Protein–RNA interactions for Protein: Q8NHS4

CLHC1, Clathrin heavy chain linker domain-containing protein 1, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1Q8NHS4 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC2.13□□□□□ -2.07
CLHC1Q8NHS4 AC022447.3-201ENST00000506865 495 ntBASIC2.13□□□□□ -2.07
CLHC1Q8NHS4 RPL23AP94-201ENST00000512518 302 ntBASIC2.13□□□□□ -2.07
CLHC1Q8NHS4 AC106895.1-201ENST00000515825 548 ntTSL 4 BASIC2.13□□□□□ -2.07
CLHC1Q8NHS4 RNA5SP281-201ENST00000516504 135 ntBASIC2.13□□□□□ -2.07
CLHC1Q8NHS4 RNU6-528P-201ENST00000516926 100 ntBASIC2.13□□□□□ -2.07
CLHC1Q8NHS4 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC2.13□□□□□ -2.07
CLHC1Q8NHS4 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC2.13□□□□□ -2.07
CLHC1Q8NHS4 LRRC37A5P-203ENST00000580181 585 ntBASIC2.13□□□□□ -2.07
CLHC1Q8NHS4 MIR4435-1-201ENST00000582552 80 ntBASIC2.13□□□□□ -2.07
CLHC1Q8NHS4 AP000403.1-201ENST00000603349 851 ntBASIC2.13□□□□□ -2.07
CLHC1Q8NHS4 FTX_3.1-201ENST00000610451 147 ntBASIC2.13□□□□□ -2.07
CLHC1Q8NHS4 AC008759.3-201ENST00000613300 508 ntBASIC2.13□□□□□ -2.07
CLHC1Q8NHS4 AC084824.4-201ENST00000620106 731 ntBASIC2.13□□□□□ -2.07
CLHC1Q8NHS4 AL162373.1-201ENST00000620433 407 ntBASIC2.13□□□□□ -2.07
CLHC1Q8NHS4 AC002550.2-201ENST00000621246 394 ntBASIC2.13□□□□□ -2.07
CLHC1Q8NHS4 AC025048.6-202ENST00000627667 438 ntBASIC2.13□□□□□ -2.07
CLHC1Q8NHS4 AC243829.7-201ENST00000633081 225 ntBASIC2.13□□□□□ -2.07
CLHC1Q8NHS4 UBE2Q2P1-202ENST00000354771 883 ntBASIC2.12□□□□□ -2.07
CLHC1Q8NHS4 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
CLHC1Q8NHS4 MIR218-1-201ENST00000384999 110 ntBASIC2.12□□□□□ -2.07
CLHC1Q8NHS4 MIR221-201ENST00000385135 110 ntBASIC2.12□□□□□ -2.07
CLHC1Q8NHS4 HMGB1P11-201ENST00000413899 637 ntBASIC2.12□□□□□ -2.07
CLHC1Q8NHS4 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC2.12□□□□□ -2.07
CLHC1Q8NHS4 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC2.12□□□□□ -2.07
CLHC1Q8NHS4 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC2.12□□□□□ -2.07
CLHC1Q8NHS4 MTCO2P5-201ENST00000422621 426 ntBASIC2.12□□□□□ -2.07
CLHC1Q8NHS4 MTCO1P3-201ENST00000429327 192 ntBASIC2.12□□□□□ -2.07
CLHC1Q8NHS4 AC007919.1-201ENST00000429380 217 ntBASIC2.12□□□□□ -2.07
CLHC1Q8NHS4 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC2.12□□□□□ -2.07
CLHC1Q8NHS4 SDCBPP1-201ENST00000440192 890 ntBASIC2.12□□□□□ -2.07
CLHC1Q8NHS4 MTND2P20-201ENST00000440805 661 ntBASIC2.12□□□□□ -2.07
CLHC1Q8NHS4 AL365204.2-201ENST00000446754 687 ntTSL 2 BASIC2.12□□□□□ -2.07
CLHC1Q8NHS4 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC2.12□□□□□ -2.07
CLHC1Q8NHS4 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC2.12□□□□□ -2.07
CLHC1Q8NHS4 AC104435.1-201ENST00000483483 166 ntBASIC2.12□□□□□ -2.07
CLHC1Q8NHS4 AC114981.1-201ENST00000503897 678 ntBASIC2.12□□□□□ -2.07
CLHC1Q8NHS4 AC093801.2-201ENST00000503966 1050 ntBASIC2.12□□□□□ -2.07
CLHC1Q8NHS4 MIR892C-201ENST00000516410 77 ntBASIC2.12□□□□□ -2.07
CLHC1Q8NHS4 AC022861.1-201ENST00000522981 663 ntBASIC2.12□□□□□ -2.07
CLHC1Q8NHS4 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC2.12□□□□□ -2.07
CLHC1Q8NHS4 AC087286.1-201ENST00000560712 568 ntTSL 3 BASIC2.12□□□□□ -2.07
CLHC1Q8NHS4 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC2.12□□□□□ -2.07
CLHC1Q8NHS4 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC2.12□□□□□ -2.07
CLHC1Q8NHS4 AC069304.2-201ENST00000605154 435 ntBASIC2.12□□□□□ -2.07
CLHC1Q8NHS4 AL356473.1-201ENST00000406203 1408 ntBASIC2.11□□□□□ -2.07
CLHC1Q8NHS4 AL109809.4-201ENST00000603520 2185 ntBASIC2.11□□□□□ -2.07
CLHC1Q8NHS4 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
CLHC1Q8NHS4 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
CLHC1Q8NHS4 RNA5SP125-201ENST00000364843 120 ntBASIC2.11□□□□□ -2.07
CLHC1Q8NHS4 RNA5SP37-201ENST00000365420 130 ntBASIC2.11□□□□□ -2.07
CLHC1Q8NHS4 RNU4-52P-201ENST00000384209 138 ntBASIC2.11□□□□□ -2.07
CLHC1Q8NHS4 SNORA67.4-201ENST00000384688 142 ntBASIC2.11□□□□□ -2.07
CLHC1Q8NHS4 DHFRP6-201ENST00000401776 268 ntBASIC2.11□□□□□ -2.07
CLHC1Q8NHS4 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC2.11□□□□□ -2.07
CLHC1Q8NHS4 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC2.11□□□□□ -2.07
CLHC1Q8NHS4 MED14P1-201ENST00000430517 648 ntBASIC2.11□□□□□ -2.07
CLHC1Q8NHS4 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC2.11□□□□□ -2.07
CLHC1Q8NHS4 UBE2FP3-201ENST00000436366 524 ntBASIC2.11□□□□□ -2.07
CLHC1Q8NHS4 GTF2IP7-202ENST00000436677 309 ntBASIC2.11□□□□□ -2.07
CLHC1Q8NHS4 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC2.11□□□□□ -2.07
CLHC1Q8NHS4 AC004383.1-201ENST00000438135 289 ntBASIC2.11□□□□□ -2.07
CLHC1Q8NHS4 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC2.11□□□□□ -2.07
CLHC1Q8NHS4 AC079776.3-201ENST00000450665 370 ntBASIC2.11□□□□□ -2.07
CLHC1Q8NHS4 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC2.11□□□□□ -2.07
CLHC1Q8NHS4 AC068781.1-201ENST00000488231 618 ntBASIC2.11□□□□□ -2.07
CLHC1Q8NHS4 AC079804.2-201ENST00000490376 200 ntBASIC2.11□□□□□ -2.07
CLHC1Q8NHS4 AC090255.1-201ENST00000495779 349 ntBASIC2.11□□□□□ -2.07
CLHC1Q8NHS4 AP001646.1-201ENST00000527936 915 ntBASIC2.11□□□□□ -2.07
CLHC1Q8NHS4 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
CLHC1Q8NHS4 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
CLHC1Q8NHS4 HIGD1AP17-201ENST00000554576 276 ntBASIC2.11□□□□□ -2.07
CLHC1Q8NHS4 AC090615.1-201ENST00000577519 154 ntBASIC2.11□□□□□ -2.07
CLHC1Q8NHS4 MIR4672-201ENST00000583126 81 ntBASIC2.11□□□□□ -2.07
CLHC1Q8NHS4 AC007229.1-201ENST00000590455 412 ntBASIC2.11□□□□□ -2.07
CLHC1Q8NHS4 AC010678.1-201ENST00000614118 713 ntBASIC2.11□□□□□ -2.07
CLHC1Q8NHS4 SDR42E1P2-201ENST00000614861 481 ntBASIC2.11□□□□□ -2.07
CLHC1Q8NHS4 SDR42E1P4-201ENST00000620894 481 ntBASIC2.11□□□□□ -2.07
CLHC1Q8NHS4 AP002791.1-201ENST00000623291 381 ntBASIC2.11□□□□□ -2.07
CLHC1Q8NHS4 CTSLP2-204ENST00000629029 392 ntBASIC2.11□□□□□ -2.07
CLHC1Q8NHS4 AC006927.2-201ENST00000639256 389 ntBASIC2.11□□□□□ -2.07
CLHC1Q8NHS4 CKAP2P1-201ENST00000555477 2049 ntBASIC2.11□□□□□ -2.07
CLHC1Q8NHS4 AC006020.1-201ENST00000420179 1854 ntBASIC2.11□□□□□ -2.07
CLHC1Q8NHS4 AC107982.1-201ENST00000507171 1300 ntBASIC2.11□□□□□ -2.07
CLHC1Q8NHS4 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC2.11□□□□□ -2.07
CLHC1Q8NHS4 KPNA2P1-201ENST00000458289 1591 ntBASIC2.1□□□□□ -2.07
CLHC1Q8NHS4 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
CLHC1Q8NHS4 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.1□□□□□ -2.07
CLHC1Q8NHS4 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
CLHC1Q8NHS4 RNU6-884P-201ENST00000363889 107 ntBASIC2.1□□□□□ -2.07
CLHC1Q8NHS4 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC2.1□□□□□ -2.07
CLHC1Q8NHS4 SNORA51.11-201ENST00000384442 131 ntBASIC2.1□□□□□ -2.07
CLHC1Q8NHS4 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC2.1□□□□□ -2.07
CLHC1Q8NHS4 AL109755.1-201ENST00000401791 649 ntBASIC2.1□□□□□ -2.07
CLHC1Q8NHS4 RN7SKP158-201ENST00000410453 326 ntBASIC2.1□□□□□ -2.07
CLHC1Q8NHS4 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC2.1□□□□□ -2.07
CLHC1Q8NHS4 AC104653.1-201ENST00000420579 578 ntTSL 2 BASIC2.1□□□□□ -2.07
CLHC1Q8NHS4 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC2.1□□□□□ -2.07
CLHC1Q8NHS4 AC016691.1-201ENST00000441321 413 ntBASIC2.1□□□□□ -2.07
CLHC1Q8NHS4 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC2.1□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 132.4 ms