Protein–RNA interactions for Protein: Q6ZV77

C9orf139, Uncharacterized protein C9orf139, humanhuman

Predictions only

Length 190 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf139Q6ZV77 AL049781.1-201ENST00000623195 3585 ntBASIC3.1□□□□□ -1.91
C9orf139Q6ZV77 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC3.09□□□□□ -1.91
C9orf139Q6ZV77 AC066616.2-201ENST00000559334 1481 ntBASIC3.09□□□□□ -1.91
C9orf139Q6ZV77 IDE-202ENST00000371581 4480 ntTSL 2 BASIC3.09□□□□□ -1.91
C9orf139Q6ZV77 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
C9orf139Q6ZV77 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC3.09□□□□□ -1.91
C9orf139Q6ZV77 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
C9orf139Q6ZV77 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC3.09□□□□□ -1.91
C9orf139Q6ZV77 BDP1P-201ENST00000582658 1990 ntBASIC3.09□□□□□ -1.91
C9orf139Q6ZV77 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
C9orf139Q6ZV77 AL139276.1-201ENST00000311910 1001 ntBASIC3.09□□□□□ -1.91
C9orf139Q6ZV77 RNU6-552P-201ENST00000362869 119 ntBASIC3.09□□□□□ -1.91
C9orf139Q6ZV77 RNU4-73P-201ENST00000363164 141 ntBASIC3.09□□□□□ -1.91
C9orf139Q6ZV77 Y_RNA.356-201ENST00000365475 113 ntBASIC3.09□□□□□ -1.91
C9orf139Q6ZV77 RNU6-1029P-201ENST00000384109 107 ntBASIC3.09□□□□□ -1.91
C9orf139Q6ZV77 UBE2V1P2-201ENST00000397758 440 ntBASIC3.09□□□□□ -1.91
C9orf139Q6ZV77 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.91
C9orf139Q6ZV77 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC3.09□□□□□ -1.91
C9orf139Q6ZV77 AL137014.1-201ENST00000420490 1226 ntBASIC3.09□□□□□ -1.91
C9orf139Q6ZV77 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC3.09□□□□□ -1.91
C9orf139Q6ZV77 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC3.09□□□□□ -1.91
C9orf139Q6ZV77 YME1L1P1-201ENST00000429435 297 ntBASIC3.09□□□□□ -1.91
C9orf139Q6ZV77 AC091286.1-201ENST00000431233 461 ntBASIC3.09□□□□□ -1.91
C9orf139Q6ZV77 RANP8-201ENST00000444720 713 ntBASIC3.09□□□□□ -1.91
C9orf139Q6ZV77 AL118520.1-201ENST00000450770 291 ntBASIC3.09□□□□□ -1.91
C9orf139Q6ZV77 AL162395.1-201ENST00000457882 422 ntBASIC3.09□□□□□ -1.91
C9orf139Q6ZV77 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC3.09□□□□□ -1.91
C9orf139Q6ZV77 HMGN2P26-201ENST00000463169 339 ntBASIC3.09□□□□□ -1.91
C9orf139Q6ZV77 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC3.09□□□□□ -1.91
C9orf139Q6ZV77 RNU6-1092P-201ENST00000516955 87 ntBASIC3.09□□□□□ -1.91
C9orf139Q6ZV77 NARSP2-201ENST00000518524 679 ntBASIC3.09□□□□□ -1.91
C9orf139Q6ZV77 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC3.09□□□□□ -1.91
C9orf139Q6ZV77 AC100870.1-201ENST00000522035 505 ntBASIC3.09□□□□□ -1.91
C9orf139Q6ZV77 AC109635.4-202ENST00000531666 412 ntBASIC3.09□□□□□ -1.91
C9orf139Q6ZV77 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
C9orf139Q6ZV77 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC3.09□□□□□ -1.91
C9orf139Q6ZV77 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC3.09□□□□□ -1.91
C9orf139Q6ZV77 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC3.09□□□□□ -1.91
C9orf139Q6ZV77 AC125611.2-201ENST00000551907 647 ntBASIC3.09□□□□□ -1.91
C9orf139Q6ZV77 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC3.09□□□□□ -1.91
C9orf139Q6ZV77 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC3.09□□□□□ -1.91
C9orf139Q6ZV77 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC3.09□□□□□ -1.91
C9orf139Q6ZV77 AL034351.1-201ENST00000605288 668 ntBASIC3.09□□□□□ -1.91
C9orf139Q6ZV77 AC012443.1-201ENST00000605605 231 ntBASIC3.09□□□□□ -1.91
C9orf139Q6ZV77 AC019176.2-201ENST00000611579 315 ntBASIC3.09□□□□□ -1.91
C9orf139Q6ZV77 AL450472.3-201ENST00000615578 367 ntBASIC3.09□□□□□ -1.91
C9orf139Q6ZV77 AL391261.4-201ENST00000616012 481 ntBASIC3.09□□□□□ -1.91
C9orf139Q6ZV77 AC009233.1-201ENST00000616477 371 ntBASIC3.09□□□□□ -1.91
C9orf139Q6ZV77 AL591424.2-201ENST00000617023 128 ntBASIC3.09□□□□□ -1.91
C9orf139Q6ZV77 MIR6130-201ENST00000619419 109 ntBASIC3.09□□□□□ -1.91
C9orf139Q6ZV77 AC011155.2-201ENST00000623202 216 ntBASIC3.09□□□□□ -1.91
C9orf139Q6ZV77 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC3.09□□□□□ -1.91
C9orf139Q6ZV77 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC3.09□□□□□ -1.91
C9orf139Q6ZV77 AC099654.10-201ENST00000640395 161 ntBASIC3.09□□□□□ -1.91
C9orf139Q6ZV77 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
C9orf139Q6ZV77 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC3.09□□□□□ -1.91
C9orf139Q6ZV77 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
C9orf139Q6ZV77 ZNF962P-201ENST00000443465 3140 ntBASIC3.09□□□□□ -1.92
C9orf139Q6ZV77 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC3.09□□□□□ -1.92
C9orf139Q6ZV77 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC3.09□□□□□ -1.92
C9orf139Q6ZV77 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC3.09□□□□□ -1.92
C9orf139Q6ZV77 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC3.09□□□□□ -1.92
C9orf139Q6ZV77 IPO8P1-201ENST00000455509 3109 ntBASIC3.08□□□□□ -1.92
C9orf139Q6ZV77 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC3.08□□□□□ -1.92
C9orf139Q6ZV77 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC3.08□□□□□ -1.92
C9orf139Q6ZV77 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC3.08□□□□□ -1.92
C9orf139Q6ZV77 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
C9orf139Q6ZV77 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
C9orf139Q6ZV77 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
C9orf139Q6ZV77 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC3.08□□□□□ -1.92
C9orf139Q6ZV77 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC3.08□□□□□ -1.92
C9orf139Q6ZV77 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC3.08□□□□□ -1.92
C9orf139Q6ZV77 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
C9orf139Q6ZV77 AC073343.1-201ENST00000328239 651 ntBASIC3.08□□□□□ -1.92
C9orf139Q6ZV77 RNU6-960P-201ENST00000364056 120 ntBASIC3.08□□□□□ -1.92
C9orf139Q6ZV77 SNORD46.1-201ENST00000364139 104 ntBASIC3.08□□□□□ -1.92
C9orf139Q6ZV77 SNORD6-201ENST00000365444 73 ntBASIC3.08□□□□□ -1.92
C9orf139Q6ZV77 SNORA70.4-201ENST00000365509 134 ntBASIC3.08□□□□□ -1.92
C9orf139Q6ZV77 SNORA24.1-201ENST00000384401 135 ntBASIC3.08□□□□□ -1.92
C9orf139Q6ZV77 Y_RNA.535-201ENST00000384612 99 ntBASIC3.08□□□□□ -1.92
C9orf139Q6ZV77 MIR514A2-201ENST00000385131 88 ntBASIC3.08□□□□□ -1.92
C9orf139Q6ZV77 MIR514A3-201ENST00000385132 88 ntBASIC3.08□□□□□ -1.92
C9orf139Q6ZV77 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
C9orf139Q6ZV77 MIR1183-201ENST00000408856 89 ntBASIC3.08□□□□□ -1.92
C9orf139Q6ZV77 RNU6-193P-201ENST00000410977 107 ntBASIC3.08□□□□□ -1.92
C9orf139Q6ZV77 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC3.08□□□□□ -1.92
C9orf139Q6ZV77 DUTP6-201ENST00000425573 462 ntBASIC3.08□□□□□ -1.92
C9orf139Q6ZV77 TAAR7P-201ENST00000436141 242 ntBASIC3.08□□□□□ -1.92
C9orf139Q6ZV77 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC3.08□□□□□ -1.92
C9orf139Q6ZV77 HMGB1P12-201ENST00000438594 598 ntBASIC3.08□□□□□ -1.92
C9orf139Q6ZV77 RPS24P6-201ENST00000452670 400 ntBASIC3.08□□□□□ -1.92
C9orf139Q6ZV77 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC3.08□□□□□ -1.92
C9orf139Q6ZV77 SNORD97-201ENST00000459187 142 ntBASIC3.08□□□□□ -1.92
C9orf139Q6ZV77 AC008481.1-201ENST00000463278 396 ntBASIC3.08□□□□□ -1.92
C9orf139Q6ZV77 AC010631.1-201ENST00000474150 156 ntBASIC3.08□□□□□ -1.92
C9orf139Q6ZV77 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC3.08□□□□□ -1.92
C9orf139Q6ZV77 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC3.08□□□□□ -1.92
C9orf139Q6ZV77 RPL31P61-201ENST00000496160 376 ntBASIC3.08□□□□□ -1.92
C9orf139Q6ZV77 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC3.08□□□□□ -1.92
C9orf139Q6ZV77 AC112206.3-201ENST00000514578 389 ntBASIC3.08□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 112.9 ms