Protein–RNA interactions for Protein: Q92544

TM9SF4, Transmembrane 9 superfamily member 4, humanhuman

Predictions only

Length 642 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4Q92544 MIR5680-201ENST00000577577 84 ntBASIC3.18□□□□□ -1.9
TM9SF4Q92544 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC3.18□□□□□ -1.9
TM9SF4Q92544 MIR4276-201ENST00000584832 70 ntBASIC3.18□□□□□ -1.9
TM9SF4Q92544 AC011471.1-201ENST00000585766 187 ntBASIC3.18□□□□□ -1.9
TM9SF4Q92544 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC3.18□□□□□ -1.9
TM9SF4Q92544 IGHV3-29-201ENST00000604817 344 ntBASIC3.18□□□□□ -1.9
TM9SF4Q92544 STARD13-AS-239ENST00000609588 982 ntTSL 5 BASIC3.18□□□□□ -1.9
TM9SF4Q92544 AL161734.1-201ENST00000609720 557 ntBASIC3.18□□□□□ -1.9
TM9SF4Q92544 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC3.18□□□□□ -1.9
TM9SF4Q92544 WT1-AS_8.1-201ENST00000615200 275 ntBASIC3.18□□□□□ -1.9
TM9SF4Q92544 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC3.18□□□□□ -1.9
TM9SF4Q92544 AL138713.1-201ENST00000624026 2130 ntBASIC3.18□□□□□ -1.9
TM9SF4Q92544 SNORA50A-202ENST00000629536 136 ntBASIC3.18□□□□□ -1.9
TM9SF4Q92544 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC3.18□□□□□ -1.9
TM9SF4Q92544 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
TM9SF4Q92544 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC3.17□□□□□ -1.9
TM9SF4Q92544 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
TM9SF4Q92544 Y_RNA.159-201ENST00000363674 87 ntBASIC3.17□□□□□ -1.9
TM9SF4Q92544 RNU5A-8P-201ENST00000364102 114 ntBASIC3.17□□□□□ -1.9
TM9SF4Q92544 RNU4-12P-201ENST00000365233 139 ntBASIC3.17□□□□□ -1.9
TM9SF4Q92544 RNU6-1103P-201ENST00000384150 107 ntBASIC3.17□□□□□ -1.9
TM9SF4Q92544 BTF3P7-201ENST00000407097 488 ntBASIC3.17□□□□□ -1.9
TM9SF4Q92544 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC3.17□□□□□ -1.9
TM9SF4Q92544 DBIP2-201ENST00000419076 262 ntBASIC3.17□□□□□ -1.9
TM9SF4Q92544 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC3.17□□□□□ -1.9
TM9SF4Q92544 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC3.17□□□□□ -1.9
TM9SF4Q92544 USP9YP18-201ENST00000425912 695 ntBASIC3.17□□□□□ -1.9
TM9SF4Q92544 AC005300.1-201ENST00000428401 373 ntBASIC3.17□□□□□ -1.9
TM9SF4Q92544 AC073464.1-201ENST00000429823 534 ntBASIC3.17□□□□□ -1.9
TM9SF4Q92544 VDAC1P3-201ENST00000434069 851 ntBASIC3.17□□□□□ -1.9
TM9SF4Q92544 USP9YP15-201ENST00000442391 422 ntBASIC3.17□□□□□ -1.9
TM9SF4Q92544 AC132479.1-201ENST00000449160 144 ntBASIC3.17□□□□□ -1.9
TM9SF4Q92544 PSPHP1-201ENST00000450062 261 ntBASIC3.17□□□□□ -1.9
TM9SF4Q92544 MTND1P12-201ENST00000455231 147 ntBASIC3.17□□□□□ -1.9
TM9SF4Q92544 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC3.17□□□□□ -1.9
TM9SF4Q92544 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC3.17□□□□□ -1.9
TM9SF4Q92544 HMGN2P16-201ENST00000456802 261 ntBASIC3.17□□□□□ -1.9
TM9SF4Q92544 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC3.17□□□□□ -1.9
TM9SF4Q92544 ST13P14-201ENST00000474095 734 ntBASIC3.17□□□□□ -1.9
TM9SF4Q92544 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC3.17□□□□□ -1.9
TM9SF4Q92544 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC3.17□□□□□ -1.9
TM9SF4Q92544 SETP2-201ENST00000553886 926 ntBASIC3.17□□□□□ -1.9
TM9SF4Q92544 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC3.17□□□□□ -1.9
TM9SF4Q92544 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC3.17□□□□□ -1.9
TM9SF4Q92544 AC012493.2-201ENST00000595083 291 ntBASIC3.17□□□□□ -1.9
TM9SF4Q92544 AC011451.2-201ENST00000604303 598 ntBASIC3.17□□□□□ -1.9
TM9SF4Q92544 YPEL5P2-201ENST00000605553 359 ntBASIC3.17□□□□□ -1.9
TM9SF4Q92544 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC3.17□□□□□ -1.9
TM9SF4Q92544 U73479.1-201ENST00000618062 168 ntBASIC3.17□□□□□ -1.9
TM9SF4Q92544 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
TM9SF4Q92544 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC3.17□□□□□ -1.9
TM9SF4Q92544 AL645937.1-201ENST00000641739 1652 ntBASIC3.17□□□□□ -1.9
TM9SF4Q92544 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.17□□□□□ -1.9
TM9SF4Q92544 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC3.16□□□□□ -1.9
TM9SF4Q92544 Y_RNA.1-201ENST00000352915 104 ntBASIC3.16□□□□□ -1.9
TM9SF4Q92544 RNU6-1090P-201ENST00000364065 94 ntBASIC3.16□□□□□ -1.9
TM9SF4Q92544 RNU6-1078P-201ENST00000364522 103 ntBASIC3.16□□□□□ -1.9
TM9SF4Q92544 RNU6-169P-201ENST00000365336 107 ntBASIC3.16□□□□□ -1.9
TM9SF4Q92544 RNY3P13-201ENST00000365542 102 ntBASIC3.16□□□□□ -1.9
TM9SF4Q92544 RNU6-805P-201ENST00000365643 106 ntBASIC3.16□□□□□ -1.9
TM9SF4Q92544 SNORA20.2-201ENST00000383922 131 ntBASIC3.16□□□□□ -1.9
TM9SF4Q92544 MIR135A2-201ENST00000384854 100 ntBASIC3.16□□□□□ -1.9
TM9SF4Q92544 RNA5SP107-201ENST00000411358 122 ntBASIC3.16□□□□□ -1.9
TM9SF4Q92544 RNU2-71P-201ENST00000411395 189 ntBASIC3.16□□□□□ -1.9
TM9SF4Q92544 SSXP9-201ENST00000417503 292 ntBASIC3.16□□□□□ -1.9
TM9SF4Q92544 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC3.16□□□□□ -1.9
TM9SF4Q92544 AL353193.1-201ENST00000421444 268 ntBASIC3.16□□□□□ -1.9
TM9SF4Q92544 AL353678.1-201ENST00000422735 741 ntBASIC3.16□□□□□ -1.9
TM9SF4Q92544 TRIM60P10Y-201ENST00000425589 751 ntBASIC3.16□□□□□ -1.9
TM9SF4Q92544 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC3.16□□□□□ -1.9
TM9SF4Q92544 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC3.16□□□□□ -1.9
TM9SF4Q92544 FCF1P1-201ENST00000432690 571 ntBASIC3.16□□□□□ -1.9
TM9SF4Q92544 AC119618.1-201ENST00000434191 222 ntBASIC3.16□□□□□ -1.9
TM9SF4Q92544 TRIM60P8Y-201ENST00000436338 762 ntBASIC3.16□□□□□ -1.9
TM9SF4Q92544 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC3.16□□□□□ -1.9
TM9SF4Q92544 RPS15AP9-201ENST00000439856 381 ntBASIC3.16□□□□□ -1.9
TM9SF4Q92544 AL357552.1-201ENST00000445254 415 ntBASIC3.16□□□□□ -1.9
TM9SF4Q92544 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC3.16□□□□□ -1.9
TM9SF4Q92544 FGF7P6-202ENST00000451282 293 ntBASIC3.16□□□□□ -1.9
TM9SF4Q92544 MTCO3P38-201ENST00000468910 766 ntBASIC3.16□□□□□ -1.9
TM9SF4Q92544 AC009646.1-201ENST00000510455 318 ntBASIC3.16□□□□□ -1.9
TM9SF4Q92544 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC3.16□□□□□ -1.9
TM9SF4Q92544 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC3.16□□□□□ -1.9
TM9SF4Q92544 AP001893.2-201ENST00000526949 202 ntBASIC3.16□□□□□ -1.9
TM9SF4Q92544 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
TM9SF4Q92544 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC3.16□□□□□ -1.9
TM9SF4Q92544 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC3.16□□□□□ -1.9
TM9SF4Q92544 TRAV37-201ENST00000553906 342 ntBASIC3.16□□□□□ -1.9
TM9SF4Q92544 AL133153.1-201ENST00000557756 303 ntBASIC3.16□□□□□ -1.9
TM9SF4Q92544 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC3.16□□□□□ -1.9
TM9SF4Q92544 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC3.16□□□□□ -1.9
TM9SF4Q92544 AC234778.2-201ENST00000566241 354 ntBASIC3.16□□□□□ -1.9
TM9SF4Q92544 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC3.16□□□□□ -1.9
TM9SF4Q92544 COX6CP3-201ENST00000580869 223 ntBASIC3.16□□□□□ -1.9
TM9SF4Q92544 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC3.16□□□□□ -1.9
TM9SF4Q92544 AL606834.2-201ENST00000602954 668 ntBASIC3.16□□□□□ -1.9
TM9SF4Q92544 XIAPP1-201ENST00000603162 600 ntBASIC3.16□□□□□ -1.9
TM9SF4Q92544 AL158211.4-201ENST00000606988 584 ntBASIC3.16□□□□□ -1.9
TM9SF4Q92544 AC007038.2-201ENST00000608095 740 ntBASIC3.16□□□□□ -1.9
TM9SF4Q92544 AC245517.5-201ENST00000611529 162 ntBASIC3.16□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 101 ms