Protein–RNA interactions for Protein: Q96DC8

ECHDC3, Enoyl-CoA hydratase domain-containing protein 3, mitochondrial, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3Q96DC8 AP003386.1-201ENST00000526509 504 ntTSL 3 BASIC2.33□□□□□ -2.04
ECHDC3Q96DC8 CCDC7-207ENST00000535327 700 ntAPPRIS ALT2 TSL 1 (best) BASIC2.33□□□□□ -2.04
ECHDC3Q96DC8 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
ECHDC3Q96DC8 AP002770.2-201ENST00000543613 532 ntBASIC2.33□□□□□ -2.04
ECHDC3Q96DC8 AL512347.1-201ENST00000566420 503 ntBASIC2.33□□□□□ -2.04
ECHDC3Q96DC8 SNORD53-201ENST00000579969 78 ntBASIC2.33□□□□□ -2.04
ECHDC3Q96DC8 OR4K7P-201ENST00000580232 945 ntBASIC2.33□□□□□ -2.04
ECHDC3Q96DC8 MIR4435-1-201ENST00000582552 80 ntBASIC2.33□□□□□ -2.04
ECHDC3Q96DC8 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC2.33□□□□□ -2.04
ECHDC3Q96DC8 AL645944.1-201ENST00000603857 493 ntBASIC2.33□□□□□ -2.04
ECHDC3Q96DC8 OR10AB1P-201ENST00000609613 938 ntBASIC2.33□□□□□ -2.04
ECHDC3Q96DC8 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC2.33□□□□□ -2.04
ECHDC3Q96DC8 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC2.33□□□□□ -2.04
ECHDC3Q96DC8 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC2.33□□□□□ -2.04
ECHDC3Q96DC8 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.33□□□□□ -2.04
ECHDC3Q96DC8 MIR7515-201ENST00000637837 67 ntBASIC2.33□□□□□ -2.04
ECHDC3Q96DC8 AL138713.1-201ENST00000624026 2130 ntBASIC2.33□□□□□ -2.04
ECHDC3Q96DC8 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.33□□□□□ -2.04
ECHDC3Q96DC8 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.32□□□□□ -2.04
ECHDC3Q96DC8 AC092447.10-201ENST00000620607 1652 ntBASIC2.32□□□□□ -2.04
ECHDC3Q96DC8 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
ECHDC3Q96DC8 AL139276.1-201ENST00000311910 1001 ntBASIC2.32□□□□□ -2.04
ECHDC3Q96DC8 SNORA23-201ENST00000365128 182 ntBASIC2.32□□□□□ -2.04
ECHDC3Q96DC8 RNU2-33P-201ENST00000410344 192 ntBASIC2.32□□□□□ -2.04
ECHDC3Q96DC8 MTND1P21-201ENST00000412991 285 ntBASIC2.32□□□□□ -2.04
ECHDC3Q96DC8 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC2.32□□□□□ -2.04
ECHDC3Q96DC8 LINC01867-201ENST00000435357 604 ntTSL 2 BASIC2.32□□□□□ -2.04
ECHDC3Q96DC8 UBE2V1P13-201ENST00000436983 439 ntBASIC2.32□□□□□ -2.04
ECHDC3Q96DC8 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
ECHDC3Q96DC8 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC2.32□□□□□ -2.04
ECHDC3Q96DC8 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC2.32□□□□□ -2.04
ECHDC3Q96DC8 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC2.32□□□□□ -2.04
ECHDC3Q96DC8 AC135721.1-201ENST00000497954 479 ntBASIC2.32□□□□□ -2.04
ECHDC3Q96DC8 LINC02201-201ENST00000508992 468 ntTSL 2 BASIC2.32□□□□□ -2.04
ECHDC3Q96DC8 AC008549.1-201ENST00000512900 643 ntBASIC2.32□□□□□ -2.04
ECHDC3Q96DC8 AC112673.1-201ENST00000513168 575 ntBASIC2.32□□□□□ -2.04
ECHDC3Q96DC8 RNA5SP281-201ENST00000516504 135 ntBASIC2.32□□□□□ -2.04
ECHDC3Q96DC8 RNA5SP82-201ENST00000516707 92 ntBASIC2.32□□□□□ -2.04
ECHDC3Q96DC8 AC091163.3-201ENST00000518269 1144 ntBASIC2.32□□□□□ -2.04
ECHDC3Q96DC8 SUB1P1-201ENST00000524415 382 ntBASIC2.32□□□□□ -2.04
ECHDC3Q96DC8 AC007115.1-201ENST00000546853 234 ntBASIC2.32□□□□□ -2.04
ECHDC3Q96DC8 AC105137.2-201ENST00000569073 466 ntBASIC2.32□□□□□ -2.04
ECHDC3Q96DC8 MIR5694-201ENST00000581190 76 ntBASIC2.32□□□□□ -2.04
ECHDC3Q96DC8 MIR6895-201ENST00000613497 78 ntBASIC2.32□□□□□ -2.04
ECHDC3Q96DC8 AC009268.2-201ENST00000621925 457 ntBASIC2.32□□□□□ -2.04
ECHDC3Q96DC8 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.32□□□□□ -2.04
ECHDC3Q96DC8 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.32□□□□□ -2.04
ECHDC3Q96DC8 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
ECHDC3Q96DC8 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
ECHDC3Q96DC8 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.31□□□□□ -2.04
ECHDC3Q96DC8 RNU6-97P-201ENST00000363387 104 ntBASIC2.31□□□□□ -2.04
ECHDC3Q96DC8 RNU1-39P-201ENST00000383897 165 ntBASIC2.31□□□□□ -2.04
ECHDC3Q96DC8 RNU6-114P-201ENST00000384704 105 ntBASIC2.31□□□□□ -2.04
ECHDC3Q96DC8 MIR144-201ENST00000384886 86 ntBASIC2.31□□□□□ -2.04
ECHDC3Q96DC8 ERHP2-201ENST00000402323 299 ntBASIC2.31□□□□□ -2.04
ECHDC3Q96DC8 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
ECHDC3Q96DC8 AC107081.1-201ENST00000414975 361 ntBASIC2.31□□□□□ -2.04
ECHDC3Q96DC8 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC2.31□□□□□ -2.04
ECHDC3Q96DC8 RPS15AP28-201ENST00000435088 386 ntBASIC2.31□□□□□ -2.04
ECHDC3Q96DC8 AC104563.1-201ENST00000476147 376 ntBASIC2.31□□□□□ -2.04
ECHDC3Q96DC8 RBM43P1-201ENST00000476891 1081 ntBASIC2.31□□□□□ -2.04
ECHDC3Q96DC8 FAM172BP-201ENST00000487497 1089 ntBASIC2.31□□□□□ -2.04
ECHDC3Q96DC8 HMGB1P36-201ENST00000487709 576 ntBASIC2.31□□□□□ -2.04
ECHDC3Q96DC8 SUMO2P6-201ENST00000505273 288 ntBASIC2.31□□□□□ -2.04
ECHDC3Q96DC8 AC096571.1-202ENST00000506634 735 ntBASIC2.31□□□□□ -2.04
ECHDC3Q96DC8 AC021146.8-201ENST00000507455 733 ntBASIC2.31□□□□□ -2.04
ECHDC3Q96DC8 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC2.31□□□□□ -2.04
ECHDC3Q96DC8 AC079395.1-201ENST00000510981 262 ntBASIC2.31□□□□□ -2.04
ECHDC3Q96DC8 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC2.31□□□□□ -2.04
ECHDC3Q96DC8 AC009063.1-201ENST00000563342 702 ntBASIC2.31□□□□□ -2.04
ECHDC3Q96DC8 AC217774.1-201ENST00000578936 517 ntTSL 4 BASIC2.31□□□□□ -2.04
ECHDC3Q96DC8 AC136601.2-201ENST00000604356 474 ntBASIC2.31□□□□□ -2.04
ECHDC3Q96DC8 BNIP3P31-201ENST00000604515 566 ntBASIC2.31□□□□□ -2.04
ECHDC3Q96DC8 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.31□□□□□ -2.04
ECHDC3Q96DC8 AC104237.2-201ENST00000612456 443 ntBASIC2.31□□□□□ -2.04
ECHDC3Q96DC8 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC2.31□□□□□ -2.04
ECHDC3Q96DC8 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.31□□□□□ -2.04
ECHDC3Q96DC8 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
ECHDC3Q96DC8 ELF2P3-201ENST00000445099 1506 ntBASIC2.31□□□□□ -2.04
ECHDC3Q96DC8 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC2.31□□□□□ -2.04
ECHDC3Q96DC8 TRIQK-201ENST00000378861 1596 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
ECHDC3Q96DC8 MTND5P6-201ENST00000422338 1798 ntBASIC2.31□□□□□ -2.04
ECHDC3Q96DC8 DDX10P1-201ENST00000448545 1933 ntBASIC2.3□□□□□ -2.04
ECHDC3Q96DC8 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.3□□□□□ -2.04
ECHDC3Q96DC8 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
ECHDC3Q96DC8 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.3□□□□□ -2.04
ECHDC3Q96DC8 SNORA38-201ENST00000363946 132 ntBASIC2.3□□□□□ -2.04
ECHDC3Q96DC8 AL590084.2-201ENST00000401481 382 ntBASIC2.3□□□□□ -2.04
ECHDC3Q96DC8 BTF3P7-201ENST00000407097 488 ntBASIC2.3□□□□□ -2.04
ECHDC3Q96DC8 SNORA3.2-201ENST00000408221 125 ntBASIC2.3□□□□□ -2.04
ECHDC3Q96DC8 AL451054.2-201ENST00000420896 202 ntBASIC2.3□□□□□ -2.04
ECHDC3Q96DC8 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC2.3□□□□□ -2.04
ECHDC3Q96DC8 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC2.3□□□□□ -2.04
ECHDC3Q96DC8 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC2.3□□□□□ -2.04
ECHDC3Q96DC8 AC114786.4-201ENST00000508771 728 ntBASIC2.3□□□□□ -2.04
ECHDC3Q96DC8 AC114797.1-201ENST00000514003 728 ntBASIC2.3□□□□□ -2.04
ECHDC3Q96DC8 RNU6-150P-201ENST00000516237 95 ntBASIC2.3□□□□□ -2.04
ECHDC3Q96DC8 SNORA31.11-201ENST00000516528 139 ntBASIC2.3□□□□□ -2.04
ECHDC3Q96DC8 AC021451.1-201ENST00000523498 1129 ntBASIC2.3□□□□□ -2.04
ECHDC3Q96DC8 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC2.3□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 87 ms