Protein–RNA interactions for Protein: Q8IVD9

NUDCD3, NudC domain-containing protein 3, humanhuman

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3Q8IVD9 AP003467.2-201ENST00000520175 319 ntBASIC2.43□□□□□ -2.02
NUDCD3Q8IVD9 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC2.43□□□□□ -2.02
NUDCD3Q8IVD9 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC2.43□□□□□ -2.02
NUDCD3Q8IVD9 AC087241.2-201ENST00000535801 324 ntBASIC2.43□□□□□ -2.02
NUDCD3Q8IVD9 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC2.43□□□□□ -2.02
NUDCD3Q8IVD9 AC008147.1-201ENST00000551284 325 ntTSL 3 BASIC2.43□□□□□ -2.02
NUDCD3Q8IVD9 AL391261.3-201ENST00000557194 520 ntBASIC2.43□□□□□ -2.02
NUDCD3Q8IVD9 AL356022.1-201ENST00000557465 483 ntTSL 5 BASIC2.43□□□□□ -2.02
NUDCD3Q8IVD9 MIR4658-201ENST00000584344 65 ntBASIC2.43□□□□□ -2.02
NUDCD3Q8IVD9 AF038458.1-201ENST00000588406 262 ntBASIC2.43□□□□□ -2.02
NUDCD3Q8IVD9 AC092296.3-201ENST00000589968 249 ntTSL 3 BASIC2.43□□□□□ -2.02
NUDCD3Q8IVD9 AC002545.1-201ENST00000592511 181 ntBASIC2.43□□□□□ -2.02
NUDCD3Q8IVD9 AC022145.1-201ENST00000600673 383 ntTSL 3 BASIC2.43□□□□□ -2.02
NUDCD3Q8IVD9 AL161729.4-201ENST00000604650 476 ntBASIC2.43□□□□□ -2.02
NUDCD3Q8IVD9 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC2.43□□□□□ -2.02
NUDCD3Q8IVD9 AC013470.4-201ENST00000619978 986 ntBASIC2.43□□□□□ -2.02
NUDCD3Q8IVD9 AL591441.2-201ENST00000620059 535 ntTSL 5 BASIC2.43□□□□□ -2.02
NUDCD3Q8IVD9 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC2.43□□□□□ -2.02
NUDCD3Q8IVD9 AL137790.1-201ENST00000634283 177 ntBASIC2.43□□□□□ -2.02
NUDCD3Q8IVD9 PCMTD1P7-201ENST00000634506 357 ntBASIC2.43□□□□□ -2.02
NUDCD3Q8IVD9 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC2.43□□□□□ -2.02
NUDCD3Q8IVD9 ZNF833P-201ENST00000424938 1494 ntBASIC2.43□□□□□ -2.02
NUDCD3Q8IVD9 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC2.43□□□□□ -2.02
NUDCD3Q8IVD9 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
NUDCD3Q8IVD9 AL359693.1-201ENST00000614959 2407 ntBASIC2.42□□□□□ -2.02
NUDCD3Q8IVD9 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC2.42□□□□□ -2.02
NUDCD3Q8IVD9 FTLP6-201ENST00000355274 422 ntBASIC2.42□□□□□ -2.02
NUDCD3Q8IVD9 SNORA68.1-201ENST00000364537 132 ntBASIC2.42□□□□□ -2.02
NUDCD3Q8IVD9 RNU6-140P-201ENST00000384566 108 ntBASIC2.42□□□□□ -2.02
NUDCD3Q8IVD9 AL360182.1-201ENST00000397433 468 ntBASIC2.42□□□□□ -2.02
NUDCD3Q8IVD9 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC2.42□□□□□ -2.02
NUDCD3Q8IVD9 RN7SKP266-201ENST00000410232 287 ntBASIC2.42□□□□□ -2.02
NUDCD3Q8IVD9 AL513331.1-201ENST00000411908 397 ntBASIC2.42□□□□□ -2.02
NUDCD3Q8IVD9 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC2.42□□□□□ -2.02
NUDCD3Q8IVD9 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC2.42□□□□□ -2.02
NUDCD3Q8IVD9 ZNF863P-201ENST00000426746 417 ntBASIC2.42□□□□□ -2.02
NUDCD3Q8IVD9 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC2.42□□□□□ -2.02
NUDCD3Q8IVD9 GTF2IP20-201ENST00000431663 360 ntBASIC2.42□□□□□ -2.02
NUDCD3Q8IVD9 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC2.42□□□□□ -2.02
NUDCD3Q8IVD9 RPL23AP83-201ENST00000434984 473 ntBASIC2.42□□□□□ -2.02
NUDCD3Q8IVD9 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC2.42□□□□□ -2.02
NUDCD3Q8IVD9 LINC01075-201ENST00000455977 370 ntTSL 3 BASIC2.42□□□□□ -2.02
NUDCD3Q8IVD9 DUXAP8-207ENST00000456786 622 ntBASIC2.42□□□□□ -2.02
NUDCD3Q8IVD9 AC034222.1-201ENST00000494052 532 ntBASIC2.42□□□□□ -2.02
NUDCD3Q8IVD9 SUMO2P6-201ENST00000505273 288 ntBASIC2.42□□□□□ -2.02
NUDCD3Q8IVD9 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC2.42□□□□□ -2.02
NUDCD3Q8IVD9 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC2.42□□□□□ -2.02
NUDCD3Q8IVD9 LINC02465-202ENST00000508724 503 ntTSL 3 BASIC2.42□□□□□ -2.02
NUDCD3Q8IVD9 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC2.42□□□□□ -2.02
NUDCD3Q8IVD9 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC2.42□□□□□ -2.02
NUDCD3Q8IVD9 RNA5SP216-201ENST00000516111 123 ntBASIC2.42□□□□□ -2.02
NUDCD3Q8IVD9 AC107909.2-201ENST00000520844 493 ntTSL 3 BASIC2.42□□□□□ -2.02
NUDCD3Q8IVD9 APAF1-207ENST00000547743 651 ntTSL 3 BASIC2.42□□□□□ -2.02
NUDCD3Q8IVD9 MYL12BP1-201ENST00000569826 507 ntBASIC2.42□□□□□ -2.02
NUDCD3Q8IVD9 MIR3117-201ENST00000584034 78 ntBASIC2.42□□□□□ -2.02
NUDCD3Q8IVD9 HMGN2P15-201ENST00000585707 270 ntBASIC2.42□□□□□ -2.02
NUDCD3Q8IVD9 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC2.42□□□□□ -2.02
NUDCD3Q8IVD9 AC011471.1-201ENST00000585766 187 ntBASIC2.42□□□□□ -2.02
NUDCD3Q8IVD9 NRBF2P5-201ENST00000603087 788 ntBASIC2.42□□□□□ -2.02
NUDCD3Q8IVD9 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC2.42□□□□□ -2.02
NUDCD3Q8IVD9 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC2.42□□□□□ -2.02
NUDCD3Q8IVD9 PCF11-AS1-201ENST00000602322 1516 ntBASIC2.42□□□□□ -2.02
NUDCD3Q8IVD9 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC2.42□□□□□ -2.02
NUDCD3Q8IVD9 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.41□□□□□ -2.02
NUDCD3Q8IVD9 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.41□□□□□ -2.02
NUDCD3Q8IVD9 MIR483-201ENST00000385070 76 ntBASIC2.41□□□□□ -2.02
NUDCD3Q8IVD9 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
NUDCD3Q8IVD9 AC007064.1-201ENST00000412238 351 ntBASIC2.41□□□□□ -2.02
NUDCD3Q8IVD9 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC2.41□□□□□ -2.02
NUDCD3Q8IVD9 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC2.41□□□□□ -2.02
NUDCD3Q8IVD9 AL445669.1-201ENST00000426743 755 ntBASIC2.41□□□□□ -2.02
NUDCD3Q8IVD9 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC2.41□□□□□ -2.02
NUDCD3Q8IVD9 GSAP-208ENST00000441833 737 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
NUDCD3Q8IVD9 MTCO3P45-201ENST00000443036 613 ntBASIC2.41□□□□□ -2.02
NUDCD3Q8IVD9 AC011825.1-201ENST00000484967 388 ntBASIC2.41□□□□□ -2.02
NUDCD3Q8IVD9 AC080014.1-201ENST00000496877 1201 ntBASIC2.41□□□□□ -2.02
NUDCD3Q8IVD9 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC2.41□□□□□ -2.02
NUDCD3Q8IVD9 AC091951.3-201ENST00000504093 246 ntBASIC2.41□□□□□ -2.02
NUDCD3Q8IVD9 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC2.41□□□□□ -2.02
NUDCD3Q8IVD9 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC2.41□□□□□ -2.02
NUDCD3Q8IVD9 AC113155.1-201ENST00000511141 769 ntBASIC2.41□□□□□ -2.02
NUDCD3Q8IVD9 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC2.41□□□□□ -2.02
NUDCD3Q8IVD9 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC2.41□□□□□ -2.02
NUDCD3Q8IVD9 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC2.41□□□□□ -2.02
NUDCD3Q8IVD9 IAPP-204ENST00000539393 409 ntAPPRIS P1 TSL 2 BASIC2.41□□□□□ -2.02
NUDCD3Q8IVD9 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.41□□□□□ -2.02
NUDCD3Q8IVD9 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC2.41□□□□□ -2.02
NUDCD3Q8IVD9 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC2.41□□□□□ -2.02
NUDCD3Q8IVD9 AC018554.1-201ENST00000565506 800 ntTSL 2 BASIC2.41□□□□□ -2.02
NUDCD3Q8IVD9 AL031716.1-201ENST00000569106 530 ntTSL 5 BASIC2.41□□□□□ -2.02
NUDCD3Q8IVD9 MIR3200-201ENST00000580767 85 ntBASIC2.41□□□□□ -2.02
NUDCD3Q8IVD9 AC061975.8-201ENST00000587058 721 ntBASIC2.41□□□□□ -2.02
NUDCD3Q8IVD9 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC2.41□□□□□ -2.02
NUDCD3Q8IVD9 VN1R82P-201ENST00000601481 356 ntBASIC2.41□□□□□ -2.02
NUDCD3Q8IVD9 AC136601.2-201ENST00000604356 474 ntBASIC2.41□□□□□ -2.02
NUDCD3Q8IVD9 AL136370.1-201ENST00000608166 691 ntBASIC2.41□□□□□ -2.02
NUDCD3Q8IVD9 AC079395.3-201ENST00000615161 484 ntBASIC2.41□□□□□ -2.02
NUDCD3Q8IVD9 AC112204.3-201ENST00000623822 332 ntBASIC2.41□□□□□ -2.02
NUDCD3Q8IVD9 AP003399.1-201ENST00000637534 361 ntBASIC2.41□□□□□ -2.02
NUDCD3Q8IVD9 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 97 ms