Protein–RNA interactions for Protein: Q13698

CACNA1S, Voltage-dependent L-type calcium channel subunit alpha-1S, humanhuman

Predictions only

Length 1,873 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1SQ13698 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.03□□□□□ -2.08
CACNA1SQ13698 RNU2-47P-201ENST00000410649 186 ntBASIC2.03□□□□□ -2.08
CACNA1SQ13698 MTCO3P12-201ENST00000416718 547 ntBASIC2.03□□□□□ -2.08
CACNA1SQ13698 RPS3AP9-201ENST00000417027 792 ntBASIC2.03□□□□□ -2.08
CACNA1SQ13698 Z75741.2-201ENST00000417272 1167 ntBASIC2.03□□□□□ -2.08
CACNA1SQ13698 AL512637.2-201ENST00000431287 1256 ntBASIC2.03□□□□□ -2.08
CACNA1SQ13698 MTND4P15-201ENST00000437913 1033 ntBASIC2.03□□□□□ -2.08
CACNA1SQ13698 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC2.03□□□□□ -2.08
CACNA1SQ13698 RNA5SP310-201ENST00000459084 116 ntBASIC2.03□□□□□ -2.08
CACNA1SQ13698 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC2.03□□□□□ -2.08
CACNA1SQ13698 AC087441.2-201ENST00000529141 262 ntBASIC2.03□□□□□ -2.08
CACNA1SQ13698 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC2.03□□□□□ -2.08
CACNA1SQ13698 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC2.03□□□□□ -2.08
CACNA1SQ13698 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC2.03□□□□□ -2.08
CACNA1SQ13698 OR5H6-201ENST00000615035 1113 ntAPPRIS P1 BASIC2.03□□□□□ -2.08
CACNA1SQ13698 AL157834.3-201ENST00000615543 103 ntBASIC2.03□□□□□ -2.08
CACNA1SQ13698 AL157770.1-201ENST00000623049 439 ntBASIC2.03□□□□□ -2.08
CACNA1SQ13698 AC132825.7-201ENST00000638744 335 ntBASIC2.03□□□□□ -2.08
CACNA1SQ13698 PSMD5-AS1-215ENST00000640622 205 ntBASIC2.03□□□□□ -2.08
CACNA1SQ13698 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
CACNA1SQ13698 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.03□□□□□ -2.08
CACNA1SQ13698 SNORD48-201ENST00000364953 64 ntBASIC2.03□□□□□ -2.09
CACNA1SQ13698 SNORA6-201ENST00000384033 151 ntBASIC2.03□□□□□ -2.09
CACNA1SQ13698 SPINK13-201ENST00000398450 509 ntAPPRIS P2 TSL 1 (best) BASIC2.03□□□□□ -2.09
CACNA1SQ13698 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC2.03□□□□□ -2.09
CACNA1SQ13698 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC2.03□□□□□ -2.09
CACNA1SQ13698 SFR1P2-201ENST00000421841 730 ntBASIC2.03□□□□□ -2.09
CACNA1SQ13698 RPL36P19-201ENST00000430744 301 ntBASIC2.03□□□□□ -2.09
CACNA1SQ13698 AC093110.1-201ENST00000456363 602 ntTSL 2 BASIC2.03□□□□□ -2.09
CACNA1SQ13698 SNRPGP1-201ENST00000553864 222 ntBASIC2.03□□□□□ -2.09
CACNA1SQ13698 MIR3935-201ENST00000583472 104 ntBASIC2.03□□□□□ -2.09
CACNA1SQ13698 RMST_2.1-201ENST00000617263 136 ntBASIC2.03□□□□□ -2.09
CACNA1SQ13698 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.09
CACNA1SQ13698 GNGT1-201ENST00000248572 720 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
CACNA1SQ13698 HSPE1P11-201ENST00000339579 310 ntBASIC2.02□□□□□ -2.09
CACNA1SQ13698 Y_RNA.224-201ENST00000364308 111 ntBASIC2.02□□□□□ -2.09
CACNA1SQ13698 CLYBL-AS1-201ENST00000416009 621 ntTSL 3 BASIC2.02□□□□□ -2.09
CACNA1SQ13698 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC2.02□□□□□ -2.09
CACNA1SQ13698 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC2.02□□□□□ -2.09
CACNA1SQ13698 RNF2P1-201ENST00000442955 1010 ntBASIC2.02□□□□□ -2.09
CACNA1SQ13698 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC2.02□□□□□ -2.09
CACNA1SQ13698 AL353718.1-201ENST00000451028 517 ntBASIC2.02□□□□□ -2.09
CACNA1SQ13698 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC2.02□□□□□ -2.09
CACNA1SQ13698 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC2.02□□□□□ -2.09
CACNA1SQ13698 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC2.02□□□□□ -2.09
CACNA1SQ13698 PLCZ1-203ENST00000534932 525 ntTSL 4 BASIC2.02□□□□□ -2.09
CACNA1SQ13698 MIR3912-201ENST00000577566 105 ntBASIC2.02□□□□□ -2.09
CACNA1SQ13698 SNORA4-201ENST00000584302 138 ntBASIC2.02□□□□□ -2.09
CACNA1SQ13698 U73023.1-201ENST00000603134 700 ntBASIC2.02□□□□□ -2.09
CACNA1SQ13698 U6.101-201ENST00000637707 76 ntBASIC2.02□□□□□ -2.09
CACNA1SQ13698 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
CACNA1SQ13698 AL513185.3-201ENST00000433335 1300 ntBASIC2.02□□□□□ -2.09
CACNA1SQ13698 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.01□□□□□ -2.09
CACNA1SQ13698 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
CACNA1SQ13698 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC2.01□□□□□ -2.09
CACNA1SQ13698 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
CACNA1SQ13698 MIR96-201ENST00000362288 78 ntBASIC2.01□□□□□ -2.09
CACNA1SQ13698 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
CACNA1SQ13698 MIR524-201ENST00000385242 87 ntBASIC2.01□□□□□ -2.09
CACNA1SQ13698 RNU6-174P-201ENST00000410406 106 ntBASIC2.01□□□□□ -2.09
CACNA1SQ13698 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC2.01□□□□□ -2.09
CACNA1SQ13698 AC013828.1-201ENST00000481845 158 ntBASIC2.01□□□□□ -2.09
CACNA1SQ13698 AC069528.1-202ENST00000482888 637 ntBASIC2.01□□□□□ -2.09
CACNA1SQ13698 AC079203.1-201ENST00000487972 404 ntBASIC2.01□□□□□ -2.09
CACNA1SQ13698 RPS15AP36-201ENST00000492022 382 ntBASIC2.01□□□□□ -2.09
CACNA1SQ13698 BTF3P12-201ENST00000519620 469 ntBASIC2.01□□□□□ -2.09
CACNA1SQ13698 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC2.01□□□□□ -2.09
CACNA1SQ13698 HSPA8P13-201ENST00000523715 472 ntBASIC2.01□□□□□ -2.09
CACNA1SQ13698 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC2.01□□□□□ -2.09
CACNA1SQ13698 AC139103.1-201ENST00000534696 1030 ntBASIC2.01□□□□□ -2.09
CACNA1SQ13698 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC2.01□□□□□ -2.09
CACNA1SQ13698 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC2.01□□□□□ -2.09
CACNA1SQ13698 AC009318.4-201ENST00000620496 486 ntBASIC2.01□□□□□ -2.09
CACNA1SQ13698 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
CACNA1SQ13698 ZNF876P-202ENST00000398732 1485 ntBASIC2.01□□□□□ -2.09
CACNA1SQ13698 SPINT4-201ENST00000279058 512 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
CACNA1SQ13698 RNU1-105P-201ENST00000363470 161 ntBASIC2.01□□□□□ -2.09
CACNA1SQ13698 RNA5SP354-201ENST00000391247 136 ntBASIC2.01□□□□□ -2.09
CACNA1SQ13698 AL035410.1-201ENST00000427409 427 ntBASIC2.01□□□□□ -2.09
CACNA1SQ13698 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC2.01□□□□□ -2.09
CACNA1SQ13698 AL512661.1-201ENST00000434586 1253 ntBASIC2.01□□□□□ -2.09
CACNA1SQ13698 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC2.01□□□□□ -2.09
CACNA1SQ13698 SUMO2P2-201ENST00000456482 255 ntBASIC2.01□□□□□ -2.09
CACNA1SQ13698 AC080013.2-201ENST00000460866 323 ntBASIC2.01□□□□□ -2.09
CACNA1SQ13698 AC113347.4-201ENST00000506032 685 ntTSL 3 BASIC2.01□□□□□ -2.09
CACNA1SQ13698 RNU6-1095P-201ENST00000516148 108 ntBASIC2.01□□□□□ -2.09
CACNA1SQ13698 RNU1-92P-201ENST00000517017 135 ntBASIC2.01□□□□□ -2.09
CACNA1SQ13698 AC011131.1-201ENST00000521224 252 ntTSL 2 BASIC2.01□□□□□ -2.09
CACNA1SQ13698 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC2.01□□□□□ -2.09
CACNA1SQ13698 AL035071.2-201ENST00000565572 459 ntTSL 3 BASIC2.01□□□□□ -2.09
CACNA1SQ13698 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC2.01□□□□□ -2.09
CACNA1SQ13698 DUXAP9-208ENST00000622815 614 ntBASIC2.01□□□□□ -2.09
CACNA1SQ13698 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC2.01□□□□□ -2.09
CACNA1SQ13698 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC2.01□□□□□ -2.09
CACNA1SQ13698 AC087359.1-201ENST00000508335 1740 ntBASIC2.01□□□□□ -2.09
CACNA1SQ13698 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC2□□□□□ -2.09
CACNA1SQ13698 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2□□□□□ -2.09
CACNA1SQ13698 RNA5SP252-201ENST00000391131 119 ntBASIC2□□□□□ -2.09
CACNA1SQ13698 SSXP10-201ENST00000402595 565 ntBASIC2□□□□□ -2.09
CACNA1SQ13698 AL365184.1-201ENST00000413801 572 ntTSL 3 BASIC2□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 102.5 ms