Protein–RNA interactions for Protein: Q92994

BRF1, Transcription factor IIIB 90 kDa subunit, humanhuman

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1Q92994 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
BRF1Q92994 AC006116.10-201ENST00000591836 581 ntBASIC4.74□□□□□ -1.65
BRF1Q92994 AC012669.1-201ENST00000603209 283 ntBASIC4.74□□□□□ -1.65
BRF1Q92994 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC4.74□□□□□ -1.65
BRF1Q92994 RNU6ATAC35P-201ENST00000609276 444 ntBASIC4.74□□□□□ -1.65
BRF1Q92994 MIR6868-201ENST00000611215 58 ntBASIC4.74□□□□□ -1.65
BRF1Q92994 AC004696.1-201ENST00000614345 607 ntBASIC4.74□□□□□ -1.65
BRF1Q92994 AL138726.1-201ENST00000614873 333 ntBASIC4.74□□□□□ -1.65
BRF1Q92994 AC131238.1-201ENST00000617135 328 ntBASIC4.74□□□□□ -1.65
BRF1Q92994 AC244517.12-201ENST00000623581 663 ntBASIC4.74□□□□□ -1.65
BRF1Q92994 MIR6830-201ENST00000636015 70 ntBASIC4.74□□□□□ -1.65
BRF1Q92994 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC4.74□□□□□ -1.65
BRF1Q92994 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
BRF1Q92994 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
BRF1Q92994 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC4.74□□□□□ -1.65
BRF1Q92994 MTND5P10-201ENST00000603719 1809 ntBASIC4.74□□□□□ -1.65
BRF1Q92994 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC4.74□□□□□ -1.65
BRF1Q92994 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC4.74□□□□□ -1.65
BRF1Q92994 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
BRF1Q92994 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
BRF1Q92994 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC4.73□□□□□ -1.65
BRF1Q92994 RNU6-263P-201ENST00000363811 107 ntBASIC4.73□□□□□ -1.65
BRF1Q92994 SNORA22B-201ENST00000383876 138 ntBASIC4.73□□□□□ -1.65
BRF1Q92994 RNU6-639P-201ENST00000384074 107 ntBASIC4.73□□□□□ -1.65
BRF1Q92994 RNA5SP219-201ENST00000390940 113 ntBASIC4.73□□□□□ -1.65
BRF1Q92994 AC110754.1-201ENST00000399740 601 ntBASIC4.73□□□□□ -1.65
BRF1Q92994 AC099677.1-201ENST00000420575 175 ntBASIC4.73□□□□□ -1.65
BRF1Q92994 PMCHL1-202ENST00000423102 261 ntBASIC4.73□□□□□ -1.65
BRF1Q92994 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC4.73□□□□□ -1.65
BRF1Q92994 CYCSP43-201ENST00000438233 310 ntBASIC4.73□□□□□ -1.65
BRF1Q92994 AL121871.1-201ENST00000443413 436 ntBASIC4.73□□□□□ -1.65
BRF1Q92994 AL137792.2-201ENST00000443484 235 ntBASIC4.73□□□□□ -1.65
BRF1Q92994 RPL32P28-201ENST00000443577 397 ntBASIC4.73□□□□□ -1.65
BRF1Q92994 AL451050.1-201ENST00000450126 415 ntBASIC4.73□□□□□ -1.65
BRF1Q92994 RPS11P1-201ENST00000451072 473 ntBASIC4.73□□□□□ -1.65
BRF1Q92994 LINC01768-201ENST00000453347 476 ntTSL 3 BASIC4.73□□□□□ -1.65
BRF1Q92994 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC4.73□□□□□ -1.65
BRF1Q92994 Y_RNA.653-201ENST00000459091 95 ntBASIC4.73□□□□□ -1.65
BRF1Q92994 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC4.73□□□□□ -1.65
BRF1Q92994 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC4.73□□□□□ -1.65
BRF1Q92994 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC4.73□□□□□ -1.65
BRF1Q92994 AC018630.1-201ENST00000541376 925 ntBASIC4.73□□□□□ -1.65
BRF1Q92994 GNRHR2P1-201ENST00000555315 631 ntBASIC4.73□□□□□ -1.65
BRF1Q92994 AC138761.3-201ENST00000579993 334 ntBASIC4.73□□□□□ -1.65
BRF1Q92994 AF038458.1-201ENST00000588406 262 ntBASIC4.73□□□□□ -1.65
BRF1Q92994 AC008737.2-201ENST00000599446 118 ntBASIC4.73□□□□□ -1.65
BRF1Q92994 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC4.73□□□□□ -1.65
BRF1Q92994 AC019193.3-201ENST00000609144 554 ntBASIC4.73□□□□□ -1.65
BRF1Q92994 MIR378J-201ENST00000611988 109 ntBASIC4.73□□□□□ -1.65
BRF1Q92994 MTND5P42-201ENST00000637720 498 ntBASIC4.73□□□□□ -1.65
BRF1Q92994 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC4.73□□□□□ -1.65
BRF1Q92994 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
BRF1Q92994 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
BRF1Q92994 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
BRF1Q92994 AC007823.1-201ENST00000569932 1566 ntBASIC4.73□□□□□ -1.65
BRF1Q92994 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC4.73□□□□□ -1.65
BRF1Q92994 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC4.72□□□□□ -1.65
BRF1Q92994 ZNF519P1-201ENST00000449011 1626 ntBASIC4.72□□□□□ -1.65
BRF1Q92994 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC4.72□□□□□ -1.65
BRF1Q92994 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
BRF1Q92994 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
BRF1Q92994 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
BRF1Q92994 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
BRF1Q92994 ZBTB8OSP1-201ENST00000342688 498 ntBASIC4.72□□□□□ -1.65
BRF1Q92994 RNU6-1249P-201ENST00000363237 111 ntBASIC4.72□□□□□ -1.65
BRF1Q92994 Y_RNA.112-201ENST00000363250 102 ntBASIC4.72□□□□□ -1.65
BRF1Q92994 RNU6-701P-201ENST00000384059 107 ntBASIC4.72□□□□□ -1.65
BRF1Q92994 RNU6-356P-201ENST00000384140 107 ntBASIC4.72□□□□□ -1.65
BRF1Q92994 NDUFS5P1-201ENST00000405668 289 ntBASIC4.72□□□□□ -1.65
BRF1Q92994 RNU4-78P-201ENST00000410940 126 ntBASIC4.72□□□□□ -1.65
BRF1Q92994 EIF4A1P3-201ENST00000411521 244 ntBASIC4.72□□□□□ -1.65
BRF1Q92994 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC4.72□□□□□ -1.65
BRF1Q92994 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC4.72□□□□□ -1.65
BRF1Q92994 SNAP23P1-201ENST00000433229 246 ntBASIC4.72□□□□□ -1.65
BRF1Q92994 AC090774.1-201ENST00000435925 246 ntBASIC4.72□□□□□ -1.65
BRF1Q92994 TBCAP1-201ENST00000436520 327 ntBASIC4.72□□□□□ -1.65
BRF1Q92994 H2AFZP6-201ENST00000444403 394 ntBASIC4.72□□□□□ -1.65
BRF1Q92994 AL162388.1-201ENST00000450912 352 ntBASIC4.72□□□□□ -1.65
BRF1Q92994 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC4.72□□□□□ -1.65
BRF1Q92994 DYNLL1P5-201ENST00000467158 270 ntBASIC4.72□□□□□ -1.65
BRF1Q92994 AC106872.2-201ENST00000494303 480 ntBASIC4.72□□□□□ -1.65
BRF1Q92994 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC4.72□□□□□ -1.65
BRF1Q92994 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC4.72□□□□□ -1.65
BRF1Q92994 MTCYBP40-201ENST00000509390 1135 ntBASIC4.72□□□□□ -1.65
BRF1Q92994 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC4.72□□□□□ -1.65
BRF1Q92994 RN7SKP122-201ENST00000515923 296 ntBASIC4.72□□□□□ -1.65
BRF1Q92994 RNU6-123P-201ENST00000516163 102 ntBASIC4.72□□□□□ -1.65
BRF1Q92994 RNU4ATAC6P-201ENST00000516592 126 ntBASIC4.72□□□□□ -1.65
BRF1Q92994 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC4.72□□□□□ -1.65
BRF1Q92994 AP006587.4-201ENST00000526053 529 ntBASIC4.72□□□□□ -1.65
BRF1Q92994 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC4.72□□□□□ -1.65
BRF1Q92994 AC106782.4-201ENST00000568264 210 ntBASIC4.72□□□□□ -1.65
BRF1Q92994 RPL23AP84-201ENST00000571193 464 ntBASIC4.72□□□□□ -1.65
BRF1Q92994 MIR3941-201ENST00000582572 103 ntBASIC4.72□□□□□ -1.65
BRF1Q92994 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC4.72□□□□□ -1.65
BRF1Q92994 IGHV3-29-201ENST00000604817 344 ntBASIC4.72□□□□□ -1.65
BRF1Q92994 U2.17-201ENST00000611454 95 ntBASIC4.72□□□□□ -1.65
BRF1Q92994 DUSP12P1-201ENST00000612874 516 ntBASIC4.72□□□□□ -1.65
BRF1Q92994 MIR6716-201ENST00000613413 80 ntBASIC4.72□□□□□ -1.65
BRF1Q92994 STK31-205ENST00000433467 3085 ntTSL 2 BASIC4.71□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 100.8 ms