Protein–RNA interactions for Protein: Q8N6Y1

PCDH20, Protocadherin-20, humanhuman

Known RBP Predictions only

Length 951 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH20Q8N6Y1 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC3.34□□□□□ -1.87
PCDH20Q8N6Y1 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
PCDH20Q8N6Y1 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC3.34□□□□□ -1.88
PCDH20Q8N6Y1 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
PCDH20Q8N6Y1 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC3.33□□□□□ -1.88
PCDH20Q8N6Y1 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC3.33□□□□□ -1.88
PCDH20Q8N6Y1 Y_RNA.6-201ENST00000362350 114 ntBASIC3.33□□□□□ -1.88
PCDH20Q8N6Y1 RNU6-511P-201ENST00000363496 107 ntBASIC3.33□□□□□ -1.88
PCDH20Q8N6Y1 SNORA38.1-201ENST00000364172 131 ntBASIC3.33□□□□□ -1.88
PCDH20Q8N6Y1 RNY1P12-201ENST00000364251 105 ntBASIC3.33□□□□□ -1.88
PCDH20Q8N6Y1 U3.11-201ENST00000364476 212 ntBASIC3.33□□□□□ -1.88
PCDH20Q8N6Y1 SNORA23-201ENST00000365128 182 ntBASIC3.33□□□□□ -1.88
PCDH20Q8N6Y1 AL357075.1-201ENST00000404107 726 ntBASIC3.33□□□□□ -1.88
PCDH20Q8N6Y1 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC3.33□□□□□ -1.88
PCDH20Q8N6Y1 RPL26P6-201ENST00000440913 438 ntBASIC3.33□□□□□ -1.88
PCDH20Q8N6Y1 RPS3AP12-201ENST00000443616 753 ntBASIC3.33□□□□□ -1.88
PCDH20Q8N6Y1 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC3.33□□□□□ -1.88
PCDH20Q8N6Y1 NDUFAF4P4-201ENST00000454883 502 ntBASIC3.33□□□□□ -1.88
PCDH20Q8N6Y1 RPL23AP31-201ENST00000456160 467 ntBASIC3.33□□□□□ -1.88
PCDH20Q8N6Y1 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC3.33□□□□□ -1.88
PCDH20Q8N6Y1 AL049714.1-201ENST00000466686 347 ntBASIC3.33□□□□□ -1.88
PCDH20Q8N6Y1 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
PCDH20Q8N6Y1 HMGB1P29-201ENST00000505659 499 ntBASIC3.33□□□□□ -1.88
PCDH20Q8N6Y1 SNORA64.4-201ENST00000516632 81 ntBASIC3.33□□□□□ -1.88
PCDH20Q8N6Y1 RN7SKP289-201ENST00000517244 295 ntBASIC3.33□□□□□ -1.88
PCDH20Q8N6Y1 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC3.33□□□□□ -1.88
PCDH20Q8N6Y1 ERHP1-201ENST00000523006 310 ntBASIC3.33□□□□□ -1.88
PCDH20Q8N6Y1 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC3.33□□□□□ -1.88
PCDH20Q8N6Y1 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC3.33□□□□□ -1.88
PCDH20Q8N6Y1 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC3.33□□□□□ -1.88
PCDH20Q8N6Y1 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC3.33□□□□□ -1.88
PCDH20Q8N6Y1 AC123904.3-201ENST00000547218 814 ntBASIC3.33□□□□□ -1.88
PCDH20Q8N6Y1 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC3.33□□□□□ -1.88
PCDH20Q8N6Y1 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC3.33□□□□□ -1.88
PCDH20Q8N6Y1 uc_338.1-201ENST00000612113 180 ntBASIC3.33□□□□□ -1.88
PCDH20Q8N6Y1 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC3.33□□□□□ -1.88
PCDH20Q8N6Y1 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC3.33□□□□□ -1.88
PCDH20Q8N6Y1 AL442067.2-201ENST00000614033 363 ntBASIC3.33□□□□□ -1.88
PCDH20Q8N6Y1 DLEU1_1.1-201ENST00000618107 190 ntBASIC3.33□□□□□ -1.88
PCDH20Q8N6Y1 LRRC77P-213ENST00000637727 880 ntBASIC3.33□□□□□ -1.88
PCDH20Q8N6Y1 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.33□□□□□ -1.88
PCDH20Q8N6Y1 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.33□□□□□ -1.88
PCDH20Q8N6Y1 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.33□□□□□ -1.88
PCDH20Q8N6Y1 AC027514.1-201ENST00000588561 1603 ntBASIC3.33□□□□□ -1.88
PCDH20Q8N6Y1 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.32□□□□□ -1.88
PCDH20Q8N6Y1 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC3.32□□□□□ -1.88
PCDH20Q8N6Y1 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.32□□□□□ -1.88
PCDH20Q8N6Y1 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
PCDH20Q8N6Y1 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
PCDH20Q8N6Y1 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.32□□□□□ -1.88
PCDH20Q8N6Y1 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.32□□□□□ -1.88
PCDH20Q8N6Y1 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
PCDH20Q8N6Y1 RNU1-70P-201ENST00000362618 164 ntBASIC3.32□□□□□ -1.88
PCDH20Q8N6Y1 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
PCDH20Q8N6Y1 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC3.32□□□□□ -1.88
PCDH20Q8N6Y1 SNORA48.8-201ENST00000391324 134 ntBASIC3.32□□□□□ -1.88
PCDH20Q8N6Y1 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC3.32□□□□□ -1.88
PCDH20Q8N6Y1 AL451074.3-201ENST00000437709 472 ntBASIC3.32□□□□□ -1.88
PCDH20Q8N6Y1 Z75741.1-201ENST00000446793 314 ntBASIC3.32□□□□□ -1.88
PCDH20Q8N6Y1 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC3.32□□□□□ -1.88
PCDH20Q8N6Y1 AC108860.1-201ENST00000484521 383 ntBASIC3.32□□□□□ -1.88
PCDH20Q8N6Y1 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC3.32□□□□□ -1.88
PCDH20Q8N6Y1 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC3.32□□□□□ -1.88
PCDH20Q8N6Y1 AC010493.1-201ENST00000513479 292 ntBASIC3.32□□□□□ -1.88
PCDH20Q8N6Y1 AC010265.1-201ENST00000513509 211 ntBASIC3.32□□□□□ -1.88
PCDH20Q8N6Y1 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC3.32□□□□□ -1.88
PCDH20Q8N6Y1 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC3.32□□□□□ -1.88
PCDH20Q8N6Y1 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.32□□□□□ -1.88
PCDH20Q8N6Y1 RNU6-506P-201ENST00000516553 94 ntBASIC3.32□□□□□ -1.88
PCDH20Q8N6Y1 RNU6-1220P-201ENST00000517126 108 ntBASIC3.32□□□□□ -1.88
PCDH20Q8N6Y1 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC3.32□□□□□ -1.88
PCDH20Q8N6Y1 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC3.32□□□□□ -1.88
PCDH20Q8N6Y1 AC104027.1-201ENST00000521887 300 ntBASIC3.32□□□□□ -1.88
PCDH20Q8N6Y1 AC100870.1-201ENST00000522035 505 ntBASIC3.32□□□□□ -1.88
PCDH20Q8N6Y1 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
PCDH20Q8N6Y1 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC3.32□□□□□ -1.88
PCDH20Q8N6Y1 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC3.32□□□□□ -1.88
PCDH20Q8N6Y1 MIR3690-201ENST00000580266 75 ntBASIC3.32□□□□□ -1.88
PCDH20Q8N6Y1 AF038458.1-201ENST00000588406 262 ntBASIC3.32□□□□□ -1.88
PCDH20Q8N6Y1 AP001330.4-201ENST00000604350 154 ntBASIC3.32□□□□□ -1.88
PCDH20Q8N6Y1 YPEL5P2-201ENST00000605553 359 ntBASIC3.32□□□□□ -1.88
PCDH20Q8N6Y1 AL355810.1-201ENST00000614629 552 ntBASIC3.32□□□□□ -1.88
PCDH20Q8N6Y1 MIR3651-201ENST00000630427 90 ntBASIC3.32□□□□□ -1.88
PCDH20Q8N6Y1 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
PCDH20Q8N6Y1 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.32□□□□□ -1.88
PCDH20Q8N6Y1 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
PCDH20Q8N6Y1 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
PCDH20Q8N6Y1 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC3.32□□□□□ -1.88
PCDH20Q8N6Y1 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.31□□□□□ -1.88
PCDH20Q8N6Y1 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
PCDH20Q8N6Y1 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC3.31□□□□□ -1.88
PCDH20Q8N6Y1 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
PCDH20Q8N6Y1 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC3.31□□□□□ -1.88
PCDH20Q8N6Y1 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC3.31□□□□□ -1.88
PCDH20Q8N6Y1 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
PCDH20Q8N6Y1 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
PCDH20Q8N6Y1 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
PCDH20Q8N6Y1 RNU6-181P-201ENST00000363225 107 ntBASIC3.31□□□□□ -1.88
PCDH20Q8N6Y1 RNU6-169P-201ENST00000365336 107 ntBASIC3.31□□□□□ -1.88
PCDH20Q8N6Y1 RNU6-282P-201ENST00000365357 103 ntBASIC3.31□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 111.1 ms