Protein–RNA interactions for Protein: Q92617

NPIPB3, Nuclear pore complex-interacting protein family member B3, humanhuman

Predictions only

Length 1,050 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3Q92617 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
NPIPB3Q92617 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC3.33□□□□□ -1.88
NPIPB3Q92617 DAZ4-207ENST00000634662 1832 ntAPPRIS ALT2 TSL 5 BASIC3.33□□□□□ -1.88
NPIPB3Q92617 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC3.33□□□□□ -1.88
NPIPB3Q92617 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
NPIPB3Q92617 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC3.33□□□□□ -1.88
NPIPB3Q92617 MNS1-201ENST00000260453 2023 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
NPIPB3Q92617 OR5P1P-201ENST00000299512 925 ntBASIC3.33□□□□□ -1.88
NPIPB3Q92617 SYF2-202ENST00000354361 926 ntTSL 2 BASIC3.33□□□□□ -1.88
NPIPB3Q92617 Y_RNA.167-201ENST00000363735 109 ntBASIC3.33□□□□□ -1.88
NPIPB3Q92617 RNU6-1179P-201ENST00000384667 107 ntBASIC3.33□□□□□ -1.88
NPIPB3Q92617 RPL21P17-201ENST00000397467 475 ntBASIC3.33□□□□□ -1.88
NPIPB3Q92617 SNORA11F-201ENST00000408237 128 ntBASIC3.33□□□□□ -1.88
NPIPB3Q92617 MIR1179-201ENST00000408703 91 ntBASIC3.33□□□□□ -1.88
NPIPB3Q92617 RN7SKP32-201ENST00000410167 303 ntBASIC3.33□□□□□ -1.88
NPIPB3Q92617 RNU6-1148P-201ENST00000410992 104 ntBASIC3.33□□□□□ -1.88
NPIPB3Q92617 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC3.33□□□□□ -1.88
NPIPB3Q92617 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC3.33□□□□□ -1.88
NPIPB3Q92617 ACTR3BP6-201ENST00000422332 1241 ntBASIC3.33□□□□□ -1.88
NPIPB3Q92617 AC011998.1-201ENST00000433403 117 ntBASIC3.33□□□□□ -1.88
NPIPB3Q92617 ST7-AS2-203ENST00000434993 918 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
NPIPB3Q92617 IFNA20P-201ENST00000436840 528 ntBASIC3.33□□□□□ -1.88
NPIPB3Q92617 AP001432.1-201ENST00000440629 520 ntTSL 2 BASIC3.33□□□□□ -1.88
NPIPB3Q92617 AL671855.1-201ENST00000446875 1203 ntBASIC3.33□□□□□ -1.88
NPIPB3Q92617 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC3.33□□□□□ -1.88
NPIPB3Q92617 RPS29P19-201ENST00000479709 171 ntBASIC3.33□□□□□ -1.88
NPIPB3Q92617 AP002812.1-201ENST00000495378 474 ntBASIC3.33□□□□□ -1.88
NPIPB3Q92617 TRBVA-201ENST00000498804 316 ntBASIC3.33□□□□□ -1.88
NPIPB3Q92617 AC025554.1-201ENST00000505641 188 ntBASIC3.33□□□□□ -1.88
NPIPB3Q92617 NDUFB4P9-201ENST00000511646 388 ntBASIC3.33□□□□□ -1.88
NPIPB3Q92617 AC112206.3-201ENST00000514578 389 ntBASIC3.33□□□□□ -1.88
NPIPB3Q92617 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC3.33□□□□□ -1.88
NPIPB3Q92617 AC011602.1-201ENST00000546484 331 ntBASIC3.33□□□□□ -1.88
NPIPB3Q92617 AC063950.1-201ENST00000552036 308 ntBASIC3.33□□□□□ -1.88
NPIPB3Q92617 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC3.33□□□□□ -1.88
NPIPB3Q92617 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC3.33□□□□□ -1.88
NPIPB3Q92617 AC073539.2-201ENST00000597113 165 ntBASIC3.33□□□□□ -1.88
NPIPB3Q92617 LARP7P1-201ENST00000605576 316 ntBASIC3.33□□□□□ -1.88
NPIPB3Q92617 AC009994.1-201ENST00000606889 253 ntBASIC3.33□□□□□ -1.88
NPIPB3Q92617 FTX_3.1-201ENST00000610451 147 ntBASIC3.33□□□□□ -1.88
NPIPB3Q92617 AC064801.1-201ENST00000612025 407 ntBASIC3.33□□□□□ -1.88
NPIPB3Q92617 uc_338.13-201ENST00000618243 179 ntBASIC3.33□□□□□ -1.88
NPIPB3Q92617 Z82217.1-201ENST00000625157 8149 ntBASIC3.33□□□□□ -1.88
NPIPB3Q92617 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
NPIPB3Q92617 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
NPIPB3Q92617 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
NPIPB3Q92617 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC3.33□□□□□ -1.88
NPIPB3Q92617 CUL3-216ENST00000617432 1426 ntTSL 5 BASIC3.33□□□□□ -1.88
NPIPB3Q92617 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC3.33□□□□□ -1.88
NPIPB3Q92617 AC007656.2-201ENST00000624902 4547 ntBASIC3.33□□□□□ -1.88
NPIPB3Q92617 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC3.33□□□□□ -1.88
NPIPB3Q92617 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC3.33□□□□□ -1.88
NPIPB3Q92617 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
NPIPB3Q92617 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC3.32□□□□□ -1.88
NPIPB3Q92617 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC3.32□□□□□ -1.88
NPIPB3Q92617 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC3.32□□□□□ -1.88
NPIPB3Q92617 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC3.32□□□□□ -1.88
NPIPB3Q92617 FTLP6-201ENST00000355274 422 ntBASIC3.32□□□□□ -1.88
NPIPB3Q92617 MIR412-201ENST00000362142 91 ntBASIC3.32□□□□□ -1.88
NPIPB3Q92617 SNORD113-7-201ENST00000363762 77 ntBASIC3.32□□□□□ -1.88
NPIPB3Q92617 Y_RNA.414-201ENST00000384011 101 ntBASIC3.32□□□□□ -1.88
NPIPB3Q92617 RNA5SP332-201ENST00000391063 115 ntBASIC3.32□□□□□ -1.88
NPIPB3Q92617 MTND3P8-201ENST00000412909 339 ntBASIC3.32□□□□□ -1.88
NPIPB3Q92617 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC3.32□□□□□ -1.88
NPIPB3Q92617 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC3.32□□□□□ -1.88
NPIPB3Q92617 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC3.32□□□□□ -1.88
NPIPB3Q92617 AL590762.4-201ENST00000425885 253 ntBASIC3.32□□□□□ -1.88
NPIPB3Q92617 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC3.32□□□□□ -1.88
NPIPB3Q92617 NDUFA5P4-201ENST00000436704 385 ntBASIC3.32□□□□□ -1.88
NPIPB3Q92617 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC3.32□□□□□ -1.88
NPIPB3Q92617 SNRPEP8-201ENST00000442866 260 ntBASIC3.32□□□□□ -1.88
NPIPB3Q92617 AC009487.1-201ENST00000444164 403 ntTSL 3 BASIC3.32□□□□□ -1.88
NPIPB3Q92617 AL451050.1-201ENST00000450126 415 ntBASIC3.32□□□□□ -1.88
NPIPB3Q92617 DCLRE1CP1-201ENST00000454630 470 ntBASIC3.32□□□□□ -1.88
NPIPB3Q92617 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC3.32□□□□□ -1.88
NPIPB3Q92617 RPL23AP81-201ENST00000455252 467 ntBASIC3.32□□□□□ -1.88
NPIPB3Q92617 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC3.32□□□□□ -1.88
NPIPB3Q92617 RPL32P34-201ENST00000486380 400 ntBASIC3.32□□□□□ -1.88
NPIPB3Q92617 AC022493.1-201ENST00000492984 337 ntBASIC3.32□□□□□ -1.88
NPIPB3Q92617 NDUFA5P12-201ENST00000503796 343 ntBASIC3.32□□□□□ -1.88
NPIPB3Q92617 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC3.32□□□□□ -1.88
NPIPB3Q92617 AC008638.1-201ENST00000506035 866 ntBASIC3.32□□□□□ -1.88
NPIPB3Q92617 AC006445.2-201ENST00000510061 472 ntBASIC3.32□□□□□ -1.88
NPIPB3Q92617 SNORA19.2-201ENST00000516013 114 ntBASIC3.32□□□□□ -1.88
NPIPB3Q92617 RNU4-49P-201ENST00000516080 140 ntBASIC3.32□□□□□ -1.88
NPIPB3Q92617 SNORA14.1-201ENST00000516113 141 ntBASIC3.32□□□□□ -1.88
NPIPB3Q92617 TRAPPC2P2-201ENST00000517589 409 ntBASIC3.32□□□□□ -1.88
NPIPB3Q92617 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC3.32□□□□□ -1.88
NPIPB3Q92617 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC3.32□□□□□ -1.88
NPIPB3Q92617 CYCSP27-201ENST00000527643 293 ntBASIC3.32□□□□□ -1.88
NPIPB3Q92617 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC3.32□□□□□ -1.88
NPIPB3Q92617 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC3.32□□□□□ -1.88
NPIPB3Q92617 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC3.32□□□□□ -1.88
NPIPB3Q92617 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC3.32□□□□□ -1.88
NPIPB3Q92617 AC005261.5-201ENST00000596280 355 ntBASIC3.32□□□□□ -1.88
NPIPB3Q92617 AC113403.1-201ENST00000604910 193 ntBASIC3.32□□□□□ -1.88
NPIPB3Q92617 ATP1B3P1-201ENST00000605365 821 ntBASIC3.32□□□□□ -1.88
NPIPB3Q92617 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
NPIPB3Q92617 MIR6719-201ENST00000622428 87 ntBASIC3.32□□□□□ -1.88
NPIPB3Q92617 AC091953.3-201ENST00000623220 236 ntBASIC3.32□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 115.9 ms