Protein–RNA interactions for Protein: Q6PEY1

TMEM88, Transmembrane protein 88, humanhuman

Predictions only

Length 159 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88Q6PEY1 AL671855.1-201ENST00000446875 1203 ntBASIC3.36□□□□□ -1.87
TMEM88Q6PEY1 AL136097.1-201ENST00000456945 913 ntBASIC3.36□□□□□ -1.87
TMEM88Q6PEY1 PMCHL2-203ENST00000457791 237 ntBASIC3.36□□□□□ -1.87
TMEM88Q6PEY1 RPL21P41-201ENST00000459863 264 ntBASIC3.36□□□□□ -1.87
TMEM88Q6PEY1 RN7SL354P-201ENST00000469282 294 ntBASIC3.36□□□□□ -1.87
TMEM88Q6PEY1 RPL23AP11-201ENST00000475260 469 ntBASIC3.36□□□□□ -1.87
TMEM88Q6PEY1 AL135752.1-201ENST00000479477 471 ntBASIC3.36□□□□□ -1.87
TMEM88Q6PEY1 RPL21P93-201ENST00000480465 489 ntBASIC3.36□□□□□ -1.87
TMEM88Q6PEY1 AC083904.1-201ENST00000487828 231 ntBASIC3.36□□□□□ -1.87
TMEM88Q6PEY1 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC3.36□□□□□ -1.87
TMEM88Q6PEY1 AC091868.1-201ENST00000508746 304 ntBASIC3.36□□□□□ -1.87
TMEM88Q6PEY1 AC091180.4-201ENST00000511322 245 ntTSL 2 BASIC3.36□□□□□ -1.87
TMEM88Q6PEY1 TBCAP3-201ENST00000512475 312 ntBASIC3.36□□□□□ -1.87
TMEM88Q6PEY1 LRRC34P2-201ENST00000514850 553 ntBASIC3.36□□□□□ -1.87
TMEM88Q6PEY1 Y_RNA.702-201ENST00000516843 96 ntBASIC3.36□□□□□ -1.87
TMEM88Q6PEY1 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC3.36□□□□□ -1.87
TMEM88Q6PEY1 AC044810.3-201ENST00000527565 589 ntTSL 3 BASIC3.36□□□□□ -1.87
TMEM88Q6PEY1 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC3.36□□□□□ -1.87
TMEM88Q6PEY1 LINC02327-203ENST00000550122 738 ntTSL 2 BASIC3.36□□□□□ -1.87
TMEM88Q6PEY1 AC104002.2-201ENST00000553919 318 ntTSL 5 BASIC3.36□□□□□ -1.87
TMEM88Q6PEY1 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC3.36□□□□□ -1.87
TMEM88Q6PEY1 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC3.36□□□□□ -1.87
TMEM88Q6PEY1 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC3.36□□□□□ -1.87
TMEM88Q6PEY1 AC011712.1-201ENST00000588959 234 ntBASIC3.36□□□□□ -1.87
TMEM88Q6PEY1 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC3.36□□□□□ -1.87
TMEM88Q6PEY1 AC092807.2-201ENST00000609367 243 ntBASIC3.36□□□□□ -1.87
TMEM88Q6PEY1 UBE2Q2P6-201ENST00000612666 153 ntBASIC3.36□□□□□ -1.87
TMEM88Q6PEY1 LINC00923-207ENST00000619015 505 ntTSL 5 BASIC3.36□□□□□ -1.87
TMEM88Q6PEY1 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC3.36□□□□□ -1.87
TMEM88Q6PEY1 AL136221.1-201ENST00000621449 509 ntBASIC3.36□□□□□ -1.87
TMEM88Q6PEY1 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.36□□□□□ -1.87
TMEM88Q6PEY1 AP004289.2-201ENST00000444413 1457 ntBASIC3.35□□□□□ -1.87
TMEM88Q6PEY1 LINC01419-201ENST00000522365 1521 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
TMEM88Q6PEY1 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
TMEM88Q6PEY1 RNVU1-6-201ENST00000364688 164 ntBASIC3.35□□□□□ -1.87
TMEM88Q6PEY1 RNU6-393P-201ENST00000384475 107 ntBASIC3.35□□□□□ -1.87
TMEM88Q6PEY1 SNORA37-201ENST00000384504 129 ntBASIC3.35□□□□□ -1.87
TMEM88Q6PEY1 SNORA16.2-201ENST00000390991 127 ntBASIC3.35□□□□□ -1.87
TMEM88Q6PEY1 AL592114.1-201ENST00000403842 483 ntBASIC3.35□□□□□ -1.87
TMEM88Q6PEY1 AL078595.1-201ENST00000404458 226 ntBASIC3.35□□□□□ -1.87
TMEM88Q6PEY1 AL591034.1-201ENST00000407447 340 ntBASIC3.35□□□□□ -1.87
TMEM88Q6PEY1 RSU1P3-201ENST00000412878 835 ntBASIC3.35□□□□□ -1.87
TMEM88Q6PEY1 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC3.35□□□□□ -1.87
TMEM88Q6PEY1 AL513185.2-201ENST00000425543 193 ntBASIC3.35□□□□□ -1.87
TMEM88Q6PEY1 MOBP-206ENST00000428261 561 ntAPPRIS ALT2 TSL 4 BASIC3.35□□□□□ -1.87
TMEM88Q6PEY1 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC3.35□□□□□ -1.87
TMEM88Q6PEY1 Z82210.1-201ENST00000440037 231 ntBASIC3.35□□□□□ -1.87
TMEM88Q6PEY1 USP9YP8-201ENST00000441913 500 ntBASIC3.35□□□□□ -1.87
TMEM88Q6PEY1 AC010486.1-201ENST00000511793 424 ntBASIC3.35□□□□□ -1.87
TMEM88Q6PEY1 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
TMEM88Q6PEY1 AC112206.3-201ENST00000514578 389 ntBASIC3.35□□□□□ -1.87
TMEM88Q6PEY1 Y_RNA.665-201ENST00000516177 98 ntBASIC3.35□□□□□ -1.87
TMEM88Q6PEY1 IGKV1-32-201ENST00000519290 311 ntBASIC3.35□□□□□ -1.87
TMEM88Q6PEY1 RPL7P20-201ENST00000520308 745 ntBASIC3.35□□□□□ -1.87
TMEM88Q6PEY1 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC3.35□□□□□ -1.87
TMEM88Q6PEY1 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC3.35□□□□□ -1.87
TMEM88Q6PEY1 ATP5F1P5-201ENST00000526403 760 ntBASIC3.35□□□□□ -1.87
TMEM88Q6PEY1 AC125603.1-201ENST00000552718 366 ntTSL 3 BASIC3.35□□□□□ -1.87
TMEM88Q6PEY1 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC3.35□□□□□ -1.87
TMEM88Q6PEY1 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC3.35□□□□□ -1.87
TMEM88Q6PEY1 BPIFA4P-203ENST00000603168 689 ntBASIC3.35□□□□□ -1.87
TMEM88Q6PEY1 AC092747.3-201ENST00000603769 301 ntBASIC3.35□□□□□ -1.87
TMEM88Q6PEY1 ATP1B3P1-201ENST00000605365 821 ntBASIC3.35□□□□□ -1.87
TMEM88Q6PEY1 RDM1-219ENST00000615378 542 ntTSL 3 BASIC3.35□□□□□ -1.87
TMEM88Q6PEY1 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC3.35□□□□□ -1.87
TMEM88Q6PEY1 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.35□□□□□ -1.87
TMEM88Q6PEY1 PLCE1P1-201ENST00000622094 305 ntBASIC3.35□□□□□ -1.87
TMEM88Q6PEY1 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC3.35□□□□□ -1.87
TMEM88Q6PEY1 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC3.35□□□□□ -1.87
TMEM88Q6PEY1 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC3.35□□□□□ -1.87
TMEM88Q6PEY1 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
TMEM88Q6PEY1 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC3.35□□□□□ -1.87
TMEM88Q6PEY1 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
TMEM88Q6PEY1 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC3.35□□□□□ -1.87
TMEM88Q6PEY1 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
TMEM88Q6PEY1 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
TMEM88Q6PEY1 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC3.34□□□□□ -1.87
TMEM88Q6PEY1 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
TMEM88Q6PEY1 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
TMEM88Q6PEY1 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.34□□□□□ -1.87
TMEM88Q6PEY1 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
TMEM88Q6PEY1 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
TMEM88Q6PEY1 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC3.34□□□□□ -1.87
TMEM88Q6PEY1 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
TMEM88Q6PEY1 CBX3P1-201ENST00000325243 554 ntBASIC3.34□□□□□ -1.87
TMEM88Q6PEY1 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC3.34□□□□□ -1.87
TMEM88Q6PEY1 RNU6-522P-201ENST00000364497 107 ntBASIC3.34□□□□□ -1.87
TMEM88Q6PEY1 Y_RNA.279-201ENST00000364763 95 ntBASIC3.34□□□□□ -1.87
TMEM88Q6PEY1 RNU6-398P-201ENST00000384143 109 ntBASIC3.34□□□□□ -1.87
TMEM88Q6PEY1 MIR578-201ENST00000384828 96 ntBASIC3.34□□□□□ -1.87
TMEM88Q6PEY1 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
TMEM88Q6PEY1 RNA5SP219-201ENST00000390940 113 ntBASIC3.34□□□□□ -1.87
TMEM88Q6PEY1 RPS4XP9-201ENST00000405151 780 ntBASIC3.34□□□□□ -1.87
TMEM88Q6PEY1 RN7SKP106-201ENST00000410832 272 ntBASIC3.34□□□□□ -1.87
TMEM88Q6PEY1 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
TMEM88Q6PEY1 AC079790.1-201ENST00000420365 507 ntTSL 3 BASIC3.34□□□□□ -1.87
TMEM88Q6PEY1 AC245028.1-201ENST00000423259 256 ntBASIC3.34□□□□□ -1.87
TMEM88Q6PEY1 TMEM167AP1-201ENST00000423409 219 ntBASIC3.34□□□□□ -1.87
TMEM88Q6PEY1 AL669831.1-202ENST00000428504 417 ntBASIC3.34□□□□□ -1.87
TMEM88Q6PEY1 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC3.34□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 100.8 ms