
PTCHD1Q96NR3 AL391684.1-202ENST00000641293 1636 ntBASIC4.35□□□□□ -1.71
PTCHD1Q96NR3 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
PTCHD1Q96NR3 AC091812.1-201ENST00000432235 1948 ntBASIC4.34□□□□□ -1.71
PTCHD1Q96NR3 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC4.34□□□□□ -1.71
PTCHD1Q96NR3 EOGT-210ENST00000615922 1931 ntBASIC4.34□□□□□ -1.71
PTCHD1Q96NR3 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC4.34□□□□□ -1.71
PTCHD1Q96NR3 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC4.34□□□□□ -1.71
PTCHD1Q96NR3 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC4.34□□□□□ -1.71
PTCHD1Q96NR3 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
PTCHD1Q96NR3 SNORD73A-201ENST00000386062 65 ntBASIC4.34□□□□□ -1.71
PTCHD1Q96NR3 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC4.34□□□□□ -1.71
PTCHD1Q96NR3 RNU6-101P-201ENST00000410323 104 ntBASIC4.34□□□□□ -1.71
PTCHD1Q96NR3 RNU2-23P-201ENST00000410545 195 ntBASIC4.34□□□□□ -1.71
PTCHD1Q96NR3 RNU6-607P-201ENST00000411283 108 ntBASIC4.34□□□□□ -1.71
PTCHD1Q96NR3 SYF2P2-201ENST00000417620 583 ntBASIC4.34□□□□□ -1.71
PTCHD1Q96NR3 AC073521.1-201ENST00000418679 625 ntTSL 3 BASIC4.34□□□□□ -1.71
PTCHD1Q96NR3 EIF4EP1-201ENST00000422311 642 ntBASIC4.34□□□□□ -1.71
PTCHD1Q96NR3 AC245028.1-201ENST00000423259 256 ntBASIC4.34□□□□□ -1.71
PTCHD1Q96NR3 AL451062.2-201ENST00000427515 271 ntBASIC4.34□□□□□ -1.71
PTCHD1Q96NR3 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC4.34□□□□□ -1.71
PTCHD1Q96NR3 AC011816.1-201ENST00000441346 546 ntBASIC4.34□□□□□ -1.71
PTCHD1Q96NR3 AL162591.2-201ENST00000449634 317 ntBASIC4.34□□□□□ -1.71
PTCHD1Q96NR3 PCMTD1P1-201ENST00000455560 355 ntBASIC4.34□□□□□ -1.71
PTCHD1Q96NR3 U8.20-201ENST00000459445 131 ntBASIC4.34□□□□□ -1.71
PTCHD1Q96NR3 AC108751.2-201ENST00000469993 231 ntBASIC4.34□□□□□ -1.71
PTCHD1Q96NR3 RPL23AP2-201ENST00000471227 466 ntBASIC4.34□□□□□ -1.71
PTCHD1Q96NR3 CREM-230ENST00000474931 626 ntTSL 2 BASIC4.34□□□□□ -1.71
PTCHD1Q96NR3 HSPE1P6-201ENST00000479457 291 ntBASIC4.34□□□□□ -1.71
PTCHD1Q96NR3 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC4.34□□□□□ -1.71
PTCHD1Q96NR3 APOOP4-201ENST00000513530 597 ntBASIC4.34□□□□□ -1.71
PTCHD1Q96NR3 AC008574.1-201ENST00000514240 433 ntTSL 3 BASIC4.34□□□□□ -1.71
PTCHD1Q96NR3 RNU6-475P-201ENST00000516073 104 ntBASIC4.34□□□□□ -1.71
PTCHD1Q96NR3 RNU6-927P-201ENST00000516199 100 ntBASIC4.34□□□□□ -1.71
PTCHD1Q96NR3 RNU4-77P-201ENST00000516692 156 ntBASIC4.34□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 98.1 ms