Protein–RNA interactions for Protein: Q96JY6

PDLIM2, PDZ and LIM domain protein 2, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2Q96JY6 AP000942.4-201ENST00000604811 241 ntBASIC3.97□□□□□ -1.77
PDLIM2Q96JY6 AL590392.1-201ENST00000604960 446 ntBASIC3.97□□□□□ -1.77
PDLIM2Q96JY6 AC021646.1-201ENST00000605469 484 ntBASIC3.97□□□□□ -1.77
PDLIM2Q96JY6 AC103710.2-201ENST00000609912 942 ntBASIC3.97□□□□□ -1.77
PDLIM2Q96JY6 AC023043.4-201ENST00000612081 449 ntBASIC3.97□□□□□ -1.77
PDLIM2Q96JY6 AL590099.1-201ENST00000615276 138 ntBASIC3.97□□□□□ -1.77
PDLIM2Q96JY6 AC244100.1-202ENST00000621554 382 ntBASIC3.97□□□□□ -1.77
PDLIM2Q96JY6 AC073476.4-201ENST00000628409 72 ntBASIC3.97□□□□□ -1.77
PDLIM2Q96JY6 AP000553.6-201ENST00000641242 118 ntBASIC3.97□□□□□ -1.77
PDLIM2Q96JY6 MTND4P27-201ENST00000450813 1354 ntBASIC3.97□□□□□ -1.77
PDLIM2Q96JY6 MTND5P3-201ENST00000438536 1800 ntBASIC3.97□□□□□ -1.77
PDLIM2Q96JY6 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC3.97□□□□□ -1.77
PDLIM2Q96JY6 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC3.97□□□□□ -1.77
PDLIM2Q96JY6 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC3.97□□□□□ -1.77
PDLIM2Q96JY6 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.78
PDLIM2Q96JY6 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
PDLIM2Q96JY6 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
PDLIM2Q96JY6 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
PDLIM2Q96JY6 AC011155.1-201ENST00000316512 456 ntBASIC3.96□□□□□ -1.78
PDLIM2Q96JY6 Y_RNA.132-201ENST00000363421 102 ntBASIC3.96□□□□□ -1.78
PDLIM2Q96JY6 U3.11-201ENST00000364476 212 ntBASIC3.96□□□□□ -1.78
PDLIM2Q96JY6 Y_RNA.373-201ENST00000365600 103 ntBASIC3.96□□□□□ -1.78
PDLIM2Q96JY6 RNU4-20P-201ENST00000365601 151 ntBASIC3.96□□□□□ -1.78
PDLIM2Q96JY6 Y_RNA.387-201ENST00000383918 102 ntBASIC3.96□□□□□ -1.78
PDLIM2Q96JY6 RNU6-831P-201ENST00000384548 107 ntBASIC3.96□□□□□ -1.78
PDLIM2Q96JY6 MIR558-201ENST00000384920 94 ntBASIC3.96□□□□□ -1.78
PDLIM2Q96JY6 MIR454-201ENST00000390180 115 ntBASIC3.96□□□□□ -1.78
PDLIM2Q96JY6 PTMAP5-201ENST00000393073 333 ntBASIC3.96□□□□□ -1.78
PDLIM2Q96JY6 RNU6-193P-201ENST00000410977 107 ntBASIC3.96□□□□□ -1.78
PDLIM2Q96JY6 HMGN1P24-201ENST00000412282 298 ntBASIC3.96□□□□□ -1.78
PDLIM2Q96JY6 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC3.96□□□□□ -1.78
PDLIM2Q96JY6 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC3.96□□□□□ -1.78
PDLIM2Q96JY6 AL451054.2-201ENST00000420896 202 ntBASIC3.96□□□□□ -1.78
PDLIM2Q96JY6 AC099336.2-201ENST00000422457 254 ntBASIC3.96□□□□□ -1.78
PDLIM2Q96JY6 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC3.96□□□□□ -1.78
PDLIM2Q96JY6 RSL24D1P6-201ENST00000426934 401 ntBASIC3.96□□□□□ -1.78
PDLIM2Q96JY6 AC016912.1-201ENST00000432241 545 ntTSL 3 BASIC3.96□□□□□ -1.78
PDLIM2Q96JY6 RPL21P89-201ENST00000444021 467 ntBASIC3.96□□□□□ -1.78
PDLIM2Q96JY6 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC3.96□□□□□ -1.78
PDLIM2Q96JY6 AL590639.1-201ENST00000456484 337 ntBASIC3.96□□□□□ -1.78
PDLIM2Q96JY6 RPS29P15-201ENST00000458329 171 ntBASIC3.96□□□□□ -1.78
PDLIM2Q96JY6 PPIAP21-201ENST00000464473 501 ntBASIC3.96□□□□□ -1.78
PDLIM2Q96JY6 RN7SL594P-201ENST00000470590 287 ntBASIC3.96□□□□□ -1.78
PDLIM2Q96JY6 AL139099.1-201ENST00000497398 403 ntBASIC3.96□□□□□ -1.78
PDLIM2Q96JY6 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC3.96□□□□□ -1.78
PDLIM2Q96JY6 AC110792.2-201ENST00000510278 224 ntBASIC3.96□□□□□ -1.78
PDLIM2Q96JY6 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC3.96□□□□□ -1.78
PDLIM2Q96JY6 RN7SKP13-201ENST00000515933 244 ntBASIC3.96□□□□□ -1.78
PDLIM2Q96JY6 RNU1-143P-201ENST00000516296 146 ntBASIC3.96□□□□□ -1.78
PDLIM2Q96JY6 SCARNA14-201ENST00000516903 136 ntBASIC3.96□□□□□ -1.78
PDLIM2Q96JY6 AC022695.1-201ENST00000522089 237 ntBASIC3.96□□□□□ -1.78
PDLIM2Q96JY6 AC103843.2-201ENST00000530523 682 ntBASIC3.96□□□□□ -1.78
PDLIM2Q96JY6 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC3.96□□□□□ -1.78
PDLIM2Q96JY6 ARL6IP1P1-201ENST00000545836 610 ntBASIC3.96□□□□□ -1.78
PDLIM2Q96JY6 AL132780.1-201ENST00000548819 556 ntTSL 4 BASIC3.96□□□□□ -1.78
PDLIM2Q96JY6 PARP1P2-201ENST00000556806 195 ntBASIC3.96□□□□□ -1.78
PDLIM2Q96JY6 NCAPGP2-201ENST00000557911 754 ntBASIC3.96□□□□□ -1.78
PDLIM2Q96JY6 AC012182.1-201ENST00000570133 895 ntBASIC3.96□□□□□ -1.78
PDLIM2Q96JY6 MIR4697-201ENST00000582977 78 ntBASIC3.96□□□□□ -1.78
PDLIM2Q96JY6 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC3.96□□□□□ -1.78
PDLIM2Q96JY6 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC3.96□□□□□ -1.78
PDLIM2Q96JY6 U1.23-201ENST00000610293 146 ntBASIC3.96□□□□□ -1.78
PDLIM2Q96JY6 RNU1-68P-201ENST00000615382 146 ntBASIC3.96□□□□□ -1.78
PDLIM2Q96JY6 U1.39-201ENST00000621562 146 ntBASIC3.96□□□□□ -1.78
PDLIM2Q96JY6 ATM-228ENST00000639240 498 ntTSL 5 BASIC3.96□□□□□ -1.78
PDLIM2Q96JY6 ATM-230ENST00000640388 578 ntTSL 5 BASIC3.96□□□□□ -1.78
PDLIM2Q96JY6 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC3.96□□□□□ -1.78
PDLIM2Q96JY6 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC3.95□□□□□ -1.78
PDLIM2Q96JY6 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC3.95□□□□□ -1.78
PDLIM2Q96JY6 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
PDLIM2Q96JY6 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
PDLIM2Q96JY6 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
PDLIM2Q96JY6 AP004289.2-201ENST00000444413 1457 ntBASIC3.95□□□□□ -1.78
PDLIM2Q96JY6 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC3.95□□□□□ -1.78
PDLIM2Q96JY6 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC3.95□□□□□ -1.78
PDLIM2Q96JY6 AC073343.1-201ENST00000328239 651 ntBASIC3.95□□□□□ -1.78
PDLIM2Q96JY6 SNORA62.1-201ENST00000364287 154 ntBASIC3.95□□□□□ -1.78
PDLIM2Q96JY6 RNVU1-3-201ENST00000364313 161 ntBASIC3.95□□□□□ -1.78
PDLIM2Q96JY6 RNU4-66P-201ENST00000365199 138 ntBASIC3.95□□□□□ -1.78
PDLIM2Q96JY6 RPS7P15-201ENST00000415804 584 ntBASIC3.95□□□□□ -1.78
PDLIM2Q96JY6 AC108032.1-201ENST00000416706 207 ntBASIC3.95□□□□□ -1.78
PDLIM2Q96JY6 AL691449.1-201ENST00000426570 421 ntBASIC3.95□□□□□ -1.78
PDLIM2Q96JY6 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC3.95□□□□□ -1.78
PDLIM2Q96JY6 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC3.95□□□□□ -1.78
PDLIM2Q96JY6 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC3.95□□□□□ -1.78
PDLIM2Q96JY6 AC091390.1-201ENST00000433904 331 ntBASIC3.95□□□□□ -1.78
PDLIM2Q96JY6 MTATP6P16-201ENST00000434543 526 ntBASIC3.95□□□□□ -1.78
PDLIM2Q96JY6 AC009969.1-201ENST00000438726 172 ntBASIC3.95□□□□□ -1.78
PDLIM2Q96JY6 AL353691.1-201ENST00000451332 387 ntBASIC3.95□□□□□ -1.78
PDLIM2Q96JY6 HMGN2P7-201ENST00000456186 273 ntBASIC3.95□□□□□ -1.78
PDLIM2Q96JY6 RNU7-182P-201ENST00000459009 62 ntBASIC3.95□□□□□ -1.78
PDLIM2Q96JY6 SNORD19B-201ENST00000459623 84 ntBASIC3.95□□□□□ -1.78
PDLIM2Q96JY6 AP002884.2-201ENST00000471647 395 ntBASIC3.95□□□□□ -1.78
PDLIM2Q96JY6 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC3.95□□□□□ -1.78
PDLIM2Q96JY6 AC126389.1-201ENST00000477436 290 ntBASIC3.95□□□□□ -1.78
PDLIM2Q96JY6 HMGB1P21-201ENST00000502313 581 ntBASIC3.95□□□□□ -1.78
PDLIM2Q96JY6 COX7A2P2-201ENST00000505291 250 ntBASIC3.95□□□□□ -1.78
PDLIM2Q96JY6 RN7SKP219-201ENST00000516825 296 ntBASIC3.95□□□□□ -1.78
PDLIM2Q96JY6 HMGB1P41-201ENST00000520234 440 ntBASIC3.95□□□□□ -1.78
PDLIM2Q96JY6 AC245166.1-201ENST00000521012 253 ntBASIC3.95□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 112.5 ms