Protein–RNA interactions for Protein: Q8IVM0

CCDC50, Coiled-coil domain-containing protein 50, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50Q8IVM0 LINC01075-201ENST00000455977 370 ntTSL 3 BASIC2.56□□□□□ -2
CCDC50Q8IVM0 AP1S2P1-201ENST00000457344 379 ntBASIC2.56□□□□□ -2
CCDC50Q8IVM0 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC2.56□□□□□ -2
CCDC50Q8IVM0 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC2.56□□□□□ -2
CCDC50Q8IVM0 RN7SKP24-201ENST00000515888 284 ntBASIC2.56□□□□□ -2
CCDC50Q8IVM0 XIRP2-AS1-201ENST00000525330 776 ntTSL 3 BASIC2.56□□□□□ -2
CCDC50Q8IVM0 TRAV28-201ENST00000557548 323 ntBASIC2.56□□□□□ -2
CCDC50Q8IVM0 VN1R92P-201ENST00000598511 928 ntBASIC2.56□□□□□ -2
CCDC50Q8IVM0 BNIP3P39-201ENST00000601077 554 ntBASIC2.56□□□□□ -2
CCDC50Q8IVM0 RPP40P2-201ENST00000603596 712 ntBASIC2.56□□□□□ -2
CCDC50Q8IVM0 AC112204.3-201ENST00000623822 332 ntBASIC2.56□□□□□ -2
CCDC50Q8IVM0 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC2.56□□□□□ -2
CCDC50Q8IVM0 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC2.56□□□□□ -2
CCDC50Q8IVM0 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
CCDC50Q8IVM0 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
CCDC50Q8IVM0 AC106754.1-201ENST00000562632 1513 ntBASIC2.56□□□□□ -2
CCDC50Q8IVM0 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
CCDC50Q8IVM0 DEFB112-201ENST00000322246 342 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
CCDC50Q8IVM0 RPL21P132-201ENST00000331267 462 ntBASIC2.55□□□□□ -2
CCDC50Q8IVM0 FTLP6-201ENST00000355274 422 ntBASIC2.55□□□□□ -2
CCDC50Q8IVM0 SNORA67.1-201ENST00000364749 141 ntBASIC2.55□□□□□ -2
CCDC50Q8IVM0 RNU6-432P-201ENST00000384196 109 ntBASIC2.55□□□□□ -2
CCDC50Q8IVM0 SNORA41-201ENST00000384675 132 ntBASIC2.55□□□□□ -2
CCDC50Q8IVM0 MIR27B-201ENST00000385129 97 ntBASIC2.55□□□□□ -2
CCDC50Q8IVM0 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC2.55□□□□□ -2
CCDC50Q8IVM0 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC2.55□□□□□ -2
CCDC50Q8IVM0 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC2.55□□□□□ -2
CCDC50Q8IVM0 AL391832.1-201ENST00000423963 423 ntTSL 5 BASIC2.55□□□□□ -2
CCDC50Q8IVM0 AC019097.1-201ENST00000424783 735 ntBASIC2.55□□□□□ -2
CCDC50Q8IVM0 AC063976.3-201ENST00000426849 329 ntBASIC2.55□□□□□ -2
CCDC50Q8IVM0 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC2.55□□□□□ -2
CCDC50Q8IVM0 GTF2IP20-201ENST00000431663 360 ntBASIC2.55□□□□□ -2
CCDC50Q8IVM0 UBE2V1P13-201ENST00000436983 439 ntBASIC2.55□□□□□ -2
CCDC50Q8IVM0 Z82210.1-201ENST00000440037 231 ntBASIC2.55□□□□□ -2
CCDC50Q8IVM0 GSAP-208ENST00000441833 737 ntTSL 1 (best) BASIC2.55□□□□□ -2
CCDC50Q8IVM0 MTATP6P30-201ENST00000443540 664 ntBASIC2.55□□□□□ -2
CCDC50Q8IVM0 AL513328.1-201ENST00000446460 224 ntBASIC2.55□□□□□ -2
CCDC50Q8IVM0 MTND4LP3-201ENST00000468320 276 ntBASIC2.55□□□□□ -2
CCDC50Q8IVM0 AC091212.1-201ENST00000474798 395 ntTSL 5 BASIC2.55□□□□□ -2
CCDC50Q8IVM0 RPS29P20-201ENST00000489592 171 ntBASIC2.55□□□□□ -2
CCDC50Q8IVM0 AC138853.1-201ENST00000503549 823 ntBASIC2.55□□□□□ -2
CCDC50Q8IVM0 AC097462.2-201ENST00000504623 481 ntBASIC2.55□□□□□ -2
CCDC50Q8IVM0 SUMO2P6-201ENST00000505273 288 ntBASIC2.55□□□□□ -2
CCDC50Q8IVM0 RNA5SP320-201ENST00000516263 124 ntBASIC2.55□□□□□ -2
CCDC50Q8IVM0 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC2.55□□□□□ -2
CCDC50Q8IVM0 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.55□□□□□ -2
CCDC50Q8IVM0 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC2.55□□□□□ -2
CCDC50Q8IVM0 MGST1-215ENST00000540056 546 ntTSL 3 BASIC2.55□□□□□ -2
CCDC50Q8IVM0 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC2.55□□□□□ -2
CCDC50Q8IVM0 AC090616.3-201ENST00000582184 217 ntBASIC2.55□□□□□ -2
CCDC50Q8IVM0 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC2.55□□□□□ -2
CCDC50Q8IVM0 HMGN2P15-201ENST00000585707 270 ntBASIC2.55□□□□□ -2
CCDC50Q8IVM0 AC061975.8-201ENST00000587058 721 ntBASIC2.55□□□□□ -2
CCDC50Q8IVM0 BNIP3P22-201ENST00000593399 556 ntBASIC2.55□□□□□ -2
CCDC50Q8IVM0 MTND4LP5-201ENST00000605152 292 ntBASIC2.55□□□□□ -2
CCDC50Q8IVM0 AC112220.3-201ENST00000605502 502 ntBASIC2.55□□□□□ -2
CCDC50Q8IVM0 AC245517.5-201ENST00000611529 162 ntBASIC2.55□□□□□ -2
CCDC50Q8IVM0 AC093838.1-201ENST00000613014 469 ntBASIC2.55□□□□□ -2
CCDC50Q8IVM0 AL139418.1-201ENST00000613613 177 ntBASIC2.55□□□□□ -2
CCDC50Q8IVM0 AC013476.2-201ENST00000614456 459 ntBASIC2.55□□□□□ -2
CCDC50Q8IVM0 AL356596.1-201ENST00000624230 379 ntBASIC2.55□□□□□ -2
CCDC50Q8IVM0 AC135776.4-201ENST00000624300 1904 ntBASIC2.55□□□□□ -2
CCDC50Q8IVM0 AC068880.5-201ENST00000624331 290 ntBASIC2.55□□□□□ -2
CCDC50Q8IVM0 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC2.55□□□□□ -2
CCDC50Q8IVM0 MTND1P37-201ENST00000636562 264 ntBASIC2.55□□□□□ -2
CCDC50Q8IVM0 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
CCDC50Q8IVM0 PCF11-AS1-201ENST00000602322 1516 ntBASIC2.54□□□□□ -2
CCDC50Q8IVM0 SNORA80A-201ENST00000363922 136 ntBASIC2.54□□□□□ -2
CCDC50Q8IVM0 SET-203ENST00000372688 801 ntTSL 2 BASIC2.54□□□□□ -2
CCDC50Q8IVM0 RNU6-217P-201ENST00000384164 104 ntBASIC2.54□□□□□ -2
CCDC50Q8IVM0 MIR483-201ENST00000385070 76 ntBASIC2.54□□□□□ -2
CCDC50Q8IVM0 AL590084.2-201ENST00000401481 382 ntBASIC2.54□□□□□ -2
CCDC50Q8IVM0 TXNP7-201ENST00000406296 293 ntBASIC2.54□□□□□ -2
CCDC50Q8IVM0 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC2.54□□□□□ -2
CCDC50Q8IVM0 MTCO1P17-201ENST00000411522 491 ntBASIC2.54□□□□□ -2
CCDC50Q8IVM0 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC2.54□□□□□ -2
CCDC50Q8IVM0 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC2.54□□□□□ -2
CCDC50Q8IVM0 AL451054.2-201ENST00000420896 202 ntBASIC2.54□□□□□ -2
CCDC50Q8IVM0 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC2.54□□□□□ -2
CCDC50Q8IVM0 LINC01828-202ENST00000450294 955 ntTSL 5 BASIC2.54□□□□□ -2
CCDC50Q8IVM0 GJE1-201ENST00000450456 916 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
CCDC50Q8IVM0 AC108938.1-201ENST00000451204 136 ntBASIC2.54□□□□□ -2
CCDC50Q8IVM0 AL008723.1-201ENST00000452181 590 ntTSL 5 BASIC2.54□□□□□ -2
CCDC50Q8IVM0 RPL12P25-201ENST00000455592 494 ntBASIC2.54□□□□□ -2
CCDC50Q8IVM0 C1orf185-202ENST00000467127 747 ntAPPRIS ALT2 TSL 3 BASIC2.54□□□□□ -2
CCDC50Q8IVM0 PRR16-204ENST00000505123 1298 ntTSL 3 BASIC2.54□□□□□ -2
CCDC50Q8IVM0 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC2.54□□□□□ -2
CCDC50Q8IVM0 AC104803.1-201ENST00000506917 529 ntTSL 3 BASIC2.54□□□□□ -2
CCDC50Q8IVM0 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC2.54□□□□□ -2
CCDC50Q8IVM0 LINC02465-202ENST00000508724 503 ntTSL 3 BASIC2.54□□□□□ -2
CCDC50Q8IVM0 AC008716.1-201ENST00000511084 513 ntBASIC2.54□□□□□ -2
CCDC50Q8IVM0 RNU1-104P-201ENST00000517280 175 ntBASIC2.54□□□□□ -2
CCDC50Q8IVM0 ZFPM2-AS1-207ENST00000524045 987 ntTSL 3 BASIC2.54□□□□□ -2
CCDC50Q8IVM0 AL391261.3-201ENST00000557194 520 ntBASIC2.54□□□□□ -2
CCDC50Q8IVM0 AL031716.1-201ENST00000569106 530 ntTSL 5 BASIC2.54□□□□□ -2
CCDC50Q8IVM0 AF038458.1-201ENST00000588406 262 ntBASIC2.54□□□□□ -2
CCDC50Q8IVM0 AC021171.1-201ENST00000603137 706 ntBASIC2.54□□□□□ -2
CCDC50Q8IVM0 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC2.54□□□□□ -2
CCDC50Q8IVM0 DLEU1_1.1-201ENST00000618107 190 ntBASIC2.54□□□□□ -2
CCDC50Q8IVM0 UCA1.1-201ENST00000620952 75 ntBASIC2.54□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 102.8 ms