Protein–RNA interactions for Protein: Q92889

ERCC4, DNA repair endonuclease XPF, humanhuman

Predicted RBP Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4Q92889 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC4.43□□□□□ -1.7
ERCC4Q92889 GAS5-208ENST00000425771 242 ntTSL 3 BASIC4.43□□□□□ -1.7
ERCC4Q92889 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC4.43□□□□□ -1.7
ERCC4Q92889 AC234775.1-201ENST00000454247 670 ntBASIC4.43□□□□□ -1.7
ERCC4Q92889 SNRPFP3-201ENST00000457792 225 ntBASIC4.43□□□□□ -1.7
ERCC4Q92889 AC008481.1-201ENST00000463278 396 ntBASIC4.43□□□□□ -1.7
ERCC4Q92889 RPL23AP62-201ENST00000463396 453 ntBASIC4.43□□□□□ -1.7
ERCC4Q92889 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC4.43□□□□□ -1.7
ERCC4Q92889 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
ERCC4Q92889 Vault.1-201ENST00000516474 102 ntBASIC4.43□□□□□ -1.7
ERCC4Q92889 AC109635.4-202ENST00000531666 412 ntBASIC4.43□□□□□ -1.7
ERCC4Q92889 AL137161.1-201ENST00000532231 390 ntBASIC4.43□□□□□ -1.7
ERCC4Q92889 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC4.43□□□□□ -1.7
ERCC4Q92889 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC4.43□□□□□ -1.7
ERCC4Q92889 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC4.43□□□□□ -1.7
ERCC4Q92889 AC007687.1-201ENST00000602704 304 ntBASIC4.43□□□□□ -1.7
ERCC4Q92889 AL022099.1-201ENST00000604551 712 ntBASIC4.43□□□□□ -1.7
ERCC4Q92889 IGHV3-29-201ENST00000604817 344 ntBASIC4.43□□□□□ -1.7
ERCC4Q92889 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC4.43□□□□□ -1.7
ERCC4Q92889 AC068831.8-201ENST00000620171 435 ntBASIC4.43□□□□□ -1.7
ERCC4Q92889 AC243312.2-201ENST00000623340 601 ntBASIC4.43□□□□□ -1.7
ERCC4Q92889 AC244205.2-202ENST00000635781 342 ntBASIC4.43□□□□□ -1.7
ERCC4Q92889 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
ERCC4Q92889 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC4.43□□□□□ -1.7
ERCC4Q92889 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC4.43□□□□□ -1.7
ERCC4Q92889 AC121333.1-201ENST00000567488 2709 ntBASIC4.42□□□□□ -1.7
ERCC4Q92889 AC010733.2-201ENST00000589496 5702 ntBASIC4.42□□□□□ -1.7
ERCC4Q92889 RNU6-1249P-201ENST00000363237 111 ntBASIC4.42□□□□□ -1.7
ERCC4Q92889 RNA5SP130-201ENST00000364431 114 ntBASIC4.42□□□□□ -1.7
ERCC4Q92889 SMIM11P1-201ENST00000369586 178 ntBASIC4.42□□□□□ -1.7
ERCC4Q92889 Y_RNA.394-201ENST00000383942 103 ntBASIC4.42□□□□□ -1.7
ERCC4Q92889 MIR1302-11-201ENST00000408051 138 ntBASIC4.42□□□□□ -1.7
ERCC4Q92889 MIR1302-9-201ENST00000408365 138 ntBASIC4.42□□□□□ -1.7
ERCC4Q92889 MIR1251-201ENST00000408552 70 ntBASIC4.42□□□□□ -1.7
ERCC4Q92889 MIR1302-10-201ENST00000408734 138 ntBASIC4.42□□□□□ -1.7
ERCC4Q92889 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC4.42□□□□□ -1.7
ERCC4Q92889 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC4.42□□□□□ -1.7
ERCC4Q92889 AC092017.2-201ENST00000427600 362 ntBASIC4.42□□□□□ -1.7
ERCC4Q92889 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC4.42□□□□□ -1.7
ERCC4Q92889 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC4.42□□□□□ -1.7
ERCC4Q92889 HMGB1P37-201ENST00000439613 609 ntBASIC4.42□□□□□ -1.7
ERCC4Q92889 MTCYBP6-201ENST00000441810 138 ntBASIC4.42□□□□□ -1.7
ERCC4Q92889 AL162151.2-201ENST00000448875 158 ntBASIC4.42□□□□□ -1.7
ERCC4Q92889 RNU6-1208P-201ENST00000459588 107 ntBASIC4.42□□□□□ -1.7
ERCC4Q92889 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC4.42□□□□□ -1.7
ERCC4Q92889 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC4.42□□□□□ -1.7
ERCC4Q92889 AC068587.1-201ENST00000483613 781 ntBASIC4.42□□□□□ -1.7
ERCC4Q92889 RN7SL432P-201ENST00000484057 298 ntBASIC4.42□□□□□ -1.7
ERCC4Q92889 AC117522.3-201ENST00000507974 584 ntBASIC4.42□□□□□ -1.7
ERCC4Q92889 RNU6-685P-201ENST00000517088 95 ntBASIC4.42□□□□□ -1.7
ERCC4Q92889 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC4.42□□□□□ -1.7
ERCC4Q92889 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC4.42□□□□□ -1.7
ERCC4Q92889 AL442663.2-201ENST00000554385 511 ntBASIC4.42□□□□□ -1.7
ERCC4Q92889 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC4.42□□□□□ -1.7
ERCC4Q92889 AC026464.5-201ENST00000562497 722 ntBASIC4.42□□□□□ -1.7
ERCC4Q92889 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC4.42□□□□□ -1.7
ERCC4Q92889 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC4.42□□□□□ -1.7
ERCC4Q92889 AL670379.6-201ENST00000603753 252 ntBASIC4.42□□□□□ -1.7
ERCC4Q92889 AL670379.11-201ENST00000604059 253 ntBASIC4.42□□□□□ -1.7
ERCC4Q92889 AC008162.1-201ENST00000604718 254 ntBASIC4.42□□□□□ -1.7
ERCC4Q92889 AL670379.1-201ENST00000604752 252 ntBASIC4.42□□□□□ -1.7
ERCC4Q92889 AL670379.5-201ENST00000605253 252 ntBASIC4.42□□□□□ -1.7
ERCC4Q92889 AL670379.12-201ENST00000605291 253 ntBASIC4.42□□□□□ -1.7
ERCC4Q92889 AL670379.8-201ENST00000605353 252 ntBASIC4.42□□□□□ -1.7
ERCC4Q92889 BRDTP1-201ENST00000605735 677 ntBASIC4.42□□□□□ -1.7
ERCC4Q92889 AL670379.7-201ENST00000605823 252 ntBASIC4.42□□□□□ -1.7
ERCC4Q92889 MIR1302-2-201ENST00000607096 138 ntBASIC4.42□□□□□ -1.7
ERCC4Q92889 AL022345.1-201ENST00000607292 135 ntBASIC4.42□□□□□ -1.7
ERCC4Q92889 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC4.42□□□□□ -1.7
ERCC4Q92889 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC4.42□□□□□ -1.7
ERCC4Q92889 uc_338.34-201ENST00000617467 174 ntBASIC4.42□□□□□ -1.7
ERCC4Q92889 AL445567.2-201ENST00000618935 498 ntBASIC4.42□□□□□ -1.7
ERCC4Q92889 U7.8-201ENST00000619968 63 ntBASIC4.42□□□□□ -1.7
ERCC4Q92889 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC4.42□□□□□ -1.7
ERCC4Q92889 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC4.42□□□□□ -1.7
ERCC4Q92889 U6.114-201ENST00000636407 96 ntBASIC4.42□□□□□ -1.7
ERCC4Q92889 OR52H1-202ENST00000641796 1061 ntBASIC4.42□□□□□ -1.7
ERCC4Q92889 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC4.42□□□□□ -1.7
ERCC4Q92889 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
ERCC4Q92889 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
ERCC4Q92889 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
ERCC4Q92889 USP8P1-201ENST00000494673 3183 ntBASIC4.42□□□□□ -1.7
ERCC4Q92889 API5P2-201ENST00000397055 1498 ntBASIC4.42□□□□□ -1.7
ERCC4Q92889 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
ERCC4Q92889 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
ERCC4Q92889 TNPO1P3-201ENST00000436471 2662 ntBASIC4.41□□□□□ -1.7
ERCC4Q92889 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC4.41□□□□□ -1.7
ERCC4Q92889 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC4.41□□□□□ -1.7
ERCC4Q92889 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC4.41□□□□□ -1.7
ERCC4Q92889 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
ERCC4Q92889 Y_RNA.67-201ENST00000362870 100 ntBASIC4.41□□□□□ -1.7
ERCC4Q92889 Y_RNA.301-201ENST00000364990 103 ntBASIC4.41□□□□□ -1.7
ERCC4Q92889 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC4.41□□□□□ -1.7
ERCC4Q92889 Y_RNA.530-201ENST00000384587 101 ntBASIC4.41□□□□□ -1.7
ERCC4Q92889 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
ERCC4Q92889 AL356967.1-201ENST00000406305 431 ntBASIC4.41□□□□□ -1.7
ERCC4Q92889 AL583834.1-201ENST00000406943 343 ntBASIC4.41□□□□□ -1.7
ERCC4Q92889 RNU6-387P-201ENST00000411331 105 ntBASIC4.41□□□□□ -1.7
ERCC4Q92889 NAP1L1P2-201ENST00000414182 1089 ntBASIC4.41□□□□□ -1.7
ERCC4Q92889 AL451054.2-201ENST00000420896 202 ntBASIC4.41□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 81.5 ms