Protein–RNA interactions for Protein: Q96AA3

RFT1, Protein RFT1 homolog, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFT1Q96AA3 AC103843.2-201ENST00000530523 682 ntBASIC2.87□□□□□ -1.95
RFT1Q96AA3 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC2.87□□□□□ -1.95
RFT1Q96AA3 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC2.87□□□□□ -1.95
RFT1Q96AA3 AC034105.3-201ENST00000565294 442 ntBASIC2.87□□□□□ -1.95
RFT1Q96AA3 AC015917.1-201ENST00000579654 510 ntBASIC2.87□□□□□ -1.95
RFT1Q96AA3 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC2.87□□□□□ -1.95
RFT1Q96AA3 AC080078.2-201ENST00000603766 501 ntBASIC2.87□□□□□ -1.95
RFT1Q96AA3 AL162713.1-201ENST00000604480 262 ntBASIC2.87□□□□□ -1.95
RFT1Q96AA3 AL359999.1-201ENST00000604513 294 ntBASIC2.87□□□□□ -1.95
RFT1Q96AA3 AC012360.2-201ENST00000609349 391 ntBASIC2.87□□□□□ -1.95
RFT1Q96AA3 MIR7851-201ENST00000610611 160 ntBASIC2.87□□□□□ -1.95
RFT1Q96AA3 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC2.87□□□□□ -1.95
RFT1Q96AA3 AC009878.1-201ENST00000621819 340 ntBASIC2.87□□□□□ -1.95
RFT1Q96AA3 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC2.87□□□□□ -1.95
RFT1Q96AA3 AC010149.2-201ENST00000637608 315 ntBASIC2.87□□□□□ -1.95
RFT1Q96AA3 IL33-203ENST00000456383 2501 ntTSL 5 BASIC2.87□□□□□ -1.95
RFT1Q96AA3 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
RFT1Q96AA3 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
RFT1Q96AA3 NPVF-201ENST00000222674 1190 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
RFT1Q96AA3 Y_RNA.41-201ENST00000362646 102 ntBASIC2.86□□□□□ -1.95
RFT1Q96AA3 RNU1-64P-201ENST00000365443 163 ntBASIC2.86□□□□□ -1.95
RFT1Q96AA3 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC2.86□□□□□ -1.95
RFT1Q96AA3 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC2.86□□□□□ -1.95
RFT1Q96AA3 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC2.86□□□□□ -1.95
RFT1Q96AA3 RNU2-62P-201ENST00000410868 191 ntBASIC2.86□□□□□ -1.95
RFT1Q96AA3 ELOCP17-201ENST00000414751 326 ntBASIC2.86□□□□□ -1.95
RFT1Q96AA3 MTCO3P41-201ENST00000414801 328 ntBASIC2.86□□□□□ -1.95
RFT1Q96AA3 ZNF90P2-204ENST00000419323 1075 ntBASIC2.86□□□□□ -1.95
RFT1Q96AA3 RBM6-203ENST00000421682 684 ntTSL 2 BASIC2.86□□□□□ -1.95
RFT1Q96AA3 MTCO2P34-201ENST00000421994 607 ntBASIC2.86□□□□□ -1.95
RFT1Q96AA3 AL139281.1-201ENST00000422120 335 ntBASIC2.86□□□□□ -1.95
RFT1Q96AA3 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC2.86□□□□□ -1.95
RFT1Q96AA3 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC2.86□□□□□ -1.95
RFT1Q96AA3 AL031183.1-201ENST00000457667 207 ntBASIC2.86□□□□□ -1.95
RFT1Q96AA3 TPT1P7-201ENST00000458300 517 ntBASIC2.86□□□□□ -1.95
RFT1Q96AA3 RPL7P15-201ENST00000461190 712 ntBASIC2.86□□□□□ -1.95
RFT1Q96AA3 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC2.86□□□□□ -1.95
RFT1Q96AA3 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC2.86□□□□□ -1.95
RFT1Q96AA3 AC079140.3-201ENST00000511111 550 ntBASIC2.86□□□□□ -1.95
RFT1Q96AA3 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC2.86□□□□□ -1.95
RFT1Q96AA3 SNORA31.3-201ENST00000516029 96 ntBASIC2.86□□□□□ -1.95
RFT1Q96AA3 AC107934.1-201ENST00000522215 217 ntBASIC2.86□□□□□ -1.95
RFT1Q96AA3 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC2.86□□□□□ -1.95
RFT1Q96AA3 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC2.86□□□□□ -1.95
RFT1Q96AA3 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC2.86□□□□□ -1.95
RFT1Q96AA3 AC027807.1-201ENST00000559921 996 ntBASIC2.86□□□□□ -1.95
RFT1Q96AA3 MIR3611-201ENST00000584484 83 ntBASIC2.86□□□□□ -1.95
RFT1Q96AA3 AC079089.3-201ENST00000603094 673 ntBASIC2.86□□□□□ -1.95
RFT1Q96AA3 AC008277.2-201ENST00000605196 797 ntBASIC2.86□□□□□ -1.95
RFT1Q96AA3 AC121334.2-201ENST00000605387 271 ntBASIC2.86□□□□□ -1.95
RFT1Q96AA3 BX664608.1-201ENST00000610519 487 ntBASIC2.86□□□□□ -1.95
RFT1Q96AA3 AC027807.2-201ENST00000616099 408 ntBASIC2.86□□□□□ -1.95
RFT1Q96AA3 AC091903.1-201ENST00000624322 454 ntBASIC2.86□□□□□ -1.95
RFT1Q96AA3 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC2.86□□□□□ -1.95
RFT1Q96AA3 BCLAF1P1-201ENST00000505813 2752 ntBASIC2.86□□□□□ -1.95
RFT1Q96AA3 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC2.86□□□□□ -1.95
RFT1Q96AA3 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
RFT1Q96AA3 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
RFT1Q96AA3 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC2.85□□□□□ -1.95
RFT1Q96AA3 Z82195.2-201ENST00000612348 18351 ntBASIC2.85□□□□□ -1.95
RFT1Q96AA3 MTND5P29-201ENST00000458676 1807 ntBASIC2.85□□□□□ -1.95
RFT1Q96AA3 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.85□□□□□ -1.95
RFT1Q96AA3 Y_RNA.3-201ENST00000362331 103 ntBASIC2.85□□□□□ -1.95
RFT1Q96AA3 RNU1-70P-201ENST00000362618 164 ntBASIC2.85□□□□□ -1.95
RFT1Q96AA3 SNORA57.1-201ENST00000391227 145 ntBASIC2.85□□□□□ -1.95
RFT1Q96AA3 HIST1H2APS3-201ENST00000403259 134 ntBASIC2.85□□□□□ -1.95
RFT1Q96AA3 RNU6ATAC-201ENST00000408749 126 ntBASIC2.85□□□□□ -1.95
RFT1Q96AA3 BX323014.1-201ENST00000412876 237 ntBASIC2.85□□□□□ -1.95
RFT1Q96AA3 AF274854.1-201ENST00000413236 615 ntBASIC2.85□□□□□ -1.95
RFT1Q96AA3 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC2.85□□□□□ -1.95
RFT1Q96AA3 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC2.85□□□□□ -1.95
RFT1Q96AA3 CYCSP46-201ENST00000423569 204 ntBASIC2.85□□□□□ -1.95
RFT1Q96AA3 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC2.85□□□□□ -1.95
RFT1Q96AA3 AC007919.1-201ENST00000429380 217 ntBASIC2.85□□□□□ -1.95
RFT1Q96AA3 CYCSP4-201ENST00000429682 331 ntBASIC2.85□□□□□ -1.95
RFT1Q96AA3 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC2.85□□□□□ -1.95
RFT1Q96AA3 HSPD1P21-201ENST00000436541 245 ntBASIC2.85□□□□□ -1.95
RFT1Q96AA3 AL031667.1-201ENST00000440222 725 ntBASIC2.85□□□□□ -1.95
RFT1Q96AA3 RPL23AP58-201ENST00000440453 469 ntBASIC2.85□□□□□ -1.95
RFT1Q96AA3 USP9YP29-201ENST00000445112 563 ntBASIC2.85□□□□□ -1.95
RFT1Q96AA3 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC2.85□□□□□ -1.95
RFT1Q96AA3 AC087588.1-201ENST00000462203 316 ntBASIC2.85□□□□□ -1.95
RFT1Q96AA3 KC877373.1-201ENST00000479066 408 ntBASIC2.85□□□□□ -1.95
RFT1Q96AA3 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC2.85□□□□□ -1.95
RFT1Q96AA3 FCF1P8-201ENST00000510322 597 ntBASIC2.85□□□□□ -1.95
RFT1Q96AA3 AF131216.2-201ENST00000512316 564 ntBASIC2.85□□□□□ -1.95
RFT1Q96AA3 APOOP4-201ENST00000513530 597 ntBASIC2.85□□□□□ -1.95
RFT1Q96AA3 FABP5P5-201ENST00000515537 406 ntBASIC2.85□□□□□ -1.95
RFT1Q96AA3 IGKV2-26-201ENST00000518305 343 ntBASIC2.85□□□□□ -1.95
RFT1Q96AA3 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
RFT1Q96AA3 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC2.85□□□□□ -1.95
RFT1Q96AA3 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC2.85□□□□□ -1.95
RFT1Q96AA3 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC2.85□□□□□ -1.95
RFT1Q96AA3 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC2.85□□□□□ -1.95
RFT1Q96AA3 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC2.85□□□□□ -1.95
RFT1Q96AA3 MIR3118-1-201ENST00000581787 76 ntBASIC2.85□□□□□ -1.95
RFT1Q96AA3 AC006504.3-201ENST00000586818 523 ntBASIC2.85□□□□□ -1.95
RFT1Q96AA3 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC2.85□□□□□ -1.95
RFT1Q96AA3 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC2.85□□□□□ -1.95
RFT1Q96AA3 AC012065.4-201ENST00000602445 679 ntBASIC2.85□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 148.9 ms