Protein–RNA interactions for Protein: P62684

HERVK_113, Endogenous retrovirus group K member 113 Gag polyprotein, humanhuman

Predictions only

Length 666 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERVK_113P62684 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC4.48□□□□□ -1.69
HERVK_113P62684 AC109635.4-202ENST00000531666 412 ntBASIC4.48□□□□□ -1.69
HERVK_113P62684 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC4.48□□□□□ -1.69
HERVK_113P62684 AL118558.2-201ENST00000556294 238 ntBASIC4.48□□□□□ -1.69
HERVK_113P62684 AC024619.4-201ENST00000580924 316 ntBASIC4.48□□□□□ -1.69
HERVK_113P62684 MIR5583-1-201ENST00000580941 59 ntBASIC4.48□□□□□ -1.69
HERVK_113P62684 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC4.48□□□□□ -1.69
HERVK_113P62684 AL022099.1-201ENST00000604551 712 ntBASIC4.48□□□□□ -1.69
HERVK_113P62684 AC113139.1-201ENST00000605049 239 ntBASIC4.48□□□□□ -1.69
HERVK_113P62684 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC4.48□□□□□ -1.69
HERVK_113P62684 Y_RNA.812-201ENST00000610788 101 ntBASIC4.48□□□□□ -1.69
HERVK_113P62684 Y_RNA.784-201ENST00000613803 101 ntBASIC4.48□□□□□ -1.69
HERVK_113P62684 Y_RNA.787-201ENST00000616522 101 ntBASIC4.48□□□□□ -1.69
HERVK_113P62684 Y_RNA.780-201ENST00000617336 101 ntBASIC4.48□□□□□ -1.69
HERVK_113P62684 Y_RNA.801-201ENST00000619005 101 ntBASIC4.48□□□□□ -1.69
HERVK_113P62684 uc_338.11-201ENST00000619132 160 ntBASIC4.48□□□□□ -1.69
HERVK_113P62684 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
HERVK_113P62684 API5P2-201ENST00000397055 1498 ntBASIC4.48□□□□□ -1.69
HERVK_113P62684 ZNF736P3Y-201ENST00000428264 1465 ntBASIC4.48□□□□□ -1.69
HERVK_113P62684 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
HERVK_113P62684 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC4.48□□□□□ -1.69
HERVK_113P62684 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
HERVK_113P62684 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
HERVK_113P62684 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC4.48□□□□□ -1.69
HERVK_113P62684 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
HERVK_113P62684 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC4.47□□□□□ -1.69
HERVK_113P62684 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC4.47□□□□□ -1.69
HERVK_113P62684 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC4.47□□□□□ -1.69
HERVK_113P62684 DDX10P1-201ENST00000448545 1933 ntBASIC4.47□□□□□ -1.69
HERVK_113P62684 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
HERVK_113P62684 RNU6-522P-201ENST00000364497 107 ntBASIC4.47□□□□□ -1.69
HERVK_113P62684 Y_RNA.378-201ENST00000365652 113 ntBASIC4.47□□□□□ -1.69
HERVK_113P62684 CRP-202ENST00000368110 667 ntTSL 3 BASIC4.47□□□□□ -1.69
HERVK_113P62684 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
HERVK_113P62684 Y_RNA.387-201ENST00000383918 102 ntBASIC4.47□□□□□ -1.69
HERVK_113P62684 MIR153-1-201ENST00000384914 90 ntBASIC4.47□□□□□ -1.69
HERVK_113P62684 ARL5AP1-201ENST00000418991 388 ntBASIC4.47□□□□□ -1.69
HERVK_113P62684 AL137014.1-201ENST00000420490 1226 ntBASIC4.47□□□□□ -1.69
HERVK_113P62684 BEND7P1-201ENST00000422058 457 ntBASIC4.47□□□□□ -1.69
HERVK_113P62684 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC4.47□□□□□ -1.69
HERVK_113P62684 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC4.47□□□□□ -1.69
HERVK_113P62684 RPS3AP12-201ENST00000443616 753 ntBASIC4.47□□□□□ -1.69
HERVK_113P62684 PRPS1P1-201ENST00000445305 876 ntBASIC4.47□□□□□ -1.69
HERVK_113P62684 AL590399.6-201ENST00000446396 307 ntBASIC4.47□□□□□ -1.69
HERVK_113P62684 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC4.47□□□□□ -1.69
HERVK_113P62684 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC4.47□□□□□ -1.69
HERVK_113P62684 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC4.47□□□□□ -1.69
HERVK_113P62684 AC108078.2-201ENST00000510750 236 ntBASIC4.47□□□□□ -1.69
HERVK_113P62684 RNU6-390P-201ENST00000516259 103 ntBASIC4.47□□□□□ -1.69
HERVK_113P62684 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC4.47□□□□□ -1.69
HERVK_113P62684 AP000763.2-201ENST00000540641 163 ntBASIC4.47□□□□□ -1.69
HERVK_113P62684 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC4.47□□□□□ -1.69
HERVK_113P62684 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC4.47□□□□□ -1.69
HERVK_113P62684 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC4.47□□□□□ -1.69
HERVK_113P62684 AL360157.1-201ENST00000565962 87 ntBASIC4.47□□□□□ -1.69
HERVK_113P62684 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC4.47□□□□□ -1.69
HERVK_113P62684 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
HERVK_113P62684 MIR5187-201ENST00000583479 76 ntBASIC4.47□□□□□ -1.69
HERVK_113P62684 MIR4424-201ENST00000585257 86 ntBASIC4.47□□□□□ -1.69
HERVK_113P62684 AC012669.1-201ENST00000603209 283 ntBASIC4.47□□□□□ -1.69
HERVK_113P62684 AL034351.1-201ENST00000605288 668 ntBASIC4.47□□□□□ -1.69
HERVK_113P62684 CTHRC1P1-201ENST00000605383 469 ntBASIC4.47□□□□□ -1.69
HERVK_113P62684 AC092807.2-201ENST00000609367 243 ntBASIC4.47□□□□□ -1.69
HERVK_113P62684 AL133215.3-201ENST00000609801 448 ntBASIC4.47□□□□□ -1.69
HERVK_113P62684 TUG1_2.1-201ENST00000614234 87 ntBASIC4.47□□□□□ -1.69
HERVK_113P62684 TEX41-265ENST00000627785 704 ntTSL 5 BASIC4.47□□□□□ -1.69
HERVK_113P62684 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC4.47□□□□□ -1.69
HERVK_113P62684 AL773545.4-201ENST00000637262 310 ntBASIC4.47□□□□□ -1.69
HERVK_113P62684 U6.105-201ENST00000637379 88 ntBASIC4.47□□□□□ -1.69
HERVK_113P62684 AL513478.4-201ENST00000641636 310 ntBASIC4.47□□□□□ -1.69
HERVK_113P62684 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC4.47□□□□□ -1.69
HERVK_113P62684 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
HERVK_113P62684 EXOC5P1-201ENST00000510543 1969 ntBASIC4.47□□□□□ -1.69
HERVK_113P62684 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
HERVK_113P62684 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC4.47□□□□□ -1.69
HERVK_113P62684 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
HERVK_113P62684 AP001350.1-201ENST00000601906 1524 ntBASIC4.46□□□□□ -1.69
HERVK_113P62684 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC4.46□□□□□ -1.69
HERVK_113P62684 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC4.46□□□□□ -1.69
HERVK_113P62684 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
HERVK_113P62684 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC4.46□□□□□ -1.7
HERVK_113P62684 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
HERVK_113P62684 XIAPP3-201ENST00000312918 795 ntBASIC4.46□□□□□ -1.7
HERVK_113P62684 Y_RNA.138-201ENST00000363462 102 ntBASIC4.46□□□□□ -1.7
HERVK_113P62684 RNU6-960P-201ENST00000364056 120 ntBASIC4.46□□□□□ -1.7
HERVK_113P62684 RNU6-1279P-201ENST00000383917 103 ntBASIC4.46□□□□□ -1.7
HERVK_113P62684 Y_RNA.530-201ENST00000384587 101 ntBASIC4.46□□□□□ -1.7
HERVK_113P62684 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
HERVK_113P62684 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
HERVK_113P62684 PTMAP5-201ENST00000393073 333 ntBASIC4.46□□□□□ -1.7
HERVK_113P62684 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC4.46□□□□□ -1.7
HERVK_113P62684 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC4.46□□□□□ -1.7
HERVK_113P62684 RAC1P6-201ENST00000423911 575 ntBASIC4.46□□□□□ -1.7
HERVK_113P62684 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC4.46□□□□□ -1.7
HERVK_113P62684 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
HERVK_113P62684 RPL36AP6-201ENST00000435770 321 ntBASIC4.46□□□□□ -1.7
HERVK_113P62684 HSPD1P21-201ENST00000436541 245 ntBASIC4.46□□□□□ -1.7
HERVK_113P62684 RPL23AP33-201ENST00000442301 452 ntBASIC4.46□□□□□ -1.7
HERVK_113P62684 RANP8-201ENST00000444720 713 ntBASIC4.46□□□□□ -1.7
HERVK_113P62684 IGKV1OR-3-201ENST00000446944 348 ntBASIC4.46□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 91.1 ms