Protein–RNA interactions for Protein: Q93096

PTP4A1, Protein tyrosine phosphatase type IVA 1, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1Q93096 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC2.85□□□□□ -1.95
PTP4A1Q93096 MTND4LP18-201ENST00000526864 291 ntBASIC2.85□□□□□ -1.95
PTP4A1Q93096 AC011979.2-201ENST00000527568 352 ntBASIC2.85□□□□□ -1.95
PTP4A1Q93096 AC087286.1-201ENST00000560712 568 ntTSL 3 BASIC2.85□□□□□ -1.95
PTP4A1Q93096 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC2.85□□□□□ -1.95
PTP4A1Q93096 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC2.85□□□□□ -1.95
PTP4A1Q93096 AP001981.2-201ENST00000603241 418 ntBASIC2.85□□□□□ -1.95
PTP4A1Q93096 ELOCP35-201ENST00000604289 336 ntBASIC2.85□□□□□ -1.95
PTP4A1Q93096 AL157817.1-201ENST00000614264 790 ntBASIC2.85□□□□□ -1.95
PTP4A1Q93096 uc_338.12-201ENST00000616344 181 ntBASIC2.85□□□□□ -1.95
PTP4A1Q93096 AC009159.1-201ENST00000618386 642 ntBASIC2.85□□□□□ -1.95
PTP4A1Q93096 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC2.85□□□□□ -1.95
PTP4A1Q93096 U2.21-201ENST00000637295 81 ntBASIC2.85□□□□□ -1.95
PTP4A1Q93096 OR8B1P-202ENST00000641132 1178 ntBASIC2.85□□□□□ -1.95
PTP4A1Q93096 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
PTP4A1Q93096 AC010889.1-201ENST00000566193 2666 ntBASIC2.85□□□□□ -1.95
PTP4A1Q93096 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC2.84□□□□□ -1.95
PTP4A1Q93096 ADAM3A-203ENST00000461344 2157 ntBASIC2.84□□□□□ -1.95
PTP4A1Q93096 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC2.84□□□□□ -1.95
PTP4A1Q93096 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC2.84□□□□□ -1.95
PTP4A1Q93096 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC2.84□□□□□ -1.95
PTP4A1Q93096 RNU6-501P-201ENST00000364072 100 ntBASIC2.84□□□□□ -1.95
PTP4A1Q93096 RNU6-461P-201ENST00000364195 107 ntBASIC2.84□□□□□ -1.95
PTP4A1Q93096 RNU6-512P-201ENST00000364438 103 ntBASIC2.84□□□□□ -1.95
PTP4A1Q93096 RNY3P13-201ENST00000365542 102 ntBASIC2.84□□□□□ -1.95
PTP4A1Q93096 RNU1-109P-201ENST00000383960 147 ntBASIC2.84□□□□□ -1.95
PTP4A1Q93096 RNU6-701P-201ENST00000384059 107 ntBASIC2.84□□□□□ -1.95
PTP4A1Q93096 RPL19P1-201ENST00000411635 428 ntBASIC2.84□□□□□ -1.95
PTP4A1Q93096 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC2.84□□□□□ -1.95
PTP4A1Q93096 AL389915.1-201ENST00000422463 466 ntBASIC2.84□□□□□ -1.95
PTP4A1Q93096 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC2.84□□□□□ -1.95
PTP4A1Q93096 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC2.84□□□□□ -1.95
PTP4A1Q93096 MTND4P25-201ENST00000441039 533 ntBASIC2.84□□□□□ -1.95
PTP4A1Q93096 AL591719.1-201ENST00000444669 744 ntBASIC2.84□□□□□ -1.95
PTP4A1Q93096 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC2.84□□□□□ -1.95
PTP4A1Q93096 ST13P20-201ENST00000447996 1065 ntBASIC2.84□□□□□ -1.95
PTP4A1Q93096 ELOCP23-201ENST00000452014 332 ntBASIC2.84□□□□□ -1.95
PTP4A1Q93096 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC2.84□□□□□ -1.95
PTP4A1Q93096 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
PTP4A1Q93096 RBM43P1-201ENST00000476891 1081 ntBASIC2.84□□□□□ -1.95
PTP4A1Q93096 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC2.84□□□□□ -1.95
PTP4A1Q93096 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC2.84□□□□□ -1.95
PTP4A1Q93096 RNA5SP471-201ENST00000516971 106 ntBASIC2.84□□□□□ -1.95
PTP4A1Q93096 SNORD19.2-201ENST00000516978 73 ntBASIC2.84□□□□□ -1.95
PTP4A1Q93096 IL18-204ENST00000528832 795 ntAPPRIS P3 TSL 3 BASIC2.84□□□□□ -1.95
PTP4A1Q93096 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC2.84□□□□□ -1.95
PTP4A1Q93096 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC2.84□□□□□ -1.95
PTP4A1Q93096 MTCO3P13-201ENST00000577757 781 ntBASIC2.84□□□□□ -1.95
PTP4A1Q93096 AP000403.1-201ENST00000603349 851 ntBASIC2.84□□□□□ -1.95
PTP4A1Q93096 BNIP3P9-201ENST00000603714 553 ntBASIC2.84□□□□□ -1.95
PTP4A1Q93096 AL359999.1-201ENST00000604513 294 ntBASIC2.84□□□□□ -1.95
PTP4A1Q93096 UBE2Q2P2-203ENST00000613592 761 ntBASIC2.84□□□□□ -1.95
PTP4A1Q93096 AC140725.3-201ENST00000616193 880 ntBASIC2.84□□□□□ -1.95
PTP4A1Q93096 MIR7975-201ENST00000619350 68 ntBASIC2.84□□□□□ -1.95
PTP4A1Q93096 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC2.84□□□□□ -1.95
PTP4A1Q93096 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC2.84□□□□□ -1.95
PTP4A1Q93096 MIR6733-201ENST00000635723 61 ntBASIC2.84□□□□□ -1.95
PTP4A1Q93096 AC006927.3-201ENST00000638789 384 ntBASIC2.84□□□□□ -1.95
PTP4A1Q93096 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC2.84□□□□□ -1.96
PTP4A1Q93096 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC2.84□□□□□ -1.96
PTP4A1Q93096 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC2.84□□□□□ -1.96
PTP4A1Q93096 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC2.84□□□□□ -1.96
PTP4A1Q93096 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC2.83□□□□□ -1.96
PTP4A1Q93096 LINC01419-201ENST00000522365 1521 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
PTP4A1Q93096 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC2.83□□□□□ -1.96
PTP4A1Q93096 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC2.83□□□□□ -1.96
PTP4A1Q93096 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC2.83□□□□□ -1.96
PTP4A1Q93096 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC2.83□□□□□ -1.96
PTP4A1Q93096 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
PTP4A1Q93096 CFHR4-201ENST00000251424 1292 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
PTP4A1Q93096 LY96-201ENST00000284818 607 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
PTP4A1Q93096 MIR23B-201ENST00000384832 97 ntBASIC2.83□□□□□ -1.96
PTP4A1Q93096 U3.26-201ENST00000391236 204 ntBASIC2.83□□□□□ -1.96
PTP4A1Q93096 RPS20P2-201ENST00000402520 389 ntBASIC2.83□□□□□ -1.96
PTP4A1Q93096 RPL7P25-201ENST00000404151 721 ntBASIC2.83□□□□□ -1.96
PTP4A1Q93096 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC2.83□□□□□ -1.96
PTP4A1Q93096 AL353729.1-201ENST00000425044 720 ntBASIC2.83□□□□□ -1.96
PTP4A1Q93096 YME1L1P1-201ENST00000429435 297 ntBASIC2.83□□□□□ -1.96
PTP4A1Q93096 AL359878.2-201ENST00000435531 407 ntTSL 3 BASIC2.83□□□□□ -1.96
PTP4A1Q93096 AL445687.1-201ENST00000439946 251 ntBASIC2.83□□□□□ -1.96
PTP4A1Q93096 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC2.83□□□□□ -1.96
PTP4A1Q93096 AC099342.1-201ENST00000446399 1124 ntTSL 3 BASIC2.83□□□□□ -1.96
PTP4A1Q93096 RPL23AP20-201ENST00000447965 421 ntBASIC2.83□□□□□ -1.96
PTP4A1Q93096 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC2.83□□□□□ -1.96
PTP4A1Q93096 UQCRHP3-201ENST00000451503 251 ntBASIC2.83□□□□□ -1.96
PTP4A1Q93096 AC098591.2-201ENST00000510152 315 ntBASIC2.83□□□□□ -1.96
PTP4A1Q93096 RNU2-10P-201ENST00000516375 211 ntBASIC2.83□□□□□ -1.96
PTP4A1Q93096 MRPS36P3-201ENST00000519284 130 ntBASIC2.83□□□□□ -1.96
PTP4A1Q93096 AC109329.2-201ENST00000519658 482 ntBASIC2.83□□□□□ -1.96
PTP4A1Q93096 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC2.83□□□□□ -1.96
PTP4A1Q93096 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC2.83□□□□□ -1.96
PTP4A1Q93096 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC2.83□□□□□ -1.96
PTP4A1Q93096 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC2.83□□□□□ -1.96
PTP4A1Q93096 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC2.83□□□□□ -1.96
PTP4A1Q93096 AC024619.4-201ENST00000580924 316 ntBASIC2.83□□□□□ -1.96
PTP4A1Q93096 MIR3117-201ENST00000584034 78 ntBASIC2.83□□□□□ -1.96
PTP4A1Q93096 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC2.83□□□□□ -1.96
PTP4A1Q93096 VN1R90P-201ENST00000595717 726 ntBASIC2.83□□□□□ -1.96
PTP4A1Q93096 AC104763.2-201ENST00000604179 382 ntBASIC2.83□□□□□ -1.96
PTP4A1Q93096 AC073657.2-201ENST00000605661 303 ntBASIC2.83□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 103.1 ms