Protein–RNA interactions for Protein: Q8N205

SYNE4, Nesprin-4, humanhuman

Predictions only

Length 404 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4Q8N205 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC4.33□□□□□ -1.72
SYNE4Q8N205 AC007687.1-201ENST00000602704 304 ntBASIC4.33□□□□□ -1.72
SYNE4Q8N205 AC008638.3-201ENST00000603341 463 ntBASIC4.33□□□□□ -1.72
SYNE4Q8N205 LLPHP1-201ENST00000603571 367 ntBASIC4.33□□□□□ -1.72
SYNE4Q8N205 AC011468.4-201ENST00000603942 409 ntBASIC4.33□□□□□ -1.72
SYNE4Q8N205 AL354950.2-201ENST00000617939 290 ntBASIC4.33□□□□□ -1.72
SYNE4Q8N205 AL603758.1-201ENST00000618654 241 ntBASIC4.33□□□□□ -1.72
SYNE4Q8N205 AL133216.2-202ENST00000634512 349 ntBASIC4.33□□□□□ -1.72
SYNE4Q8N205 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC4.33□□□□□ -1.72
SYNE4Q8N205 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC4.33□□□□□ -1.72
SYNE4Q8N205 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC4.33□□□□□ -1.72
SYNE4Q8N205 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
SYNE4Q8N205 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
SYNE4Q8N205 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC4.32□□□□□ -1.72
SYNE4Q8N205 MTND5P33-201ENST00000571250 1450 ntBASIC4.32□□□□□ -1.72
SYNE4Q8N205 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
SYNE4Q8N205 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
SYNE4Q8N205 MTND4P35-201ENST00000604257 1375 ntBASIC4.32□□□□□ -1.72
SYNE4Q8N205 NACAP2-201ENST00000318548 624 ntBASIC4.32□□□□□ -1.72
SYNE4Q8N205 RNA5SP197-201ENST00000363357 119 ntBASIC4.32□□□□□ -1.72
SYNE4Q8N205 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
SYNE4Q8N205 AL136116.1-201ENST00000403591 381 ntBASIC4.32□□□□□ -1.72
SYNE4Q8N205 U3.39-201ENST00000408569 239 ntBASIC4.32□□□□□ -1.72
SYNE4Q8N205 RPS15AP12-201ENST00000419498 388 ntBASIC4.32□□□□□ -1.72
SYNE4Q8N205 RBM6-203ENST00000421682 684 ntTSL 2 BASIC4.32□□□□□ -1.72
SYNE4Q8N205 RPS12P5-201ENST00000423449 371 ntBASIC4.32□□□□□ -1.72
SYNE4Q8N205 PSMA6P3-201ENST00000428242 164 ntBASIC4.32□□□□□ -1.72
SYNE4Q8N205 AL590233.1-201ENST00000430017 456 ntBASIC4.32□□□□□ -1.72
SYNE4Q8N205 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC4.32□□□□□ -1.72
SYNE4Q8N205 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC4.32□□□□□ -1.72
SYNE4Q8N205 AC020893.1-201ENST00000502452 580 ntBASIC4.32□□□□□ -1.72
SYNE4Q8N205 BTF3L4P4-201ENST00000506381 449 ntBASIC4.32□□□□□ -1.72
SYNE4Q8N205 RNU6-1045P-201ENST00000516321 107 ntBASIC4.32□□□□□ -1.72
SYNE4Q8N205 RNU4ATAC10P-201ENST00000516967 122 ntBASIC4.32□□□□□ -1.72
SYNE4Q8N205 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC4.32□□□□□ -1.72
SYNE4Q8N205 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
SYNE4Q8N205 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC4.32□□□□□ -1.72
SYNE4Q8N205 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC4.32□□□□□ -1.72
SYNE4Q8N205 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC4.32□□□□□ -1.72
SYNE4Q8N205 KLKP1-201ENST00000595979 403 ntBASIC4.32□□□□□ -1.72
SYNE4Q8N205 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC4.32□□□□□ -1.72
SYNE4Q8N205 AC015813.4-201ENST00000610469 179 ntBASIC4.32□□□□□ -1.72
SYNE4Q8N205 AP003355.3-201ENST00000623465 114 ntBASIC4.32□□□□□ -1.72
SYNE4Q8N205 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC4.32□□□□□ -1.72
SYNE4Q8N205 ASNSP1-201ENST00000518311 1939 ntBASIC4.32□□□□□ -1.72
SYNE4Q8N205 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
SYNE4Q8N205 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC4.32□□□□□ -1.72
SYNE4Q8N205 AL356274.2-201ENST00000624379 3752 ntBASIC4.32□□□□□ -1.72
SYNE4Q8N205 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC4.32□□□□□ -1.72
SYNE4Q8N205 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
SYNE4Q8N205 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
SYNE4Q8N205 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
SYNE4Q8N205 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC4.31□□□□□ -1.72
SYNE4Q8N205 SNORA63C-201ENST00000364578 129 ntBASIC4.31□□□□□ -1.72
SYNE4Q8N205 RNU6-108P-201ENST00000365558 107 ntBASIC4.31□□□□□ -1.72
SYNE4Q8N205 RNU4-20P-201ENST00000365601 151 ntBASIC4.31□□□□□ -1.72
SYNE4Q8N205 RNU6-738P-201ENST00000384531 106 ntBASIC4.31□□□□□ -1.72
SYNE4Q8N205 Y_RNA.615-201ENST00000410769 117 ntBASIC4.31□□□□□ -1.72
SYNE4Q8N205 AC063979.1-201ENST00000415539 377 ntBASIC4.31□□□□□ -1.72
SYNE4Q8N205 RPL31P45-201ENST00000419532 356 ntBASIC4.31□□□□□ -1.72
SYNE4Q8N205 AL645937.1-202ENST00000421799 937 ntBASIC4.31□□□□□ -1.72
SYNE4Q8N205 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC4.31□□□□□ -1.72
SYNE4Q8N205 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC4.31□□□□□ -1.72
SYNE4Q8N205 SRIP2-201ENST00000428470 166 ntBASIC4.31□□□□□ -1.72
SYNE4Q8N205 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC4.31□□□□□ -1.72
SYNE4Q8N205 RPL7P28-201ENST00000437739 740 ntBASIC4.31□□□□□ -1.72
SYNE4Q8N205 AL356535.1-201ENST00000440335 398 ntBASIC4.31□□□□□ -1.72
SYNE4Q8N205 HMGN2P26-201ENST00000463169 339 ntBASIC4.31□□□□□ -1.72
SYNE4Q8N205 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC4.31□□□□□ -1.72
SYNE4Q8N205 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC4.31□□□□□ -1.72
SYNE4Q8N205 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
SYNE4Q8N205 RNU4-49P-201ENST00000516080 140 ntBASIC4.31□□□□□ -1.72
SYNE4Q8N205 RNU6-1314P-201ENST00000517139 104 ntBASIC4.31□□□□□ -1.72
SYNE4Q8N205 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC4.31□□□□□ -1.72
SYNE4Q8N205 AC087241.2-201ENST00000535801 324 ntBASIC4.31□□□□□ -1.72
SYNE4Q8N205 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC4.31□□□□□ -1.72
SYNE4Q8N205 APAF1-207ENST00000547743 651 ntTSL 3 BASIC4.31□□□□□ -1.72
SYNE4Q8N205 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
SYNE4Q8N205 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC4.31□□□□□ -1.72
SYNE4Q8N205 AL139395.1-201ENST00000603662 160 ntBASIC4.31□□□□□ -1.72
SYNE4Q8N205 AC121334.2-201ENST00000605387 271 ntBASIC4.31□□□□□ -1.72
SYNE4Q8N205 uc_338.5-201ENST00000611839 155 ntBASIC4.31□□□□□ -1.72
SYNE4Q8N205 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC4.31□□□□□ -1.72
SYNE4Q8N205 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC4.31□□□□□ -1.72
SYNE4Q8N205 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
SYNE4Q8N205 OR4G1P-203ENST00000641984 1631 ntBASIC4.31□□□□□ -1.72
SYNE4Q8N205 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC4.3□□□□□ -1.72
SYNE4Q8N205 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
SYNE4Q8N205 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
SYNE4Q8N205 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
SYNE4Q8N205 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
SYNE4Q8N205 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC4.3□□□□□ -1.72
SYNE4Q8N205 IARS-201ENST00000375627 697 ntTSL 3 BASIC4.3□□□□□ -1.72
SYNE4Q8N205 MIR606-201ENST00000384851 96 ntBASIC4.3□□□□□ -1.72
SYNE4Q8N205 UBE2V1P2-201ENST00000397758 440 ntBASIC4.3□□□□□ -1.72
SYNE4Q8N205 RNU6-373P-201ENST00000411247 98 ntBASIC4.3□□□□□ -1.72
SYNE4Q8N205 MTND3P8-201ENST00000412909 339 ntBASIC4.3□□□□□ -1.72
SYNE4Q8N205 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC4.3□□□□□ -1.72
SYNE4Q8N205 ELOCP4-201ENST00000420090 333 ntBASIC4.3□□□□□ -1.72
SYNE4Q8N205 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC4.3□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 102.2 ms