Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
LMO3Q8TAP4 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
LMO3Q8TAP4 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
LMO3Q8TAP4 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
LMO3Q8TAP4 Z73965.1-201ENST00000623412 2297 ntBASIC3.39□□□□□ -1.87
LMO3Q8TAP4 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
LMO3Q8TAP4 MIR148B-201ENST00000362252 99 ntBASIC3.39□□□□□ -1.87
LMO3Q8TAP4 RNU6-845P-201ENST00000362578 103 ntBASIC3.39□□□□□ -1.87
LMO3Q8TAP4 RNU4-73P-201ENST00000363164 141 ntBASIC3.39□□□□□ -1.87
LMO3Q8TAP4 RNY4P16-201ENST00000364768 94 ntBASIC3.39□□□□□ -1.87
LMO3Q8TAP4 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC3.39□□□□□ -1.87
LMO3Q8TAP4 IARS-201ENST00000375627 697 ntTSL 3 BASIC3.39□□□□□ -1.87
LMO3Q8TAP4 RNU6-767P-201ENST00000384132 107 ntBASIC3.39□□□□□ -1.87
LMO3Q8TAP4 RNU6-74P-201ENST00000384235 107 ntBASIC3.39□□□□□ -1.87
LMO3Q8TAP4 RNVU1-14-201ENST00000384770 164 ntBASIC3.39□□□□□ -1.87
LMO3Q8TAP4 MIR670-201ENST00000390142 98 ntBASIC3.39□□□□□ -1.87
LMO3Q8TAP4 snosnR66.1-201ENST00000391095 99 ntBASIC3.39□□□□□ -1.87
LMO3Q8TAP4 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
LMO3Q8TAP4 RNA5SP120-201ENST00000410900 112 ntBASIC3.39□□□□□ -1.87
LMO3Q8TAP4 AC004987.3-201ENST00000413879 771 ntBASIC3.39□□□□□ -1.87
LMO3Q8TAP4 AC009302.1-201ENST00000417147 390 ntBASIC3.39□□□□□ -1.87
LMO3Q8TAP4 AC007283.2-201ENST00000424739 197 ntBASIC3.39□□□□□ -1.87
LMO3Q8TAP4 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC3.39□□□□□ -1.87
LMO3Q8TAP4 YME1L1P1-201ENST00000429435 297 ntBASIC3.39□□□□□ -1.87
LMO3Q8TAP4 AC108734.1-201ENST00000439549 399 ntBASIC3.39□□□□□ -1.87
LMO3Q8TAP4 AC016691.1-201ENST00000441321 413 ntBASIC3.39□□□□□ -1.87
LMO3Q8TAP4 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC3.39□□□□□ -1.87
LMO3Q8TAP4 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC3.39□□□□□ -1.87
LMO3Q8TAP4 HMGB3P8-201ENST00000449709 577 ntBASIC3.39□□□□□ -1.87
LMO3Q8TAP4 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC3.39□□□□□ -1.87
LMO3Q8TAP4 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC3.39□□□□□ -1.87
LMO3Q8TAP4 RN7SL809P-201ENST00000482040 297 ntBASIC3.39□□□□□ -1.87
LMO3Q8TAP4 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC3.39□□□□□ -1.87
LMO3Q8TAP4 NAF1-205ENST00000509434 385 ntTSL 3 BASIC3.39□□□□□ -1.87
LMO3Q8TAP4 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC3.39□□□□□ -1.87
LMO3Q8TAP4 RNU4ATAC10P-201ENST00000516967 122 ntBASIC3.39□□□□□ -1.87
LMO3Q8TAP4 RNA5SP337-201ENST00000517007 109 ntBASIC3.39□□□□□ -1.87
LMO3Q8TAP4 AC068657.1-201ENST00000520807 306 ntBASIC3.39□□□□□ -1.87
LMO3Q8TAP4 AP003497.1-201ENST00000528472 562 ntBASIC3.39□□□□□ -1.87
LMO3Q8TAP4 OR5B19P-201ENST00000531766 928 ntBASIC3.39□□□□□ -1.87
LMO3Q8TAP4 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC3.39□□□□□ -1.87
LMO3Q8TAP4 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
LMO3Q8TAP4 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC3.39□□□□□ -1.87
LMO3Q8TAP4 HMGB1P6-201ENST00000569046 646 ntBASIC3.39□□□□□ -1.87
LMO3Q8TAP4 AC090615.1-201ENST00000577519 154 ntBASIC3.39□□□□□ -1.87
LMO3Q8TAP4 AC007038.2-201ENST00000608095 740 ntBASIC3.39□□□□□ -1.87
LMO3Q8TAP4 OR6R2P-201ENST00000609216 300 ntBASIC3.39□□□□□ -1.87
LMO3Q8TAP4 AL591516.1-201ENST00000611326 274 ntBASIC3.39□□□□□ -1.87
LMO3Q8TAP4 AC135507.2-201ENST00000612443 309 ntBASIC3.39□□□□□ -1.87
LMO3Q8TAP4 DISC2.1-201ENST00000612827 205 ntBASIC3.39□□□□□ -1.87
LMO3Q8TAP4 AC024940.5-201ENST00000622889 474 ntBASIC3.39□□□□□ -1.87
LMO3Q8TAP4 MIR7153-201ENST00000637758 57 ntBASIC3.39□□□□□ -1.87
LMO3Q8TAP4 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC3.39□□□□□ -1.87
LMO3Q8TAP4 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
LMO3Q8TAP4 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
LMO3Q8TAP4 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC3.39□□□□□ -1.87
LMO3Q8TAP4 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
LMO3Q8TAP4 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
LMO3Q8TAP4 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
LMO3Q8TAP4 KCNRG-201ENST00000312942 1527 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
LMO3Q8TAP4 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
LMO3Q8TAP4 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC3.38□□□□□ -1.87
LMO3Q8TAP4 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC3.38□□□□□ -1.87
LMO3Q8TAP4 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.38□□□□□ -1.87
LMO3Q8TAP4 AC009902.3-201ENST00000606235 2172 ntBASIC3.38□□□□□ -1.87
LMO3Q8TAP4 AC011155.1-201ENST00000316512 456 ntBASIC3.38□□□□□ -1.87
LMO3Q8TAP4 Y_RNA.356-201ENST00000365475 113 ntBASIC3.38□□□□□ -1.87
LMO3Q8TAP4 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
LMO3Q8TAP4 RNU6-116P-201ENST00000384042 109 ntBASIC3.38□□□□□ -1.87
LMO3Q8TAP4 RNU6-178P-201ENST00000384631 104 ntBASIC3.38□□□□□ -1.87
LMO3Q8TAP4 Y_RNA.548-201ENST00000384656 105 ntBASIC3.38□□□□□ -1.87
LMO3Q8TAP4 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
LMO3Q8TAP4 RPL31P52-201ENST00000407532 367 ntBASIC3.38□□□□□ -1.87
LMO3Q8TAP4 RNU6-1068P-201ENST00000410958 103 ntBASIC3.38□□□□□ -1.87
LMO3Q8TAP4 RPS20P15-201ENST00000412792 311 ntBASIC3.38□□□□□ -1.87
LMO3Q8TAP4 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC3.38□□□□□ -1.87
LMO3Q8TAP4 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC3.38□□□□□ -1.87
LMO3Q8TAP4 RPL36AP53-201ENST00000432891 316 ntBASIC3.38□□□□□ -1.87
LMO3Q8TAP4 AC119618.1-201ENST00000434191 222 ntBASIC3.38□□□□□ -1.87
LMO3Q8TAP4 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC3.38□□□□□ -1.87
LMO3Q8TAP4 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC3.38□□□□□ -1.87
LMO3Q8TAP4 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC3.38□□□□□ -1.87
LMO3Q8TAP4 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC3.38□□□□□ -1.87
LMO3Q8TAP4 S100A11P1-201ENST00000477525 312 ntBASIC3.38□□□□□ -1.87
LMO3Q8TAP4 AC109925.1-201ENST00000478069 331 ntBASIC3.38□□□□□ -1.87
LMO3Q8TAP4 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC3.38□□□□□ -1.87
LMO3Q8TAP4 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC3.38□□□□□ -1.87
LMO3Q8TAP4 AC016065.2-201ENST00000514530 444 ntBASIC3.38□□□□□ -1.87
LMO3Q8TAP4 RNA5SP401-201ENST00000515920 127 ntBASIC3.38□□□□□ -1.87
LMO3Q8TAP4 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC3.38□□□□□ -1.87
LMO3Q8TAP4 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC3.38□□□□□ -1.87
LMO3Q8TAP4 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC3.38□□□□□ -1.87
LMO3Q8TAP4 OR5AL2P-201ENST00000532185 920 ntBASIC3.38□□□□□ -1.87
LMO3Q8TAP4 AC092470.1-201ENST00000546187 132 ntBASIC3.38□□□□□ -1.87
LMO3Q8TAP4 OR4T1P-201ENST00000554933 911 ntBASIC3.38□□□□□ -1.87
LMO3Q8TAP4 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
LMO3Q8TAP4 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC3.38□□□□□ -1.87
LMO3Q8TAP4 AC011712.1-201ENST00000588959 234 ntBASIC3.38□□□□□ -1.87
LMO3Q8TAP4 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC3.38□□□□□ -1.87
LMO3Q8TAP4 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC3.38□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 137 ms