Protein–RNA interactions for Protein: Q92902

HPS1, Hermansky-Pudlak syndrome 1 protein, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1Q92902 AC010127.1-209ENST00000447809 2305 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
HPS1Q92902 GYS2-201ENST00000261195 3132 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.57
HPS1Q92902 KCNT2-203ENST00000451324 3146 ntTSL 1 (best) BASIC5.21□□□□□ -1.57
HPS1Q92902 AP3B1-204ENST00000519295 3986 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
HPS1Q92902 NCAPGP1-201ENST00000505112 1814 ntBASIC5.21□□□□□ -1.58
HPS1Q92902 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
HPS1Q92902 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
HPS1Q92902 ARHGAP5-210ENST00000556611 4824 ntAPPRIS ALT1 TSL 5 BASIC5.21□□□□□ -1.58
HPS1Q92902 IL1RL1-201ENST00000233954 2058 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
HPS1Q92902 SNORD14B-201ENST00000364533 90 ntBASIC5.21□□□□□ -1.58
HPS1Q92902 OR1L6-202ENST00000373684 1044 ntBASIC5.21□□□□□ -1.58
HPS1Q92902 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
HPS1Q92902 MIR153-2-201ENST00000385225 87 ntBASIC5.21□□□□□ -1.58
HPS1Q92902 TRAJ38-201ENST00000390499 62 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
HPS1Q92902 BTF3L4P2-201ENST00000392798 346 ntBASIC5.21□□□□□ -1.58
HPS1Q92902 UBA52P6-201ENST00000399822 382 ntBASIC5.21□□□□□ -1.58
HPS1Q92902 GAS5-208ENST00000425771 242 ntTSL 3 BASIC5.21□□□□□ -1.58
HPS1Q92902 TSSK4-203ENST00000428351 576 ntTSL 2 BASIC5.21□□□□□ -1.58
HPS1Q92902 AC092811.1-201ENST00000428642 397 ntTSL 3 BASIC5.21□□□□□ -1.58
HPS1Q92902 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC5.21□□□□□ -1.58
HPS1Q92902 CYCSP12-201ENST00000437729 300 ntBASIC5.21□□□□□ -1.58
HPS1Q92902 RPS20P10-201ENST00000451209 253 ntBASIC5.21□□□□□ -1.58
HPS1Q92902 MTATP6P7-201ENST00000453315 681 ntBASIC5.21□□□□□ -1.58
HPS1Q92902 AL354710.1-201ENST00000453641 246 ntBASIC5.21□□□□□ -1.58
HPS1Q92902 FRG2FP-204ENST00000453982 852 ntBASIC5.21□□□□□ -1.58
HPS1Q92902 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC5.21□□□□□ -1.58
HPS1Q92902 RNU7-107P-201ENST00000459121 61 ntBASIC5.21□□□□□ -1.58
HPS1Q92902 RN7SL352P-201ENST00000466002 277 ntBASIC5.21□□□□□ -1.58
HPS1Q92902 SNRPCP2-201ENST00000504370 475 ntBASIC5.21□□□□□ -1.58
HPS1Q92902 HIGD1AP3-201ENST00000515857 278 ntBASIC5.21□□□□□ -1.58
HPS1Q92902 RNU6-927P-201ENST00000516199 100 ntBASIC5.21□□□□□ -1.58
HPS1Q92902 AC040970.1-202ENST00000517908 505 ntTSL 3 BASIC5.21□□□□□ -1.58
HPS1Q92902 AC090049.2-201ENST00000550377 109 ntBASIC5.21□□□□□ -1.58
HPS1Q92902 OTX2-203ENST00000554559 715 ntTSL 5 BASIC5.21□□□□□ -1.58
HPS1Q92902 AC011476.3-202ENST00000586845 553 ntTSL 3 BASIC5.21□□□□□ -1.58
HPS1Q92902 AC012313.4-201ENST00000596296 495 ntTSL 3 BASIC5.21□□□□□ -1.58
HPS1Q92902 AC005176.2-201ENST00000596933 147 ntBASIC5.21□□□□□ -1.58
HPS1Q92902 AC234771.5-201ENST00000600161 514 ntBASIC5.21□□□□□ -1.58
HPS1Q92902 CCL23-201ENST00000612516 569 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.58
HPS1Q92902 RGPD1-206ENST00000641458 5271 ntAPPRIS ALT2 BASIC5.21□□□□□ -1.58
HPS1Q92902 ZNF230-201ENST00000429154 4115 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
HPS1Q92902 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
HPS1Q92902 SLC1A3-202ENST00000381918 3652 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
HPS1Q92902 PIP5K1B-201ENST00000265382 2654 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
HPS1Q92902 SEM1-202ENST00000356686 2667 ntTSL 5 BASIC5.2□□□□□ -1.58
HPS1Q92902 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC5.2□□□□□ -1.58
HPS1Q92902 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC5.2□□□□□ -1.58
HPS1Q92902 TSPAN6-204ENST00000612152 3796 ntTSL 5 BASIC5.2□□□□□ -1.58
HPS1Q92902 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
HPS1Q92902 SNORA21-201ENST00000362423 132 ntBASIC5.2□□□□□ -1.58
HPS1Q92902 RNU4-80P-201ENST00000363200 141 ntBASIC5.2□□□□□ -1.58
HPS1Q92902 RNU6-1155P-201ENST00000363554 107 ntBASIC5.2□□□□□ -1.58
HPS1Q92902 MIR32-201ENST00000384965 70 ntBASIC5.2□□□□□ -1.58
HPS1Q92902 MT-TC-201ENST00000387405 66 ntBASIC5.2□□□□□ -1.58
HPS1Q92902 RNU6-381P-201ENST00000391259 108 ntBASIC5.2□□□□□ -1.58
HPS1Q92902 RPL21P67-201ENST00000402896 478 ntBASIC5.2□□□□□ -1.58
HPS1Q92902 AC245096.1-201ENST00000413104 546 ntBASIC5.2□□□□□ -1.58
HPS1Q92902 RPL35AP31-201ENST00000418340 337 ntBASIC5.2□□□□□ -1.58
HPS1Q92902 RPL12P12-201ENST00000424633 501 ntBASIC5.2□□□□□ -1.58
HPS1Q92902 AL138785.1-201ENST00000425821 331 ntBASIC5.2□□□□□ -1.58
HPS1Q92902 BTF3P11-201ENST00000426582 477 ntBASIC5.2□□□□□ -1.58
HPS1Q92902 AL353693.1-201ENST00000429567 442 ntTSL 3 BASIC5.2□□□□□ -1.58
HPS1Q92902 AC137630.2-202ENST00000429681 555 ntTSL 3 BASIC5.2□□□□□ -1.58
HPS1Q92902 Z82210.1-201ENST00000440037 231 ntBASIC5.2□□□□□ -1.58
HPS1Q92902 LARGE-IT1-201ENST00000445391 558 ntTSL 4 BASIC5.2□□□□□ -1.58
HPS1Q92902 AL161629.1-201ENST00000446201 457 ntTSL 3 BASIC5.2□□□□□ -1.58
HPS1Q92902 NXT1P1-201ENST00000458481 316 ntBASIC5.2□□□□□ -1.58
HPS1Q92902 AC087588.1-201ENST00000462203 316 ntBASIC5.2□□□□□ -1.58
HPS1Q92902 RPL21P13-201ENST00000488305 481 ntBASIC5.2□□□□□ -1.58
HPS1Q92902 RNA5SP271-201ENST00000516700 88 ntBASIC5.2□□□□□ -1.58
HPS1Q92902 IGKV1OR22-1-201ENST00000521497 360 ntBASIC5.2□□□□□ -1.58
HPS1Q92902 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC5.2□□□□□ -1.58
HPS1Q92902 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC5.2□□□□□ -1.58
HPS1Q92902 AL391261.3-201ENST00000557194 520 ntBASIC5.2□□□□□ -1.58
HPS1Q92902 AC026620.1-201ENST00000584815 326 ntTSL 3 BASIC5.2□□□□□ -1.58
HPS1Q92902 AP001340.1-201ENST00000624405 217 ntBASIC5.2□□□□□ -1.58
HPS1Q92902 AC073869.8-201ENST00000641806 335 ntBASIC5.2□□□□□ -1.58
HPS1Q92902 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC5.2□□□□□ -1.58
HPS1Q92902 AL590399.5-201ENST00000428709 3325 ntTSL 2 BASIC5.2□□□□□ -1.58
HPS1Q92902 ZNF682-201ENST00000358523 2161 ntTSL 2 BASIC5.2□□□□□ -1.58
HPS1Q92902 MYB-239ENST00000534121 2238 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
HPS1Q92902 VWC2L-202ENST00000427124 4480 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
HPS1Q92902 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
HPS1Q92902 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC5.2□□□□□ -1.58
HPS1Q92902 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC5.19□□□□□ -1.58
HPS1Q92902 CLDND1-208ENST00000503004 2818 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
HPS1Q92902 BLZF1-203ENST00000367808 2749 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
HPS1Q92902 OR4E1-202ENST00000641792 3742 ntAPPRIS P5 BASIC5.19□□□□□ -1.58
HPS1Q92902 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
HPS1Q92902 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC5.19□□□□□ -1.58
HPS1Q92902 Y_RNA.337-201ENST00000365312 102 ntBASIC5.19□□□□□ -1.58
HPS1Q92902 TRGV5-201ENST00000390344 552 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
HPS1Q92902 RNU6-578P-201ENST00000390980 103 ntBASIC5.19□□□□□ -1.58
HPS1Q92902 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC5.19□□□□□ -1.58
HPS1Q92902 RNU2-43P-201ENST00000410306 190 ntBASIC5.19□□□□□ -1.58
HPS1Q92902 RNU6-1025P-201ENST00000410629 104 ntBASIC5.19□□□□□ -1.58
HPS1Q92902 RPS3P2-201ENST00000421346 701 ntBASIC5.19□□□□□ -1.58
HPS1Q92902 AL158156.1-201ENST00000422509 473 ntBASIC5.19□□□□□ -1.58
HPS1Q92902 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC5.19□□□□□ -1.58
HPS1Q92902 MRPL48P1-201ENST00000445390 636 ntBASIC5.19□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 100.2 ms