Protein–RNA interactions for Protein: Q8N9L1

ZIC4, Zinc finger protein ZIC 4, humanhuman

Predictions only

Length 334 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC4Q8N9L1 RNU6-359P-201ENST00000365466 108 ntBASIC1.9□□□□□ -2.11
ZIC4Q8N9L1 SPHAR-201ENST00000366688 648 ntAPPRIS P1 BASIC1.9□□□□□ -2.11
ZIC4Q8N9L1 SNORA51.11-201ENST00000384442 131 ntBASIC1.9□□□□□ -2.11
ZIC4Q8N9L1 RNU6-140P-201ENST00000384566 108 ntBASIC1.9□□□□□ -2.11
ZIC4Q8N9L1 Y_RNA.578-201ENST00000390903 88 ntBASIC1.9□□□□□ -2.11
ZIC4Q8N9L1 RSL24D1P4-201ENST00000400938 484 ntBASIC1.9□□□□□ -2.11
ZIC4Q8N9L1 AL109755.1-201ENST00000401791 649 ntBASIC1.9□□□□□ -2.11
ZIC4Q8N9L1 RNA5SP425-201ENST00000410336 112 ntBASIC1.9□□□□□ -2.11
ZIC4Q8N9L1 AL161449.1-201ENST00000414531 1199 ntBASIC1.9□□□□□ -2.11
ZIC4Q8N9L1 AC093157.2-201ENST00000414686 671 ntTSL 5 BASIC1.9□□□□□ -2.11
ZIC4Q8N9L1 AL135786.1-201ENST00000415892 214 ntBASIC1.9□□□□□ -2.11
ZIC4Q8N9L1 Z75741.2-201ENST00000417272 1167 ntBASIC1.9□□□□□ -2.11
ZIC4Q8N9L1 MORF4L1P6-201ENST00000418771 268 ntBASIC1.9□□□□□ -2.11
ZIC4Q8N9L1 SEPT2P1-201ENST00000419651 180 ntBASIC1.9□□□□□ -2.11
ZIC4Q8N9L1 AC005005.2-201ENST00000420779 380 ntBASIC1.9□□□□□ -2.11
ZIC4Q8N9L1 AC013262.1-201ENST00000426710 252 ntBASIC1.9□□□□□ -2.11
ZIC4Q8N9L1 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
ZIC4Q8N9L1 AL139415.2-201ENST00000431968 163 ntBASIC1.9□□□□□ -2.11
ZIC4Q8N9L1 AL157387.1-201ENST00000436077 335 ntTSL 2 BASIC1.9□□□□□ -2.11
ZIC4Q8N9L1 FAM103A2P-201ENST00000444122 354 ntBASIC1.9□□□□□ -2.11
ZIC4Q8N9L1 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC1.9□□□□□ -2.11
ZIC4Q8N9L1 AC011753.1-201ENST00000451001 220 ntBASIC1.9□□□□□ -2.11
ZIC4Q8N9L1 MTND1P9-201ENST00000453775 944 ntBASIC1.9□□□□□ -2.11
ZIC4Q8N9L1 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC1.9□□□□□ -2.11
ZIC4Q8N9L1 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC1.9□□□□□ -2.11
ZIC4Q8N9L1 RNU7-26P-201ENST00000458980 63 ntBASIC1.9□□□□□ -2.11
ZIC4Q8N9L1 AC107626.1-201ENST00000471084 183 ntBASIC1.9□□□□□ -2.11
ZIC4Q8N9L1 RBM43P1-201ENST00000476891 1081 ntBASIC1.9□□□□□ -2.11
ZIC4Q8N9L1 AC069528.1-202ENST00000482888 637 ntBASIC1.9□□□□□ -2.11
ZIC4Q8N9L1 FAM172BP-201ENST00000487497 1089 ntBASIC1.9□□□□□ -2.11
ZIC4Q8N9L1 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC1.9□□□□□ -2.11
ZIC4Q8N9L1 RNU6ATAC13P-201ENST00000516152 131 ntBASIC1.9□□□□□ -2.11
ZIC4Q8N9L1 RNU6-714P-201ENST00000516963 103 ntBASIC1.9□□□□□ -2.11
ZIC4Q8N9L1 HMGN1P28-201ENST00000521340 364 ntBASIC1.9□□□□□ -2.11
ZIC4Q8N9L1 AP003168.1-201ENST00000530091 307 ntBASIC1.9□□□□□ -2.11
ZIC4Q8N9L1 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC1.9□□□□□ -2.11
ZIC4Q8N9L1 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC1.9□□□□□ -2.11
ZIC4Q8N9L1 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC1.9□□□□□ -2.11
ZIC4Q8N9L1 AL118556.1-201ENST00000555257 502 ntTSL 2 BASIC1.9□□□□□ -2.11
ZIC4Q8N9L1 LINC02274-201ENST00000555539 1174 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
ZIC4Q8N9L1 AC023825.1-201ENST00000566704 1030 ntBASIC1.9□□□□□ -2.11
ZIC4Q8N9L1 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC1.9□□□□□ -2.11
ZIC4Q8N9L1 AC004987.4-201ENST00000603383 338 ntBASIC1.9□□□□□ -2.11
ZIC4Q8N9L1 AP002802.2-201ENST00000605877 235 ntBASIC1.9□□□□□ -2.11
ZIC4Q8N9L1 LINC02098-202ENST00000609260 554 ntTSL 3 BASIC1.9□□□□□ -2.11
ZIC4Q8N9L1 MIR6132-201ENST00000622083 109 ntBASIC1.9□□□□□ -2.11
ZIC4Q8N9L1 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC1.9□□□□□ -2.11
ZIC4Q8N9L1 AP000943.4-201ENST00000622912 357 ntBASIC1.9□□□□□ -2.11
ZIC4Q8N9L1 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC1.9□□□□□ -2.11
ZIC4Q8N9L1 AC073592.7-201ENST00000623659 507 ntBASIC1.9□□□□□ -2.11
ZIC4Q8N9L1 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC1.9□□□□□ -2.11
ZIC4Q8N9L1 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC1.9□□□□□ -2.11
ZIC4Q8N9L1 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.11
ZIC4Q8N9L1 AL079343.1-201ENST00000572358 1771 ntBASIC1.9□□□□□ -2.11
ZIC4Q8N9L1 DDX10P1-201ENST00000448545 1933 ntBASIC1.89□□□□□ -2.11
ZIC4Q8N9L1 SNORA63.3-201ENST00000362682 132 ntBASIC1.89□□□□□ -2.11
ZIC4Q8N9L1 SNORA38-201ENST00000363946 132 ntBASIC1.89□□□□□ -2.11
ZIC4Q8N9L1 SNORA64-201ENST00000384674 134 ntBASIC1.89□□□□□ -2.11
ZIC4Q8N9L1 AL023284.1-201ENST00000403956 276 ntBASIC1.89□□□□□ -2.11
ZIC4Q8N9L1 SNORA11.4-201ENST00000408823 129 ntBASIC1.89□□□□□ -2.11
ZIC4Q8N9L1 RPS15AP5-201ENST00000436276 388 ntBASIC1.89□□□□□ -2.11
ZIC4Q8N9L1 COX6CP12-201ENST00000446748 202 ntBASIC1.89□□□□□ -2.11
ZIC4Q8N9L1 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC1.89□□□□□ -2.11
ZIC4Q8N9L1 PCDH9-AS4-201ENST00000456459 436 ntTSL 3 BASIC1.89□□□□□ -2.11
ZIC4Q8N9L1 RPL26P9-201ENST00000457466 433 ntBASIC1.89□□□□□ -2.11
ZIC4Q8N9L1 RPL9P6-201ENST00000492764 598 ntBASIC1.89□□□□□ -2.11
ZIC4Q8N9L1 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC1.89□□□□□ -2.11
ZIC4Q8N9L1 RN7SKP31-201ENST00000516354 278 ntBASIC1.89□□□□□ -2.11
ZIC4Q8N9L1 RNU6-1028P-201ENST00000517164 93 ntBASIC1.89□□□□□ -2.11
ZIC4Q8N9L1 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC1.89□□□□□ -2.11
ZIC4Q8N9L1 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC1.89□□□□□ -2.11
ZIC4Q8N9L1 AC023824.2-201ENST00000566185 400 ntBASIC1.89□□□□□ -2.11
ZIC4Q8N9L1 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC1.89□□□□□ -2.11
ZIC4Q8N9L1 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC1.89□□□□□ -2.11
ZIC4Q8N9L1 MIR4658-201ENST00000584344 65 ntBASIC1.89□□□□□ -2.11
ZIC4Q8N9L1 AC002545.1-201ENST00000592511 181 ntBASIC1.89□□□□□ -2.11
ZIC4Q8N9L1 BBIP1P1-201ENST00000602999 279 ntBASIC1.89□□□□□ -2.11
ZIC4Q8N9L1 AL445264.1-201ENST00000621719 171 ntBASIC1.89□□□□□ -2.11
ZIC4Q8N9L1 CU459211.1-201ENST00000635667 749 ntBASIC1.89□□□□□ -2.11
ZIC4Q8N9L1 MTND1P37-201ENST00000636562 264 ntBASIC1.89□□□□□ -2.11
ZIC4Q8N9L1 PSMD5-AS1-215ENST00000640622 205 ntBASIC1.89□□□□□ -2.11
ZIC4Q8N9L1 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
ZIC4Q8N9L1 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC1.88□□□□□ -2.11
ZIC4Q8N9L1 AC009902.3-201ENST00000606235 2172 ntBASIC1.88□□□□□ -2.11
ZIC4Q8N9L1 AC010329.5-201ENST00000623497 2174 ntBASIC1.88□□□□□ -2.11
ZIC4Q8N9L1 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC1.88□□□□□ -2.11
ZIC4Q8N9L1 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC1.88□□□□□ -2.11
ZIC4Q8N9L1 MIRLET7G-201ENST00000362280 84 ntBASIC1.88□□□□□ -2.11
ZIC4Q8N9L1 RNU6-97P-201ENST00000363387 104 ntBASIC1.88□□□□□ -2.11
ZIC4Q8N9L1 SNORA23-201ENST00000365128 182 ntBASIC1.88□□□□□ -2.11
ZIC4Q8N9L1 SNORA67.3-201ENST00000384366 140 ntBASIC1.88□□□□□ -2.11
ZIC4Q8N9L1 MIR888-201ENST00000401186 77 ntBASIC1.88□□□□□ -2.11
ZIC4Q8N9L1 RN7SKP32-201ENST00000410167 303 ntBASIC1.88□□□□□ -2.11
ZIC4Q8N9L1 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC1.88□□□□□ -2.11
ZIC4Q8N9L1 DPH3P2-201ENST00000422618 250 ntBASIC1.88□□□□□ -2.11
ZIC4Q8N9L1 MTCO3P30-201ENST00000426425 670 ntBASIC1.88□□□□□ -2.11
ZIC4Q8N9L1 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC1.88□□□□□ -2.11
ZIC4Q8N9L1 AC096638.1-201ENST00000444678 216 ntBASIC1.88□□□□□ -2.11
ZIC4Q8N9L1 ATG12P2-201ENST00000456830 416 ntBASIC1.88□□□□□ -2.11
ZIC4Q8N9L1 AC104090.1-201ENST00000506341 1171 ntBASIC1.88□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 114.2 ms