Protein–RNA interactions for Protein: Q7Z3B4

NUP54, Nucleoporin p54, humanhuman

Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54Q7Z3B4 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.1□□□□□ -1.91
NUP54Q7Z3B4 MTND5P7-201ENST00000413558 1798 ntBASIC3.1□□□□□ -1.91
NUP54Q7Z3B4 AL390237.1-201ENST00000404226 1415 ntBASIC3.1□□□□□ -1.91
NUP54Q7Z3B4 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
NUP54Q7Z3B4 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC3.09□□□□□ -1.91
NUP54Q7Z3B4 OR1S2-201ENST00000302592 978 ntBASIC3.09□□□□□ -1.91
NUP54Q7Z3B4 RNU6-270P-201ENST00000364131 105 ntBASIC3.09□□□□□ -1.91
NUP54Q7Z3B4 RNU4-40P-201ENST00000364351 143 ntBASIC3.09□□□□□ -1.91
NUP54Q7Z3B4 DYNLT3P1-201ENST00000378574 347 ntBASIC3.09□□□□□ -1.91
NUP54Q7Z3B4 MIR34B-201ENST00000385076 84 ntBASIC3.09□□□□□ -1.91
NUP54Q7Z3B4 RNU2-8P-201ENST00000410727 190 ntBASIC3.09□□□□□ -1.91
NUP54Q7Z3B4 RN7SKP140-201ENST00000411196 284 ntBASIC3.09□□□□□ -1.91
NUP54Q7Z3B4 AL513477.1-202ENST00000417061 214 ntBASIC3.09□□□□□ -1.91
NUP54Q7Z3B4 AL451054.2-201ENST00000420896 202 ntBASIC3.09□□□□□ -1.91
NUP54Q7Z3B4 AL365338.1-201ENST00000422282 858 ntBASIC3.09□□□□□ -1.91
NUP54Q7Z3B4 RPL31P12-201ENST00000422587 358 ntBASIC3.09□□□□□ -1.91
NUP54Q7Z3B4 OR2B8P-201ENST00000432841 938 ntBASIC3.09□□□□□ -1.91
NUP54Q7Z3B4 BX679664.1-201ENST00000434429 253 ntBASIC3.09□□□□□ -1.91
NUP54Q7Z3B4 MTND4P32-201ENST00000437189 1237 ntBASIC3.09□□□□□ -1.91
NUP54Q7Z3B4 AL714022.1-201ENST00000439897 151 ntBASIC3.09□□□□□ -1.91
NUP54Q7Z3B4 PIGFP3-201ENST00000441918 722 ntBASIC3.09□□□□□ -1.91
NUP54Q7Z3B4 GAPDHP27-201ENST00000447427 1020 ntBASIC3.09□□□□□ -1.91
NUP54Q7Z3B4 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC3.09□□□□□ -1.91
NUP54Q7Z3B4 RNU6-956P-201ENST00000458868 103 ntBASIC3.09□□□□□ -1.91
NUP54Q7Z3B4 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC3.09□□□□□ -1.91
NUP54Q7Z3B4 MTCO2P29-201ENST00000465212 189 ntBASIC3.09□□□□□ -1.91
NUP54Q7Z3B4 RPS20P22-201ENST00000473700 357 ntBASIC3.09□□□□□ -1.91
NUP54Q7Z3B4 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC3.09□□□□□ -1.91
NUP54Q7Z3B4 LARP1BP2-201ENST00000486594 519 ntBASIC3.09□□□□□ -1.91
NUP54Q7Z3B4 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC3.09□□□□□ -1.91
NUP54Q7Z3B4 RNU6-390P-201ENST00000516259 103 ntBASIC3.09□□□□□ -1.91
NUP54Q7Z3B4 AC026241.1-201ENST00000517873 2142 ntBASIC3.09□□□□□ -1.91
NUP54Q7Z3B4 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC3.09□□□□□ -1.91
NUP54Q7Z3B4 SUB1P1-201ENST00000524415 382 ntBASIC3.09□□□□□ -1.91
NUP54Q7Z3B4 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC3.09□□□□□ -1.91
NUP54Q7Z3B4 MIR3944-201ENST00000581277 108 ntBASIC3.09□□□□□ -1.91
NUP54Q7Z3B4 MIR3682-201ENST00000581338 84 ntBASIC3.09□□□□□ -1.91
NUP54Q7Z3B4 AC005498.1-201ENST00000592125 465 ntBASIC3.09□□□□□ -1.91
NUP54Q7Z3B4 AC078899.3-201ENST00000599065 212 ntBASIC3.09□□□□□ -1.91
NUP54Q7Z3B4 AC024220.1-201ENST00000603675 484 ntBASIC3.09□□□□□ -1.91
NUP54Q7Z3B4 AC080013.6-201ENST00000606185 215 ntBASIC3.09□□□□□ -1.91
NUP54Q7Z3B4 AC091304.9-201ENST00000612091 226 ntBASIC3.09□□□□□ -1.91
NUP54Q7Z3B4 AC008250.2-201ENST00000615261 205 ntBASIC3.09□□□□□ -1.91
NUP54Q7Z3B4 AP001506.1-201ENST00000615444 211 ntBASIC3.09□□□□□ -1.91
NUP54Q7Z3B4 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC3.09□□□□□ -1.91
NUP54Q7Z3B4 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.09□□□□□ -1.92
NUP54Q7Z3B4 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.09□□□□□ -1.92
NUP54Q7Z3B4 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC3.09□□□□□ -1.92
NUP54Q7Z3B4 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC3.08□□□□□ -1.92
NUP54Q7Z3B4 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC3.08□□□□□ -1.92
NUP54Q7Z3B4 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
NUP54Q7Z3B4 SNORD56.5-201ENST00000364281 72 ntBASIC3.08□□□□□ -1.92
NUP54Q7Z3B4 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
NUP54Q7Z3B4 AP002088.1-201ENST00000382740 395 ntBASIC3.08□□□□□ -1.92
NUP54Q7Z3B4 Y_RNA.553-201ENST00000384670 102 ntBASIC3.08□□□□□ -1.92
NUP54Q7Z3B4 AL513331.1-201ENST00000411908 397 ntBASIC3.08□□□□□ -1.92
NUP54Q7Z3B4 AC099548.1-201ENST00000421443 426 ntBASIC3.08□□□□□ -1.92
NUP54Q7Z3B4 AC092047.1-201ENST00000424997 240 ntBASIC3.08□□□□□ -1.92
NUP54Q7Z3B4 AL589872.1-201ENST00000426602 288 ntBASIC3.08□□□□□ -1.92
NUP54Q7Z3B4 AL360221.1-201ENST00000445989 335 ntBASIC3.08□□□□□ -1.92
NUP54Q7Z3B4 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC3.08□□□□□ -1.92
NUP54Q7Z3B4 MTND1P3-201ENST00000484956 952 ntBASIC3.08□□□□□ -1.92
NUP54Q7Z3B4 RPS27P26-201ENST00000494583 239 ntBASIC3.08□□□□□ -1.92
NUP54Q7Z3B4 AC010424.1-201ENST00000506336 297 ntBASIC3.08□□□□□ -1.92
NUP54Q7Z3B4 SEM1P1-201ENST00000506694 209 ntBASIC3.08□□□□□ -1.92
NUP54Q7Z3B4 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC3.08□□□□□ -1.92
NUP54Q7Z3B4 AC114797.1-201ENST00000514003 728 ntBASIC3.08□□□□□ -1.92
NUP54Q7Z3B4 MIR2276-201ENST00000516886 89 ntBASIC3.08□□□□□ -1.92
NUP54Q7Z3B4 AP002453.2-201ENST00000533503 320 ntBASIC3.08□□□□□ -1.92
NUP54Q7Z3B4 AC128657.1-201ENST00000549459 145 ntBASIC3.08□□□□□ -1.92
NUP54Q7Z3B4 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC3.08□□□□□ -1.92
NUP54Q7Z3B4 AC034105.3-201ENST00000565294 442 ntBASIC3.08□□□□□ -1.92
NUP54Q7Z3B4 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC3.08□□□□□ -1.92
NUP54Q7Z3B4 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC3.08□□□□□ -1.92
NUP54Q7Z3B4 MIR4276-201ENST00000584832 70 ntBASIC3.08□□□□□ -1.92
NUP54Q7Z3B4 AL451064.1-201ENST00000607718 471 ntBASIC3.08□□□□□ -1.92
NUP54Q7Z3B4 AC069200.1-201ENST00000609511 323 ntBASIC3.08□□□□□ -1.92
NUP54Q7Z3B4 UBE2Q2P2-203ENST00000613592 761 ntBASIC3.08□□□□□ -1.92
NUP54Q7Z3B4 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC3.08□□□□□ -1.92
NUP54Q7Z3B4 AC048344.4-201ENST00000619744 527 ntBASIC3.08□□□□□ -1.92
NUP54Q7Z3B4 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC3.08□□□□□ -1.92
NUP54Q7Z3B4 TEX21P-201ENST00000447107 1476 ntBASIC3.08□□□□□ -1.92
NUP54Q7Z3B4 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
NUP54Q7Z3B4 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
NUP54Q7Z3B4 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC3.07□□□□□ -1.92
NUP54Q7Z3B4 GNG5P1-201ENST00000255500 204 ntBASIC3.07□□□□□ -1.92
NUP54Q7Z3B4 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC3.07□□□□□ -1.92
NUP54Q7Z3B4 RNU4-1-201ENST00000363925 141 ntBASIC3.07□□□□□ -1.92
NUP54Q7Z3B4 RNU6-297P-201ENST00000384636 107 ntBASIC3.07□□□□□ -1.92
NUP54Q7Z3B4 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
NUP54Q7Z3B4 RPL23AP32-201ENST00000395315 459 ntBASIC3.07□□□□□ -1.92
NUP54Q7Z3B4 AL031121.1-201ENST00000406553 254 ntBASIC3.07□□□□□ -1.92
NUP54Q7Z3B4 BX323014.1-201ENST00000412876 237 ntBASIC3.07□□□□□ -1.92
NUP54Q7Z3B4 AL356968.1-201ENST00000416622 474 ntBASIC3.07□□□□□ -1.92
NUP54Q7Z3B4 RPS15AP12-201ENST00000419498 388 ntBASIC3.07□□□□□ -1.92
NUP54Q7Z3B4 AL358075.3-201ENST00000426289 226 ntBASIC3.07□□□□□ -1.92
NUP54Q7Z3B4 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC3.07□□□□□ -1.92
NUP54Q7Z3B4 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC3.07□□□□□ -1.92
NUP54Q7Z3B4 BNIP3P2-201ENST00000441221 577 ntBASIC3.07□□□□□ -1.92
NUP54Q7Z3B4 AL022238.1-201ENST00000442557 355 ntBASIC3.07□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 86.2 ms