Protein–RNA interactions for Protein: Q86U70

LDB1, LIM domain-binding protein 1, humanhuman

Predicted RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1Q86U70 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
LDB1Q86U70 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
LDB1Q86U70 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC3.16□□□□□ -1.9
LDB1Q86U70 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC3.16□□□□□ -1.9
LDB1Q86U70 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
LDB1Q86U70 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
LDB1Q86U70 HSPE1P11-201ENST00000339579 310 ntBASIC3.16□□□□□ -1.9
LDB1Q86U70 SNORD56.2-201ENST00000363242 71 ntBASIC3.16□□□□□ -1.9
LDB1Q86U70 RNU5E-6P-201ENST00000365574 115 ntBASIC3.16□□□□□ -1.9
LDB1Q86U70 RNVU1-14-201ENST00000384770 164 ntBASIC3.16□□□□□ -1.9
LDB1Q86U70 MIR34B-201ENST00000385076 84 ntBASIC3.16□□□□□ -1.9
LDB1Q86U70 RNU6-1077P-201ENST00000410506 102 ntBASIC3.16□□□□□ -1.9
LDB1Q86U70 RNA5SP38-201ENST00000410750 119 ntBASIC3.16□□□□□ -1.9
LDB1Q86U70 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
LDB1Q86U70 BTF3L4P1-201ENST00000413813 468 ntBASIC3.16□□□□□ -1.9
LDB1Q86U70 CDK8P2-201ENST00000415020 547 ntBASIC3.16□□□□□ -1.9
LDB1Q86U70 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC3.16□□□□□ -1.9
LDB1Q86U70 ISCA1P6-201ENST00000427740 390 ntBASIC3.16□□□□□ -1.9
LDB1Q86U70 RPL23AP69-201ENST00000431134 458 ntBASIC3.16□□□□□ -1.9
LDB1Q86U70 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC3.16□□□□□ -1.9
LDB1Q86U70 AL512844.2-201ENST00000433990 593 ntBASIC3.16□□□□□ -1.9
LDB1Q86U70 AC104850.1-201ENST00000435940 476 ntBASIC3.16□□□□□ -1.9
LDB1Q86U70 AL353706.1-201ENST00000436728 494 ntBASIC3.16□□□□□ -1.9
LDB1Q86U70 Z82210.1-201ENST00000440037 231 ntBASIC3.16□□□□□ -1.9
LDB1Q86U70 AL031667.1-201ENST00000440222 725 ntBASIC3.16□□□□□ -1.9
LDB1Q86U70 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC3.16□□□□□ -1.9
LDB1Q86U70 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC3.16□□□□□ -1.9
LDB1Q86U70 AC013267.1-201ENST00000458227 267 ntBASIC3.16□□□□□ -1.9
LDB1Q86U70 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC3.16□□□□□ -1.9
LDB1Q86U70 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
LDB1Q86U70 LINC02113-201ENST00000510302 336 ntTSL 3 BASIC3.16□□□□□ -1.9
LDB1Q86U70 AC079140.3-201ENST00000511111 550 ntBASIC3.16□□□□□ -1.9
LDB1Q86U70 AC022447.1-201ENST00000515358 464 ntBASIC3.16□□□□□ -1.9
LDB1Q86U70 AC108467.1-201ENST00000515623 672 ntTSL 3 BASIC3.16□□□□□ -1.9
LDB1Q86U70 RNA5SP217-201ENST00000515959 91 ntBASIC3.16□□□□□ -1.9
LDB1Q86U70 RNU7-51P-201ENST00000516560 62 ntBASIC3.16□□□□□ -1.9
LDB1Q86U70 Vault.3-201ENST00000516676 95 ntBASIC3.16□□□□□ -1.9
LDB1Q86U70 AP001646.3-201ENST00000526305 446 ntTSL 2 BASIC3.16□□□□□ -1.9
LDB1Q86U70 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC3.16□□□□□ -1.9
LDB1Q86U70 AC024909.2-201ENST00000553035 286 ntBASIC3.16□□□□□ -1.9
LDB1Q86U70 MIR3609-201ENST00000582661 80 ntBASIC3.16□□□□□ -1.9
LDB1Q86U70 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC3.16□□□□□ -1.9
LDB1Q86U70 SRGNP1-201ENST00000603392 451 ntBASIC3.16□□□□□ -1.9
LDB1Q86U70 AC015871.2-201ENST00000603605 948 ntBASIC3.16□□□□□ -1.9
LDB1Q86U70 DPPA3P3-201ENST00000603842 430 ntBASIC3.16□□□□□ -1.9
LDB1Q86U70 HSPE1P7-201ENST00000604681 321 ntBASIC3.16□□□□□ -1.9
LDB1Q86U70 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC3.16□□□□□ -1.9
LDB1Q86U70 AC009509.4-201ENST00000619202 509 ntBASIC3.16□□□□□ -1.9
LDB1Q86U70 MTND1P37-201ENST00000636562 264 ntBASIC3.16□□□□□ -1.9
LDB1Q86U70 PSMD5-AS1-215ENST00000640622 205 ntBASIC3.16□□□□□ -1.9
LDB1Q86U70 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.16□□□□□ -1.9
LDB1Q86U70 SNORA20.2-201ENST00000383922 131 ntBASIC3.15□□□□□ -1.91
LDB1Q86U70 RNU6-701P-201ENST00000384059 107 ntBASIC3.15□□□□□ -1.91
LDB1Q86U70 RNU6-348P-201ENST00000384386 107 ntBASIC3.15□□□□□ -1.91
LDB1Q86U70 RPS3AP36-201ENST00000398190 775 ntBASIC3.15□□□□□ -1.91
LDB1Q86U70 ERMN-204ENST00000409925 556 ntTSL 4 BASIC3.15□□□□□ -1.91
LDB1Q86U70 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
LDB1Q86U70 RNU2-33P-201ENST00000410344 192 ntBASIC3.15□□□□□ -1.91
LDB1Q86U70 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC3.15□□□□□ -1.91
LDB1Q86U70 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC3.15□□□□□ -1.91
LDB1Q86U70 C1DP2-201ENST00000418167 426 ntBASIC3.15□□□□□ -1.91
LDB1Q86U70 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC3.15□□□□□ -1.91
LDB1Q86U70 AC005326.1-201ENST00000429197 123 ntBASIC3.15□□□□□ -1.91
LDB1Q86U70 AC007919.1-201ENST00000429380 217 ntBASIC3.15□□□□□ -1.91
LDB1Q86U70 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC3.15□□□□□ -1.91
LDB1Q86U70 ARPC3P1-201ENST00000437218 533 ntBASIC3.15□□□□□ -1.91
LDB1Q86U70 SNRPGP6-201ENST00000451124 220 ntBASIC3.15□□□□□ -1.91
LDB1Q86U70 RGS5-217ENST00000451759 835 ntTSL 3 BASIC3.15□□□□□ -1.91
LDB1Q86U70 AC087588.1-201ENST00000462203 316 ntBASIC3.15□□□□□ -1.91
LDB1Q86U70 HMGN2P13-201ENST00000476476 274 ntBASIC3.15□□□□□ -1.91
LDB1Q86U70 AL135752.1-201ENST00000479477 471 ntBASIC3.15□□□□□ -1.91
LDB1Q86U70 AC074250.1-201ENST00000511117 192 ntBASIC3.15□□□□□ -1.91
LDB1Q86U70 SNORA31.1-201ENST00000515993 133 ntBASIC3.15□□□□□ -1.91
LDB1Q86U70 SNORA31.5-201ENST00000516190 133 ntBASIC3.15□□□□□ -1.91
LDB1Q86U70 RNU6-1092P-201ENST00000516955 87 ntBASIC3.15□□□□□ -1.91
LDB1Q86U70 AP002963.1-201ENST00000530590 184 ntBASIC3.15□□□□□ -1.91
LDB1Q86U70 ARL1-211ENST00000551828 776 ntTSL 5 BASIC3.15□□□□□ -1.91
LDB1Q86U70 TRAV37-201ENST00000553906 342 ntBASIC3.15□□□□□ -1.91
LDB1Q86U70 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC3.15□□□□□ -1.91
LDB1Q86U70 HMGB1P14-201ENST00000557424 591 ntBASIC3.15□□□□□ -1.91
LDB1Q86U70 AC034105.3-201ENST00000565294 442 ntBASIC3.15□□□□□ -1.91
LDB1Q86U70 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC3.15□□□□□ -1.91
LDB1Q86U70 MIR4528-201ENST00000577763 90 ntBASIC3.15□□□□□ -1.91
LDB1Q86U70 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC3.15□□□□□ -1.91
LDB1Q86U70 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC3.15□□□□□ -1.91
LDB1Q86U70 AL591516.1-201ENST00000611326 274 ntBASIC3.15□□□□□ -1.91
LDB1Q86U70 UBE2Q2P6-201ENST00000612666 153 ntBASIC3.15□□□□□ -1.91
LDB1Q86U70 VPS8-228ENST00000628962 207 ntTSL 5 BASIC3.15□□□□□ -1.91
LDB1Q86U70 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC3.15□□□□□ -1.91
LDB1Q86U70 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
LDB1Q86U70 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
LDB1Q86U70 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
LDB1Q86U70 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.15□□□□□ -1.91
LDB1Q86U70 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC3.14□□□□□ -1.91
LDB1Q86U70 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
LDB1Q86U70 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC3.14□□□□□ -1.91
LDB1Q86U70 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
LDB1Q86U70 RNA5SP383-201ENST00000362934 120 ntBASIC3.14□□□□□ -1.91
LDB1Q86U70 RNU6-960P-201ENST00000364056 120 ntBASIC3.14□□□□□ -1.91
LDB1Q86U70 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC3.14□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 118.2 ms