Protein–RNA interactions for Protein: Q8IV63

VRK3, Inactive serine/threonine-protein kinase VRK3, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3Q8IV63 RPS27AP12-201ENST00000429552 465 ntBASIC3.92□□□□□ -1.78
VRK3Q8IV63 CBX3P6-201ENST00000430257 527 ntBASIC3.92□□□□□ -1.78
VRK3Q8IV63 AC005019.1-201ENST00000436455 431 ntBASIC3.92□□□□□ -1.78
VRK3Q8IV63 AL353748.1-201ENST00000440753 474 ntBASIC3.92□□□□□ -1.78
VRK3Q8IV63 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC3.92□□□□□ -1.78
VRK3Q8IV63 GAS5-223ENST00000452197 483 ntTSL 3 BASIC3.92□□□□□ -1.78
VRK3Q8IV63 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC3.92□□□□□ -1.78
VRK3Q8IV63 AL132838.2-201ENST00000492041 314 ntBASIC3.92□□□□□ -1.78
VRK3Q8IV63 FTH1P24-201ENST00000503502 462 ntBASIC3.92□□□□□ -1.78
VRK3Q8IV63 COX7A2P2-201ENST00000505291 250 ntBASIC3.92□□□□□ -1.78
VRK3Q8IV63 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC3.92□□□□□ -1.78
VRK3Q8IV63 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC3.92□□□□□ -1.78
VRK3Q8IV63 AC005740.3-201ENST00000520882 344 ntTSL 2 BASIC3.92□□□□□ -1.78
VRK3Q8IV63 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC3.92□□□□□ -1.78
VRK3Q8IV63 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC3.92□□□□□ -1.78
VRK3Q8IV63 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC3.92□□□□□ -1.78
VRK3Q8IV63 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC3.92□□□□□ -1.78
VRK3Q8IV63 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC3.92□□□□□ -1.78
VRK3Q8IV63 AL139395.1-201ENST00000603662 160 ntBASIC3.92□□□□□ -1.78
VRK3Q8IV63 AC012409.4-201ENST00000612923 249 ntBASIC3.92□□□□□ -1.78
VRK3Q8IV63 AC025034.2-201ENST00000623264 286 ntBASIC3.92□□□□□ -1.78
VRK3Q8IV63 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC3.92□□□□□ -1.78
VRK3Q8IV63 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC3.92□□□□□ -1.78
VRK3Q8IV63 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC3.92□□□□□ -1.78
VRK3Q8IV63 API5P2-201ENST00000397055 1498 ntBASIC3.92□□□□□ -1.78
VRK3Q8IV63 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
VRK3Q8IV63 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC3.91□□□□□ -1.78
VRK3Q8IV63 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
VRK3Q8IV63 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
VRK3Q8IV63 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC3.91□□□□□ -1.78
VRK3Q8IV63 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
VRK3Q8IV63 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
VRK3Q8IV63 RNU6-1252P-201ENST00000363054 104 ntBASIC3.91□□□□□ -1.78
VRK3Q8IV63 Y_RNA.149-201ENST00000363558 117 ntBASIC3.91□□□□□ -1.78
VRK3Q8IV63 RNU6-178P-201ENST00000384631 104 ntBASIC3.91□□□□□ -1.78
VRK3Q8IV63 Y_RNA.576-201ENST00000384781 102 ntBASIC3.91□□□□□ -1.78
VRK3Q8IV63 SOD2P1-201ENST00000396543 562 ntBASIC3.91□□□□□ -1.78
VRK3Q8IV63 SNORA3C-201ENST00000408792 125 ntBASIC3.91□□□□□ -1.78
VRK3Q8IV63 RNU2-36P-201ENST00000410361 191 ntBASIC3.91□□□□□ -1.78
VRK3Q8IV63 Y_RNA.646-201ENST00000410980 101 ntBASIC3.91□□□□□ -1.78
VRK3Q8IV63 HMGB3P2-201ENST00000411913 584 ntBASIC3.91□□□□□ -1.78
VRK3Q8IV63 AL691449.1-201ENST00000426570 421 ntBASIC3.91□□□□□ -1.78
VRK3Q8IV63 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC3.91□□□□□ -1.78
VRK3Q8IV63 AC127537.2-201ENST00000439258 465 ntBASIC3.91□□□□□ -1.78
VRK3Q8IV63 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC3.91□□□□□ -1.78
VRK3Q8IV63 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC3.91□□□□□ -1.78
VRK3Q8IV63 AC103987.1-201ENST00000473394 348 ntBASIC3.91□□□□□ -1.78
VRK3Q8IV63 RN7SL283P-201ENST00000489055 303 ntBASIC3.91□□□□□ -1.78
VRK3Q8IV63 MEPE-206ENST00000511670 550 ntTSL 4 BASIC3.91□□□□□ -1.78
VRK3Q8IV63 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC3.91□□□□□ -1.78
VRK3Q8IV63 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC3.91□□□□□ -1.78
VRK3Q8IV63 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC3.91□□□□□ -1.78
VRK3Q8IV63 RNU6-764P-201ENST00000516396 105 ntBASIC3.91□□□□□ -1.78
VRK3Q8IV63 RNU6-264P-201ENST00000517134 104 ntBASIC3.91□□□□□ -1.78
VRK3Q8IV63 IGLVIV-53-201ENST00000520107 367 ntBASIC3.91□□□□□ -1.78
VRK3Q8IV63 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC3.91□□□□□ -1.78
VRK3Q8IV63 AP000763.2-201ENST00000540641 163 ntBASIC3.91□□□□□ -1.78
VRK3Q8IV63 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC3.91□□□□□ -1.78
VRK3Q8IV63 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
VRK3Q8IV63 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
VRK3Q8IV63 AC008269.2-201ENST00000561915 1105 ntBASIC3.91□□□□□ -1.78
VRK3Q8IV63 MIR4697-201ENST00000582977 78 ntBASIC3.91□□□□□ -1.78
VRK3Q8IV63 MIR4293-201ENST00000584305 78 ntBASIC3.91□□□□□ -1.78
VRK3Q8IV63 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC3.91□□□□□ -1.78
VRK3Q8IV63 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC3.91□□□□□ -1.78
VRK3Q8IV63 AC012443.1-201ENST00000605605 231 ntBASIC3.91□□□□□ -1.78
VRK3Q8IV63 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC3.91□□□□□ -1.78
VRK3Q8IV63 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC3.91□□□□□ -1.78
VRK3Q8IV63 AL138726.1-201ENST00000614873 333 ntBASIC3.91□□□□□ -1.78
VRK3Q8IV63 AL590099.1-201ENST00000615276 138 ntBASIC3.91□□□□□ -1.78
VRK3Q8IV63 Z69720.2-201ENST00000624755 279 ntBASIC3.91□□□□□ -1.78
VRK3Q8IV63 U6.114-201ENST00000636407 96 ntBASIC3.91□□□□□ -1.78
VRK3Q8IV63 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
VRK3Q8IV63 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC3.91□□□□□ -1.78
VRK3Q8IV63 HELLS-204ENST00000371332 2675 ntTSL 5 BASIC3.91□□□□□ -1.78
VRK3Q8IV63 ZNF519P1-201ENST00000449011 1626 ntBASIC3.91□□□□□ -1.78
VRK3Q8IV63 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
VRK3Q8IV63 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
VRK3Q8IV63 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC3.91□□□□□ -1.78
VRK3Q8IV63 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
VRK3Q8IV63 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC3.91□□□□□ -1.78
VRK3Q8IV63 OSBPL9P4-201ENST00000371707 1800 ntBASIC3.91□□□□□ -1.78
VRK3Q8IV63 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC3.91□□□□□ -1.78
VRK3Q8IV63 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC3.9□□□□□ -1.78
VRK3Q8IV63 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC3.9□□□□□ -1.78
VRK3Q8IV63 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC3.9□□□□□ -1.78
VRK3Q8IV63 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
VRK3Q8IV63 MTND5P30-201ENST00000452896 1731 ntBASIC3.9□□□□□ -1.78
VRK3Q8IV63 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
VRK3Q8IV63 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC3.9□□□□□ -1.78
VRK3Q8IV63 SNORD74.4-201ENST00000364129 80 ntBASIC3.9□□□□□ -1.79
VRK3Q8IV63 Y_RNA.252-201ENST00000364556 101 ntBASIC3.9□□□□□ -1.79
VRK3Q8IV63 RNU6-593P-201ENST00000364716 112 ntBASIC3.9□□□□□ -1.79
VRK3Q8IV63 RNA5SP283-201ENST00000365604 119 ntBASIC3.9□□□□□ -1.79
VRK3Q8IV63 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC3.9□□□□□ -1.79
VRK3Q8IV63 RNU6-328P-201ENST00000390887 106 ntBASIC3.9□□□□□ -1.79
VRK3Q8IV63 MIR1302-3-201ENST00000408128 138 ntBASIC3.9□□□□□ -1.79
VRK3Q8IV63 RNU2-15P-201ENST00000410692 191 ntBASIC3.9□□□□□ -1.79
VRK3Q8IV63 RNU4-46P-201ENST00000410818 138 ntBASIC3.9□□□□□ -1.79
VRK3Q8IV63 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC3.9□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 117.7 ms