Protein–RNA interactions for Protein: Q8IVW4

CDKL3, Cyclin-dependent kinase-like 3, humanhuman

Predicted RBP Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL3Q8IVW4 Z85995.1-201ENST00000415547 335 ntBASIC2.31□□□□□ -2.04
CDKL3Q8IVW4 TIMM9P2-201ENST00000419324 266 ntBASIC2.31□□□□□ -2.04
CDKL3Q8IVW4 AL139413.1-201ENST00000421309 217 ntBASIC2.31□□□□□ -2.04
CDKL3Q8IVW4 AL354692.1-201ENST00000423044 315 ntBASIC2.31□□□□□ -2.04
CDKL3Q8IVW4 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC2.31□□□□□ -2.04
CDKL3Q8IVW4 PGBD4P3-201ENST00000440731 581 ntBASIC2.31□□□□□ -2.04
CDKL3Q8IVW4 EEF1A1P39-201ENST00000440791 250 ntBASIC2.31□□□□□ -2.04
CDKL3Q8IVW4 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC2.31□□□□□ -2.04
CDKL3Q8IVW4 AC007327.1-201ENST00000447461 264 ntBASIC2.31□□□□□ -2.04
CDKL3Q8IVW4 EXOSC3P1-201ENST00000448649 500 ntBASIC2.31□□□□□ -2.04
CDKL3Q8IVW4 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC2.31□□□□□ -2.04
CDKL3Q8IVW4 LRRC70-203ENST00000491184 703 ntTSL 3 BASIC2.31□□□□□ -2.04
CDKL3Q8IVW4 AC017037.2-201ENST00000513850 890 ntBASIC2.31□□□□□ -2.04
CDKL3Q8IVW4 AC012625.1-201ENST00000515153 625 ntTSL 5 BASIC2.31□□□□□ -2.04
CDKL3Q8IVW4 SCARNA15.2-201ENST00000516409 127 ntBASIC2.31□□□□□ -2.04
CDKL3Q8IVW4 RNU6-1282P-201ENST00000516735 96 ntBASIC2.31□□□□□ -2.04
CDKL3Q8IVW4 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC2.31□□□□□ -2.04
CDKL3Q8IVW4 MAL2-206ENST00000522187 547 ntTSL 4 BASIC2.31□□□□□ -2.04
CDKL3Q8IVW4 AC124947.2-202ENST00000552735 133 ntBASIC2.31□□□□□ -2.04
CDKL3Q8IVW4 AL512347.1-201ENST00000566420 503 ntBASIC2.31□□□□□ -2.04
CDKL3Q8IVW4 RPS3AP23-202ENST00000574601 686 ntBASIC2.31□□□□□ -2.04
CDKL3Q8IVW4 AC090615.1-201ENST00000577519 154 ntBASIC2.31□□□□□ -2.04
CDKL3Q8IVW4 MIR3908-201ENST00000579798 126 ntBASIC2.31□□□□□ -2.04
CDKL3Q8IVW4 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
CDKL3Q8IVW4 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC2.31□□□□□ -2.04
CDKL3Q8IVW4 AL591441.2-201ENST00000620059 535 ntTSL 5 BASIC2.31□□□□□ -2.04
CDKL3Q8IVW4 AC231657.1-201ENST00000624313 397 ntBASIC2.31□□□□□ -2.04
CDKL3Q8IVW4 IGHVIII-44-202ENST00000636235 289 ntBASIC2.31□□□□□ -2.04
CDKL3Q8IVW4 AC099654.9-201ENST00000637055 678 ntBASIC2.31□□□□□ -2.04
CDKL3Q8IVW4 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC2.31□□□□□ -2.04
CDKL3Q8IVW4 AC005539.1-201ENST00000443768 1479 ntBASIC2.31□□□□□ -2.04
CDKL3Q8IVW4 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.31□□□□□ -2.04
CDKL3Q8IVW4 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.31□□□□□ -2.04
CDKL3Q8IVW4 AL079343.1-201ENST00000572358 1771 ntBASIC2.31□□□□□ -2.04
CDKL3Q8IVW4 AL049641.1-201ENST00000441055 1948 ntBASIC2.3□□□□□ -2.04
CDKL3Q8IVW4 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC2.3□□□□□ -2.04
CDKL3Q8IVW4 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
CDKL3Q8IVW4 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.3□□□□□ -2.04
CDKL3Q8IVW4 ZBTB8OSP1-201ENST00000342688 498 ntBASIC2.3□□□□□ -2.04
CDKL3Q8IVW4 RNU6-343P-201ENST00000364709 104 ntBASIC2.3□□□□□ -2.04
CDKL3Q8IVW4 SNORA36C-201ENST00000384289 132 ntBASIC2.3□□□□□ -2.04
CDKL3Q8IVW4 SNORA80E-201ENST00000384744 137 ntBASIC2.3□□□□□ -2.04
CDKL3Q8IVW4 ERHP2-201ENST00000402323 299 ntBASIC2.3□□□□□ -2.04
CDKL3Q8IVW4 RNU4-22P-201ENST00000411058 166 ntBASIC2.3□□□□□ -2.04
CDKL3Q8IVW4 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC2.3□□□□□ -2.04
CDKL3Q8IVW4 LINC01953-201ENST00000426870 717 ntTSL 5 BASIC2.3□□□□□ -2.04
CDKL3Q8IVW4 USP9YP11-201ENST00000427537 717 ntBASIC2.3□□□□□ -2.04
CDKL3Q8IVW4 OR10R1P-201ENST00000441524 1141 ntBASIC2.3□□□□□ -2.04
CDKL3Q8IVW4 FGF7P5-201ENST00000441829 291 ntBASIC2.3□□□□□ -2.04
CDKL3Q8IVW4 ARPC3P5-201ENST00000448802 534 ntBASIC2.3□□□□□ -2.04
CDKL3Q8IVW4 RNU7-136P-201ENST00000458819 69 ntBASIC2.3□□□□□ -2.04
CDKL3Q8IVW4 AC097493.1-201ENST00000463958 372 ntBASIC2.3□□□□□ -2.04
CDKL3Q8IVW4 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
CDKL3Q8IVW4 AC004263.1-201ENST00000479327 332 ntBASIC2.3□□□□□ -2.04
CDKL3Q8IVW4 PGRMC2-204ENST00000503872 1028 ntTSL 3 BASIC2.3□□□□□ -2.04
CDKL3Q8IVW4 CTD-2350J17.1-201ENST00000509228 362 ntTSL 2 BASIC2.3□□□□□ -2.04
CDKL3Q8IVW4 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC2.3□□□□□ -2.04
CDKL3Q8IVW4 AC114781.4-201ENST00000513707 639 ntBASIC2.3□□□□□ -2.04
CDKL3Q8IVW4 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC2.3□□□□□ -2.04
CDKL3Q8IVW4 BTF3P12-201ENST00000519620 469 ntBASIC2.3□□□□□ -2.04
CDKL3Q8IVW4 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC2.3□□□□□ -2.04
CDKL3Q8IVW4 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC2.3□□□□□ -2.04
CDKL3Q8IVW4 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC2.3□□□□□ -2.04
CDKL3Q8IVW4 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC2.3□□□□□ -2.04
CDKL3Q8IVW4 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC2.3□□□□□ -2.04
CDKL3Q8IVW4 MYL12B-204ENST00000584539 1064 ntAPPRIS P1 TSL 3 BASIC2.3□□□□□ -2.04
CDKL3Q8IVW4 MTND3P19-201ENST00000603825 345 ntBASIC2.3□□□□□ -2.04
CDKL3Q8IVW4 AC013412.1-201ENST00000610687 192 ntBASIC2.3□□□□□ -2.04
CDKL3Q8IVW4 MIR6840-201ENST00000611937 71 ntBASIC2.3□□□□□ -2.04
CDKL3Q8IVW4 AC005332.10-201ENST00000612725 619 ntBASIC2.3□□□□□ -2.04
CDKL3Q8IVW4 AL450472.3-201ENST00000615578 367 ntBASIC2.3□□□□□ -2.04
CDKL3Q8IVW4 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC2.3□□□□□ -2.04
CDKL3Q8IVW4 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.3□□□□□ -2.04
CDKL3Q8IVW4 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC2.3□□□□□ -2.04
CDKL3Q8IVW4 AC005336.3-201ENST00000623833 2679 ntBASIC2.3□□□□□ -2.04
CDKL3Q8IVW4 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC2.29□□□□□ -2.04
CDKL3Q8IVW4 MTND4P35-201ENST00000604257 1375 ntBASIC2.29□□□□□ -2.04
CDKL3Q8IVW4 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC2.29□□□□□ -2.04
CDKL3Q8IVW4 MIR514A1-201ENST00000385133 98 ntBASIC2.29□□□□□ -2.04
CDKL3Q8IVW4 RNU6-952P-201ENST00000391164 108 ntBASIC2.29□□□□□ -2.04
CDKL3Q8IVW4 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC2.29□□□□□ -2.04
CDKL3Q8IVW4 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC2.29□□□□□ -2.04
CDKL3Q8IVW4 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC2.29□□□□□ -2.04
CDKL3Q8IVW4 BMI1P1-201ENST00000445879 941 ntBASIC2.29□□□□□ -2.04
CDKL3Q8IVW4 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC2.29□□□□□ -2.04
CDKL3Q8IVW4 BX322784.1-201ENST00000455793 1077 ntBASIC2.29□□□□□ -2.04
CDKL3Q8IVW4 AC005410.1-202ENST00000460347 485 ntBASIC2.29□□□□□ -2.04
CDKL3Q8IVW4 MTND1P16-201ENST00000465177 898 ntBASIC2.29□□□□□ -2.04
CDKL3Q8IVW4 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC2.29□□□□□ -2.04
CDKL3Q8IVW4 RNA5SP281-201ENST00000516504 135 ntBASIC2.29□□□□□ -2.04
CDKL3Q8IVW4 SNORA31.22-201ENST00000517204 135 ntBASIC2.29□□□□□ -2.04
CDKL3Q8IVW4 CCDC7-207ENST00000535327 700 ntAPPRIS ALT2 TSL 1 (best) BASIC2.29□□□□□ -2.04
CDKL3Q8IVW4 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC2.29□□□□□ -2.04
CDKL3Q8IVW4 PRELID2P1-201ENST00000552837 301 ntBASIC2.29□□□□□ -2.04
CDKL3Q8IVW4 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC2.29□□□□□ -2.04
CDKL3Q8IVW4 AC079411.1-201ENST00000565441 795 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
CDKL3Q8IVW4 AC068135.2-201ENST00000569293 1028 ntBASIC2.29□□□□□ -2.04
CDKL3Q8IVW4 MIR4509-3-201ENST00000578671 94 ntBASIC2.29□□□□□ -2.04
CDKL3Q8IVW4 MIR4509-2-201ENST00000583920 94 ntBASIC2.29□□□□□ -2.04
CDKL3Q8IVW4 AC091057.3-201ENST00000602684 733 ntBASIC2.29□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 177.7 ms