Protein–RNA interactions for Protein: Q96L12

CALR3, Calreticulin-3, humanhuman

Known RBP Predictions only

Length 384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALR3Q96L12 U3.42-201ENST00000408746 214 ntBASIC5.36□□□□□ -1.55
CALR3Q96L12 RN7SKP125-201ENST00000410481 302 ntBASIC5.36□□□□□ -1.55
CALR3Q96L12 AC092047.1-201ENST00000424997 240 ntBASIC5.36□□□□□ -1.55
CALR3Q96L12 RPS29P9-201ENST00000440360 171 ntBASIC5.36□□□□□ -1.55
CALR3Q96L12 AP000770.1-201ENST00000444123 583 ntTSL 5 BASIC5.36□□□□□ -1.55
CALR3Q96L12 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC5.36□□□□□ -1.55
CALR3Q96L12 OARD1-207ENST00000468811 819 ntAPPRIS P1 TSL 2 BASIC5.36□□□□□ -1.55
CALR3Q96L12 CREM-226ENST00000469949 721 ntTSL 3 BASIC5.36□□□□□ -1.55
CALR3Q96L12 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC5.36□□□□□ -1.55
CALR3Q96L12 AC083829.1-201ENST00000503756 657 ntBASIC5.36□□□□□ -1.55
CALR3Q96L12 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC5.36□□□□□ -1.55
CALR3Q96L12 Y_RNA.715-201ENST00000517082 110 ntBASIC5.36□□□□□ -1.55
CALR3Q96L12 RNU6-794P-201ENST00000517261 64 ntBASIC5.36□□□□□ -1.55
CALR3Q96L12 AC040926.1-201ENST00000530195 238 ntBASIC5.36□□□□□ -1.55
CALR3Q96L12 MYL12BP1-201ENST00000569826 507 ntBASIC5.36□□□□□ -1.55
CALR3Q96L12 RN7SL176P-201ENST00000580352 264 ntBASIC5.36□□□□□ -1.55
CALR3Q96L12 AC007922.3-201ENST00000581648 543 ntTSL 3 BASIC5.36□□□□□ -1.55
CALR3Q96L12 SRGNP1-201ENST00000603392 451 ntBASIC5.36□□□□□ -1.55
CALR3Q96L12 AC027309.3-201ENST00000623419 351 ntBASIC5.36□□□□□ -1.55
CALR3Q96L12 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC5.36□□□□□ -1.55
CALR3Q96L12 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
CALR3Q96L12 AP000542.2-201ENST00000623199 6179 ntBASIC5.36□□□□□ -1.55
CALR3Q96L12 USP8P1-201ENST00000494673 3183 ntBASIC5.36□□□□□ -1.55
CALR3Q96L12 MAPK10-208ENST00000395169 4049 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
CALR3Q96L12 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC5.36□□□□□ -1.55
CALR3Q96L12 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
CALR3Q96L12 LRRC53-201ENST00000294635 3859 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
CALR3Q96L12 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
CALR3Q96L12 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC5.35□□□□□ -1.55
CALR3Q96L12 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
CALR3Q96L12 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
CALR3Q96L12 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
CALR3Q96L12 RN7SKP115-201ENST00000363177 317 ntBASIC5.35□□□□□ -1.55
CALR3Q96L12 RNA5SP510-201ENST00000364697 99 ntBASIC5.35□□□□□ -1.55
CALR3Q96L12 RNU5E-7P-201ENST00000365290 117 ntBASIC5.35□□□□□ -1.55
CALR3Q96L12 MIR493-201ENST00000385254 89 ntBASIC5.35□□□□□ -1.55
CALR3Q96L12 AC009804.1-201ENST00000400949 179 ntBASIC5.35□□□□□ -1.55
CALR3Q96L12 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC5.35□□□□□ -1.55
CALR3Q96L12 AL450023.3-201ENST00000440592 271 ntBASIC5.35□□□□□ -1.55
CALR3Q96L12 AL137076.1-201ENST00000441046 551 ntTSL 2 BASIC5.35□□□□□ -1.55
CALR3Q96L12 RPL36AP39-201ENST00000445859 318 ntBASIC5.35□□□□□ -1.55
CALR3Q96L12 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC5.35□□□□□ -1.55
CALR3Q96L12 RNU6-377P-201ENST00000515965 102 ntBASIC5.35□□□□□ -1.55
CALR3Q96L12 RNU6-612P-201ENST00000516909 102 ntBASIC5.35□□□□□ -1.55
CALR3Q96L12 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC5.35□□□□□ -1.55
CALR3Q96L12 AC006600.1-201ENST00000572529 153 ntBASIC5.35□□□□□ -1.55
CALR3Q96L12 MIR5701-3-201ENST00000578890 82 ntBASIC5.35□□□□□ -1.55
CALR3Q96L12 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC5.35□□□□□ -1.55
CALR3Q96L12 MIR5701-1-201ENST00000585138 82 ntBASIC5.35□□□□□ -1.55
CALR3Q96L12 VN1R91P-201ENST00000594377 169 ntBASIC5.35□□□□□ -1.55
CALR3Q96L12 MIR1244-1-201ENST00000612829 85 ntBASIC5.35□□□□□ -1.55
CALR3Q96L12 MIR5701-2-201ENST00000615634 82 ntBASIC5.35□□□□□ -1.55
CALR3Q96L12 C1orf195-202ENST00000625027 441 ntTSL 5 BASIC5.35□□□□□ -1.55
CALR3Q96L12 MIR1244-3-201ENST00000635744 85 ntBASIC5.35□□□□□ -1.55
CALR3Q96L12 MIR1244-2-201ENST00000636449 85 ntBASIC5.35□□□□□ -1.55
CALR3Q96L12 MIR1244-4-202ENST00000636813 85 ntBASIC5.35□□□□□ -1.55
CALR3Q96L12 CCDC178-202ENST00000383096 3391 ntAPPRIS ALT2 TSL 5 BASIC5.35□□□□□ -1.55
CALR3Q96L12 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC5.35□□□□□ -1.55
CALR3Q96L12 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC5.35□□□□□ -1.55
CALR3Q96L12 HSP90AA4P-202ENST00000506915 2228 ntBASIC5.35□□□□□ -1.55
CALR3Q96L12 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC5.35□□□□□ -1.55
CALR3Q96L12 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC5.34□□□□□ -1.55
CALR3Q96L12 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
CALR3Q96L12 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC5.34□□□□□ -1.55
CALR3Q96L12 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC5.34□□□□□ -1.55
CALR3Q96L12 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC5.34□□□□□ -1.55
CALR3Q96L12 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
CALR3Q96L12 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.55
CALR3Q96L12 AHNAK-202ENST00000378024 18787 ntAPPRIS P3 TSL 2 BASIC5.34□□□□□ -1.55
CALR3Q96L12 RNA5SP183-201ENST00000362452 119 ntBASIC5.34□□□□□ -1.55
CALR3Q96L12 RNU6-595P-201ENST00000363944 107 ntBASIC5.34□□□□□ -1.55
CALR3Q96L12 RNY3P11-201ENST00000364153 102 ntBASIC5.34□□□□□ -1.55
CALR3Q96L12 Y_RNA.210-201ENST00000364161 110 ntBASIC5.34□□□□□ -1.55
CALR3Q96L12 RNU6-1318P-201ENST00000365389 103 ntBASIC5.34□□□□□ -1.55
CALR3Q96L12 RNA5SP167-201ENST00000365461 116 ntBASIC5.34□□□□□ -1.55
CALR3Q96L12 RNU6-140P-201ENST00000384566 108 ntBASIC5.34□□□□□ -1.55
CALR3Q96L12 Y_RNA.526-201ENST00000384572 110 ntBASIC5.34□□□□□ -1.55
CALR3Q96L12 MIR600-201ENST00000385007 98 ntBASIC5.34□□□□□ -1.55
CALR3Q96L12 MIR143-201ENST00000385300 106 ntBASIC5.34□□□□□ -1.55
CALR3Q96L12 RNU6-700P-201ENST00000391043 107 ntBASIC5.34□□□□□ -1.55
CALR3Q96L12 AC007098.1-201ENST00000420122 367 ntBASIC5.34□□□□□ -1.55
CALR3Q96L12 RPL17P36-201ENST00000420302 549 ntBASIC5.34□□□□□ -1.55
CALR3Q96L12 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
CALR3Q96L12 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
CALR3Q96L12 AC009478.1-201ENST00000429816 562 ntTSL 3 BASIC5.34□□□□□ -1.55
CALR3Q96L12 AL358472.1-201ENST00000431295 329 ntBASIC5.34□□□□□ -1.55
CALR3Q96L12 LINC00969-211ENST00000438608 525 ntTSL 5 BASIC5.34□□□□□ -1.55
CALR3Q96L12 AC096644.1-201ENST00000446169 390 ntTSL 3 BASIC5.34□□□□□ -1.55
CALR3Q96L12 AL354714.3-201ENST00000447284 493 ntBASIC5.34□□□□□ -1.55
CALR3Q96L12 RPL30P5-201ENST00000494923 336 ntBASIC5.34□□□□□ -1.55
CALR3Q96L12 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
CALR3Q96L12 AC011389.1-203ENST00000513790 573 ntTSL 4 BASIC5.34□□□□□ -1.55
CALR3Q96L12 RNU6-1271P-201ENST00000517049 105 ntBASIC5.34□□□□□ -1.55
CALR3Q96L12 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC5.34□□□□□ -1.55
CALR3Q96L12 AC005363.1-201ENST00000530779 351 ntBASIC5.34□□□□□ -1.55
CALR3Q96L12 AC027544.3-201ENST00000535082 757 ntBASIC5.34□□□□□ -1.55
CALR3Q96L12 AC005476.1-201ENST00000554427 397 ntBASIC5.34□□□□□ -1.55
CALR3Q96L12 TRAV30-201ENST00000557168 337 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
CALR3Q96L12 RNF138P2-201ENST00000603490 592 ntBASIC5.34□□□□□ -1.55
CALR3Q96L12 U6.99-201ENST00000637524 83 ntBASIC5.34□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 113.2 ms