Protein–RNA interactions for Protein: Q5BJE1

CCDC178, Coiled-coil domain-containing protein 178, humanhuman

Predictions only

Length 867 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC178Q5BJE1 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC4.35□□□□□ -1.71
CCDC178Q5BJE1 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC4.35□□□□□ -1.71
CCDC178Q5BJE1 AC037471.2-201ENST00000564941 598 ntBASIC4.35□□□□□ -1.71
CCDC178Q5BJE1 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC4.35□□□□□ -1.71
CCDC178Q5BJE1 MIR4775-201ENST00000581168 75 ntBASIC4.35□□□□□ -1.71
CCDC178Q5BJE1 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC4.35□□□□□ -1.71
CCDC178Q5BJE1 HMGN2P28-201ENST00000606102 262 ntBASIC4.35□□□□□ -1.71
CCDC178Q5BJE1 TUG1_2.1-201ENST00000614234 87 ntBASIC4.35□□□□□ -1.71
CCDC178Q5BJE1 AL121772.2-201ENST00000614331 297 ntBASIC4.35□□□□□ -1.71
CCDC178Q5BJE1 RMST_7.1-201ENST00000621935 268 ntBASIC4.35□□□□□ -1.71
CCDC178Q5BJE1 CR392039.5-201ENST00000623201 510 ntBASIC4.35□□□□□ -1.71
CCDC178Q5BJE1 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC4.35□□□□□ -1.71
CCDC178Q5BJE1 MTND4P35-201ENST00000604257 1375 ntBASIC4.35□□□□□ -1.71
CCDC178Q5BJE1 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC4.35□□□□□ -1.71
CCDC178Q5BJE1 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
CCDC178Q5BJE1 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
CCDC178Q5BJE1 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
CCDC178Q5BJE1 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC4.35□□□□□ -1.71
CCDC178Q5BJE1 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC4.35□□□□□ -1.71
CCDC178Q5BJE1 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
CCDC178Q5BJE1 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC4.34□□□□□ -1.71
CCDC178Q5BJE1 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
CCDC178Q5BJE1 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
CCDC178Q5BJE1 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
CCDC178Q5BJE1 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
CCDC178Q5BJE1 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC4.34□□□□□ -1.71
CCDC178Q5BJE1 OTUD4P1-201ENST00000237841 3067 ntBASIC4.34□□□□□ -1.71
CCDC178Q5BJE1 RNU6-552P-201ENST00000362869 119 ntBASIC4.34□□□□□ -1.71
CCDC178Q5BJE1 RNU4-20P-201ENST00000365601 151 ntBASIC4.34□□□□□ -1.71
CCDC178Q5BJE1 RNU6-1011P-201ENST00000384668 107 ntBASIC4.34□□□□□ -1.71
CCDC178Q5BJE1 RNU6ATAC34P-201ENST00000408879 121 ntBASIC4.34□□□□□ -1.71
CCDC178Q5BJE1 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC4.34□□□□□ -1.71
CCDC178Q5BJE1 AC007390.1-201ENST00000415722 356 ntBASIC4.34□□□□□ -1.71
CCDC178Q5BJE1 RPS12P23-201ENST00000419579 400 ntBASIC4.34□□□□□ -1.71
CCDC178Q5BJE1 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC4.34□□□□□ -1.71
CCDC178Q5BJE1 AC099677.1-201ENST00000420575 175 ntBASIC4.34□□□□□ -1.71
CCDC178Q5BJE1 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
CCDC178Q5BJE1 MRPL50P4-201ENST00000446432 475 ntBASIC4.34□□□□□ -1.71
CCDC178Q5BJE1 RPS3AP46-201ENST00000448352 682 ntBASIC4.34□□□□□ -1.71
CCDC178Q5BJE1 AL162389.1-201ENST00000449233 177 ntBASIC4.34□□□□□ -1.71
CCDC178Q5BJE1 PPIAP3-201ENST00000450588 505 ntBASIC4.34□□□□□ -1.71
CCDC178Q5BJE1 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC4.34□□□□□ -1.71
CCDC178Q5BJE1 RPL21P99-201ENST00000480369 423 ntBASIC4.34□□□□□ -1.71
CCDC178Q5BJE1 RNU6-1095P-201ENST00000516148 108 ntBASIC4.34□□□□□ -1.71
CCDC178Q5BJE1 RNU1-95P-201ENST00000516357 160 ntBASIC4.34□□□□□ -1.71
CCDC178Q5BJE1 RNU1-128P-201ENST00000516704 160 ntBASIC4.34□□□□□ -1.71
CCDC178Q5BJE1 RN7SKP219-201ENST00000516825 296 ntBASIC4.34□□□□□ -1.71
CCDC178Q5BJE1 RNU7-30P-201ENST00000516835 62 ntBASIC4.34□□□□□ -1.71
CCDC178Q5BJE1 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC4.34□□□□□ -1.71
CCDC178Q5BJE1 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
CCDC178Q5BJE1 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC4.34□□□□□ -1.71
CCDC178Q5BJE1 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC4.34□□□□□ -1.71
CCDC178Q5BJE1 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC4.34□□□□□ -1.71
CCDC178Q5BJE1 AC005668.1-201ENST00000571142 476 ntBASIC4.34□□□□□ -1.71
CCDC178Q5BJE1 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC4.34□□□□□ -1.71
CCDC178Q5BJE1 IGHV3-29-201ENST00000604817 344 ntBASIC4.34□□□□□ -1.71
CCDC178Q5BJE1 AC103710.3-201ENST00000608157 948 ntBASIC4.34□□□□□ -1.71
CCDC178Q5BJE1 AC012531.5-201ENST00000611375 151 ntBASIC4.34□□□□□ -1.71
CCDC178Q5BJE1 AC010133.1-201ENST00000615809 842 ntBASIC4.34□□□□□ -1.71
CCDC178Q5BJE1 AL391261.4-201ENST00000616012 481 ntBASIC4.34□□□□□ -1.71
CCDC178Q5BJE1 AC039056.2-201ENST00000622261 511 ntBASIC4.34□□□□□ -1.71
CCDC178Q5BJE1 AC025034.2-201ENST00000623264 286 ntBASIC4.34□□□□□ -1.71
CCDC178Q5BJE1 AC243312.2-201ENST00000623340 601 ntBASIC4.34□□□□□ -1.71
CCDC178Q5BJE1 ATP8A2P2-201ENST00000437678 1568 ntBASIC4.34□□□□□ -1.71
CCDC178Q5BJE1 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC4.34□□□□□ -1.71
CCDC178Q5BJE1 MTND5P17-201ENST00000418405 1603 ntBASIC4.33□□□□□ -1.72
CCDC178Q5BJE1 TAB3P1-202ENST00000452645 1634 ntBASIC4.33□□□□□ -1.72
CCDC178Q5BJE1 Y_RNA.231-201ENST00000364358 102 ntBASIC4.33□□□□□ -1.72
CCDC178Q5BJE1 SNORA62.3-201ENST00000365110 153 ntBASIC4.33□□□□□ -1.72
CCDC178Q5BJE1 Y_RNA.373-201ENST00000365600 103 ntBASIC4.33□□□□□ -1.72
CCDC178Q5BJE1 SNORA24.1-201ENST00000384401 135 ntBASIC4.33□□□□□ -1.72
CCDC178Q5BJE1 Y_RNA.509-201ENST00000384506 99 ntBASIC4.33□□□□□ -1.72
CCDC178Q5BJE1 RNU6-903P-201ENST00000391270 109 ntBASIC4.33□□□□□ -1.72
CCDC178Q5BJE1 SOD2P1-201ENST00000396543 562 ntBASIC4.33□□□□□ -1.72
CCDC178Q5BJE1 AL122016.1-201ENST00000403365 367 ntBASIC4.33□□□□□ -1.72
CCDC178Q5BJE1 RAB9AP3-201ENST00000412737 573 ntBASIC4.33□□□□□ -1.72
CCDC178Q5BJE1 NDUFB4P5-201ENST00000415445 361 ntBASIC4.33□□□□□ -1.72
CCDC178Q5BJE1 AL035423.1-201ENST00000420331 213 ntBASIC4.33□□□□□ -1.72
CCDC178Q5BJE1 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC4.33□□□□□ -1.72
CCDC178Q5BJE1 AC004866.2-201ENST00000438285 481 ntBASIC4.33□□□□□ -1.72
CCDC178Q5BJE1 RAB9AP1-201ENST00000449393 573 ntBASIC4.33□□□□□ -1.72
CCDC178Q5BJE1 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC4.33□□□□□ -1.72
CCDC178Q5BJE1 SNORD105B-201ENST00000458770 79 ntBASIC4.33□□□□□ -1.72
CCDC178Q5BJE1 SNORD97-201ENST00000459187 142 ntBASIC4.33□□□□□ -1.72
CCDC178Q5BJE1 snoU13.3-201ENST00000459441 104 ntBASIC4.33□□□□□ -1.72
CCDC178Q5BJE1 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC4.33□□□□□ -1.72
CCDC178Q5BJE1 RN7SKP18-201ENST00000516005 275 ntBASIC4.33□□□□□ -1.72
CCDC178Q5BJE1 RNU6-1038P-201ENST00000516516 104 ntBASIC4.33□□□□□ -1.72
CCDC178Q5BJE1 RNU6-1092P-201ENST00000516955 87 ntBASIC4.33□□□□□ -1.72
CCDC178Q5BJE1 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC4.33□□□□□ -1.72
CCDC178Q5BJE1 RANP9-201ENST00000519957 271 ntBASIC4.33□□□□□ -1.72
CCDC178Q5BJE1 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC4.33□□□□□ -1.72
CCDC178Q5BJE1 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC4.33□□□□□ -1.72
CCDC178Q5BJE1 AC078814.3-201ENST00000553036 491 ntBASIC4.33□□□□□ -1.72
CCDC178Q5BJE1 NCAPGP2-201ENST00000557911 754 ntBASIC4.33□□□□□ -1.72
CCDC178Q5BJE1 AC010680.4-201ENST00000605334 543 ntBASIC4.33□□□□□ -1.72
CCDC178Q5BJE1 AC012443.1-201ENST00000605605 231 ntBASIC4.33□□□□□ -1.72
CCDC178Q5BJE1 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
CCDC178Q5BJE1 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC4.33□□□□□ -1.72
CCDC178Q5BJE1 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC4.33□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 100.2 ms