Protein–RNA interactions for Protein: Q6ZNA4

RNF111, E3 ubiquitin-protein ligase Arkadia, humanhuman

Predictions only

Length 994 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF111Q6ZNA4 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC4.46□□□□□ -1.7
RNF111Q6ZNA4 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC4.46□□□□□ -1.7
RNF111Q6ZNA4 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC4.46□□□□□ -1.7
RNF111Q6ZNA4 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC4.46□□□□□ -1.7
RNF111Q6ZNA4 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
RNF111Q6ZNA4 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
RNF111Q6ZNA4 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC4.45□□□□□ -1.7
RNF111Q6ZNA4 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
RNF111Q6ZNA4 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC4.45□□□□□ -1.7
RNF111Q6ZNA4 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
RNF111Q6ZNA4 ZNF285B-201ENST00000561698 1767 ntBASIC4.45□□□□□ -1.7
RNF111Q6ZNA4 AC139769.1-204ENST00000472297 1931 ntBASIC4.45□□□□□ -1.7
RNF111Q6ZNA4 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
RNF111Q6ZNA4 RNU6-874P-201ENST00000362390 105 ntBASIC4.45□□□□□ -1.7
RNF111Q6ZNA4 Y_RNA.126-201ENST00000363382 111 ntBASIC4.45□□□□□ -1.7
RNF111Q6ZNA4 SNORD14.1-201ENST00000365609 90 ntBASIC4.45□□□□□ -1.7
RNF111Q6ZNA4 Y_RNA.447-201ENST00000384184 113 ntBASIC4.45□□□□□ -1.7
RNF111Q6ZNA4 RNU6-713P-201ENST00000384761 107 ntBASIC4.45□□□□□ -1.7
RNF111Q6ZNA4 MIR578-201ENST00000384828 96 ntBASIC4.45□□□□□ -1.7
RNF111Q6ZNA4 RNU6ATAC23P-201ENST00000408448 123 ntBASIC4.45□□□□□ -1.7
RNF111Q6ZNA4 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC4.45□□□□□ -1.7
RNF111Q6ZNA4 AC006369.1-201ENST00000419425 548 ntTSL 3 BASIC4.45□□□□□ -1.7
RNF111Q6ZNA4 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC4.45□□□□□ -1.7
RNF111Q6ZNA4 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC4.45□□□□□ -1.7
RNF111Q6ZNA4 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
RNF111Q6ZNA4 AL133396.1-201ENST00000432048 687 ntBASIC4.45□□□□□ -1.7
RNF111Q6ZNA4 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC4.45□□□□□ -1.7
RNF111Q6ZNA4 AL031274.1-201ENST00000450334 232 ntBASIC4.45□□□□□ -1.7
RNF111Q6ZNA4 CYP4F62P-203ENST00000455215 552 ntTSL 4 BASIC4.45□□□□□ -1.7
RNF111Q6ZNA4 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
RNF111Q6ZNA4 snoU13.3-201ENST00000459441 104 ntBASIC4.45□□□□□ -1.7
RNF111Q6ZNA4 RPS23P3-201ENST00000470993 430 ntBASIC4.45□□□□□ -1.7
RNF111Q6ZNA4 RPL31P60-201ENST00000478450 367 ntBASIC4.45□□□□□ -1.7
RNF111Q6ZNA4 AC008897.1-201ENST00000494006 347 ntBASIC4.45□□□□□ -1.7
RNF111Q6ZNA4 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC4.45□□□□□ -1.7
RNF111Q6ZNA4 RN7SKP276-201ENST00000516242 268 ntBASIC4.45□□□□□ -1.7
RNF111Q6ZNA4 RNU6-914P-201ENST00000516749 109 ntBASIC4.45□□□□□ -1.7
RNF111Q6ZNA4 HMGB3P26-201ENST00000560051 582 ntBASIC4.45□□□□□ -1.7
RNF111Q6ZNA4 AC091042.1-201ENST00000579213 173 ntBASIC4.45□□□□□ -1.7
RNF111Q6ZNA4 MIR4480-201ENST00000582492 71 ntBASIC4.45□□□□□ -1.7
RNF111Q6ZNA4 AL391358.1-201ENST00000605342 190 ntBASIC4.45□□□□□ -1.7
RNF111Q6ZNA4 MIR8062-201ENST00000621515 85 ntBASIC4.45□□□□□ -1.7
RNF111Q6ZNA4 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC4.45□□□□□ -1.7
RNF111Q6ZNA4 AMY2B-201ENST00000361355 2181 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
RNF111Q6ZNA4 MAPK10-320ENST00000641462 6696 ntBASIC4.45□□□□□ -1.7
RNF111Q6ZNA4 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC4.45□□□□□ -1.7
RNF111Q6ZNA4 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
RNF111Q6ZNA4 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC4.45□□□□□ -1.7
RNF111Q6ZNA4 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
RNF111Q6ZNA4 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
RNF111Q6ZNA4 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC4.44□□□□□ -1.7
RNF111Q6ZNA4 AC092329.3-201ENST00000611392 1904 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
RNF111Q6ZNA4 PRO1804-201ENST00000623780 2050 ntBASIC4.44□□□□□ -1.7
RNF111Q6ZNA4 MAPK10-303ENST00000641324 3959 ntBASIC4.44□□□□□ -1.7
RNF111Q6ZNA4 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC4.44□□□□□ -1.7
RNF111Q6ZNA4 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC4.44□□□□□ -1.7
RNF111Q6ZNA4 RNA5SP87-201ENST00000384155 118 ntBASIC4.44□□□□□ -1.7
RNF111Q6ZNA4 RNU6-790P-201ENST00000384479 105 ntBASIC4.44□□□□□ -1.7
RNF111Q6ZNA4 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
RNF111Q6ZNA4 AL445529.1-201ENST00000398713 389 ntBASIC4.44□□□□□ -1.7
RNF111Q6ZNA4 MIR1252-201ENST00000408861 65 ntBASIC4.44□□□□□ -1.7
RNF111Q6ZNA4 RN7SKP100-201ENST00000411258 284 ntBASIC4.44□□□□□ -1.7
RNF111Q6ZNA4 BX510359.2-201ENST00000417920 305 ntBASIC4.44□□□□□ -1.7
RNF111Q6ZNA4 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC4.44□□□□□ -1.7
RNF111Q6ZNA4 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC4.44□□□□□ -1.7
RNF111Q6ZNA4 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC4.44□□□□□ -1.7
RNF111Q6ZNA4 AP000770.1-201ENST00000444123 583 ntTSL 5 BASIC4.44□□□□□ -1.7
RNF111Q6ZNA4 AL360271.2-201ENST00000447710 161 ntBASIC4.44□□□□□ -1.7
RNF111Q6ZNA4 CHEK2P4-201ENST00000450340 246 ntBASIC4.44□□□□□ -1.7
RNF111Q6ZNA4 RPL23AP65-201ENST00000475608 468 ntBASIC4.44□□□□□ -1.7
RNF111Q6ZNA4 AC091868.1-201ENST00000508746 304 ntBASIC4.44□□□□□ -1.7
RNF111Q6ZNA4 GMPSP1-201ENST00000514075 579 ntBASIC4.44□□□□□ -1.7
RNF111Q6ZNA4 RNA5SP154-201ENST00000516193 111 ntBASIC4.44□□□□□ -1.7
RNF111Q6ZNA4 SNORA31.22-201ENST00000517204 135 ntBASIC4.44□□□□□ -1.7
RNF111Q6ZNA4 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
RNF111Q6ZNA4 SNRPGP16-201ENST00000533275 226 ntBASIC4.44□□□□□ -1.7
RNF111Q6ZNA4 AC008250.1-201ENST00000539874 522 ntTSL 3 BASIC4.44□□□□□ -1.7
RNF111Q6ZNA4 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC4.44□□□□□ -1.7
RNF111Q6ZNA4 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC4.44□□□□□ -1.7
RNF111Q6ZNA4 AC093227.2-201ENST00000589357 285 ntBASIC4.44□□□□□ -1.7
RNF111Q6ZNA4 AC078899.3-201ENST00000599065 212 ntBASIC4.44□□□□□ -1.7
RNF111Q6ZNA4 Z98751.3-201ENST00000604447 521 ntBASIC4.44□□□□□ -1.7
RNF111Q6ZNA4 HMGN2P28-201ENST00000606102 262 ntBASIC4.44□□□□□ -1.7
RNF111Q6ZNA4 AC100827.5-201ENST00000615883 426 ntBASIC4.44□□□□□ -1.7
RNF111Q6ZNA4 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
RNF111Q6ZNA4 AP001005.3-201ENST00000622049 129 ntBASIC4.44□□□□□ -1.7
RNF111Q6ZNA4 MIR4275-201ENST00000636486 87 ntBASIC4.44□□□□□ -1.7
RNF111Q6ZNA4 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
RNF111Q6ZNA4 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC4.44□□□□□ -1.7
RNF111Q6ZNA4 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
RNF111Q6ZNA4 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
RNF111Q6ZNA4 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
RNF111Q6ZNA4 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
RNF111Q6ZNA4 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
RNF111Q6ZNA4 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC4.43□□□□□ -1.7
RNF111Q6ZNA4 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
RNF111Q6ZNA4 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC4.43□□□□□ -1.7
RNF111Q6ZNA4 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC4.43□□□□□ -1.7
RNF111Q6ZNA4 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
RNF111Q6ZNA4 MIR448-201ENST00000362131 111 ntBASIC4.43□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 143.1 ms