Protein–RNA interactions for Protein: Q53GG5

PDLIM3, PDZ and LIM domain protein 3, humanhuman

Predicted RBP Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3Q53GG5 RPL23AP14-201ENST00000468281 468 ntBASIC2.99□□□□□ -1.93
PDLIM3Q53GG5 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
PDLIM3Q53GG5 RBM43P1-201ENST00000476891 1081 ntBASIC2.99□□□□□ -1.93
PDLIM3Q53GG5 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC2.99□□□□□ -1.93
PDLIM3Q53GG5 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC2.99□□□□□ -1.93
PDLIM3Q53GG5 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC2.99□□□□□ -1.93
PDLIM3Q53GG5 RNU6-352P-201ENST00000516908 107 ntBASIC2.99□□□□□ -1.93
PDLIM3Q53GG5 RNU4ATAC17P-201ENST00000517272 120 ntBASIC2.99□□□□□ -1.93
PDLIM3Q53GG5 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC2.99□□□□□ -1.93
PDLIM3Q53GG5 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
PDLIM3Q53GG5 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC2.99□□□□□ -1.93
PDLIM3Q53GG5 GLYCAM1-202ENST00000546607 553 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
PDLIM3Q53GG5 DNAJC8P1-201ENST00000554535 372 ntBASIC2.99□□□□□ -1.93
PDLIM3Q53GG5 AL355836.1-201ENST00000555951 870 ntBASIC2.99□□□□□ -1.93
PDLIM3Q53GG5 IGKV2OR2-8-201ENST00000558710 300 ntBASIC2.99□□□□□ -1.93
PDLIM3Q53GG5 AC009063.1-201ENST00000563342 702 ntBASIC2.99□□□□□ -1.93
PDLIM3Q53GG5 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC2.99□□□□□ -1.93
PDLIM3Q53GG5 MIR4293-201ENST00000584305 78 ntBASIC2.99□□□□□ -1.93
PDLIM3Q53GG5 AC078795.2-201ENST00000602835 1252 ntBASIC2.99□□□□□ -1.93
PDLIM3Q53GG5 AL136363.2-201ENST00000604173 851 ntBASIC2.99□□□□□ -1.93
PDLIM3Q53GG5 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC2.99□□□□□ -1.93
PDLIM3Q53GG5 AL161729.4-201ENST00000604650 476 ntBASIC2.99□□□□□ -1.93
PDLIM3Q53GG5 Z84480.1-201ENST00000605131 311 ntBASIC2.99□□□□□ -1.93
PDLIM3Q53GG5 AC012557.2-201ENST00000605919 418 ntBASIC2.99□□□□□ -1.93
PDLIM3Q53GG5 AC084782.3-201ENST00000612282 578 ntBASIC2.99□□□□□ -1.93
PDLIM3Q53GG5 AC072046.2-201ENST00000618366 268 ntBASIC2.99□□□□□ -1.93
PDLIM3Q53GG5 AL589994.2-201ENST00000621124 579 ntBASIC2.99□□□□□ -1.93
PDLIM3Q53GG5 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC2.99□□□□□ -1.93
PDLIM3Q53GG5 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC2.99□□□□□ -1.93
PDLIM3Q53GG5 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC2.99□□□□□ -1.93
PDLIM3Q53GG5 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC2.99□□□□□ -1.93
PDLIM3Q53GG5 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
PDLIM3Q53GG5 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
PDLIM3Q53GG5 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
PDLIM3Q53GG5 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
PDLIM3Q53GG5 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
PDLIM3Q53GG5 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC2.98□□□□□ -1.93
PDLIM3Q53GG5 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC2.98□□□□□ -1.93
PDLIM3Q53GG5 AC092447.7-201ENST00000422212 1621 ntBASIC2.98□□□□□ -1.93
PDLIM3Q53GG5 AC092435.3-201ENST00000565538 3654 ntBASIC2.98□□□□□ -1.93
PDLIM3Q53GG5 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC2.98□□□□□ -1.93
PDLIM3Q53GG5 DEFB108F-201ENST00000344638 222 ntBASIC2.98□□□□□ -1.93
PDLIM3Q53GG5 SNORD56.2-201ENST00000363242 71 ntBASIC2.98□□□□□ -1.93
PDLIM3Q53GG5 RNU4-1-201ENST00000363925 141 ntBASIC2.98□□□□□ -1.93
PDLIM3Q53GG5 RNA5SP42-201ENST00000364278 115 ntBASIC2.98□□□□□ -1.93
PDLIM3Q53GG5 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC2.98□□□□□ -1.93
PDLIM3Q53GG5 RNU6-701P-201ENST00000384059 107 ntBASIC2.98□□□□□ -1.93
PDLIM3Q53GG5 RNU6-39P-201ENST00000384344 107 ntBASIC2.98□□□□□ -1.93
PDLIM3Q53GG5 MIR184-201ENST00000384962 84 ntBASIC2.98□□□□□ -1.93
PDLIM3Q53GG5 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
PDLIM3Q53GG5 RPL7P60-201ENST00000397636 735 ntBASIC2.98□□□□□ -1.93
PDLIM3Q53GG5 RNU2-66P-201ENST00000410650 161 ntBASIC2.98□□□□□ -1.93
PDLIM3Q53GG5 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC2.98□□□□□ -1.93
PDLIM3Q53GG5 MTCO1P21-201ENST00000416634 589 ntBASIC2.98□□□□□ -1.93
PDLIM3Q53GG5 COTL1P1-201ENST00000422309 375 ntBASIC2.98□□□□□ -1.93
PDLIM3Q53GG5 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC2.98□□□□□ -1.93
PDLIM3Q53GG5 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC2.98□□□□□ -1.93
PDLIM3Q53GG5 AC092573.2-201ENST00000434546 243 ntBASIC2.98□□□□□ -1.93
PDLIM3Q53GG5 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC2.98□□□□□ -1.93
PDLIM3Q53GG5 RPL21P23-201ENST00000446654 460 ntBASIC2.98□□□□□ -1.93
PDLIM3Q53GG5 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC2.98□□□□□ -1.93
PDLIM3Q53GG5 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC2.98□□□□□ -1.93
PDLIM3Q53GG5 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC2.98□□□□□ -1.93
PDLIM3Q53GG5 RPS3AP17-201ENST00000472594 777 ntBASIC2.98□□□□□ -1.93
PDLIM3Q53GG5 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC2.98□□□□□ -1.93
PDLIM3Q53GG5 AC105252.1-201ENST00000503089 286 ntBASIC2.98□□□□□ -1.93
PDLIM3Q53GG5 LAMTOR3P2-201ENST00000504479 232 ntBASIC2.98□□□□□ -1.93
PDLIM3Q53GG5 RNU6-1256P-201ENST00000516539 103 ntBASIC2.98□□□□□ -1.93
PDLIM3Q53GG5 RNU6-579P-201ENST00000516879 102 ntBASIC2.98□□□□□ -1.93
PDLIM3Q53GG5 AC022616.3-201ENST00000523940 148 ntBASIC2.98□□□□□ -1.93
PDLIM3Q53GG5 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC2.98□□□□□ -1.93
PDLIM3Q53GG5 IL18-204ENST00000528832 795 ntAPPRIS P3 TSL 3 BASIC2.98□□□□□ -1.93
PDLIM3Q53GG5 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC2.98□□□□□ -1.93
PDLIM3Q53GG5 AC128657.1-201ENST00000549459 145 ntBASIC2.98□□□□□ -1.93
PDLIM3Q53GG5 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC2.98□□□□□ -1.93
PDLIM3Q53GG5 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC2.98□□□□□ -1.93
PDLIM3Q53GG5 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC2.98□□□□□ -1.93
PDLIM3Q53GG5 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC2.98□□□□□ -1.93
PDLIM3Q53GG5 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC2.98□□□□□ -1.93
PDLIM3Q53GG5 MIR3167-201ENST00000579623 85 ntBASIC2.98□□□□□ -1.93
PDLIM3Q53GG5 MIR3945-201ENST00000581853 98 ntBASIC2.98□□□□□ -1.93
PDLIM3Q53GG5 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC2.98□□□□□ -1.93
PDLIM3Q53GG5 AC146944.4-201ENST00000602697 718 ntBASIC2.98□□□□□ -1.93
PDLIM3Q53GG5 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC2.98□□□□□ -1.93
PDLIM3Q53GG5 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC2.98□□□□□ -1.93
PDLIM3Q53GG5 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC2.98□□□□□ -1.93
PDLIM3Q53GG5 AL392088.2-201ENST00000637607 285 ntBASIC2.98□□□□□ -1.93
PDLIM3Q53GG5 MIR7153-201ENST00000637758 57 ntBASIC2.98□□□□□ -1.93
PDLIM3Q53GG5 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC2.98□□□□□ -1.93
PDLIM3Q53GG5 MFSD8-236ENST00000641509 4050 ntBASIC2.98□□□□□ -1.93
PDLIM3Q53GG5 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC2.98□□□□□ -1.93
PDLIM3Q53GG5 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC2.97□□□□□ -1.93
PDLIM3Q53GG5 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC2.97□□□□□ -1.93
PDLIM3Q53GG5 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC2.97□□□□□ -1.93
PDLIM3Q53GG5 TAS2R14-202ENST00000537503 1858 ntAPPRIS P1 BASIC2.97□□□□□ -1.93
PDLIM3Q53GG5 FTLP6-201ENST00000355274 422 ntBASIC2.97□□□□□ -1.93
PDLIM3Q53GG5 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC2.97□□□□□ -1.93
PDLIM3Q53GG5 RNU6-188P-201ENST00000364207 107 ntBASIC2.97□□□□□ -1.93
PDLIM3Q53GG5 RNU6-282P-201ENST00000365357 103 ntBASIC2.97□□□□□ -1.93
PDLIM3Q53GG5 CD24P4-201ENST00000382840 243 ntBASIC2.97□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 101.2 ms