Protein–RNA interactions for Protein: P61968

LMO4, LIM domain transcription factor LMO4, humanhuman

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4P61968 AC092447.10-201ENST00000620607 1652 ntBASIC2.83□□□□□ -1.96
LMO4P61968 Z83843.1-201ENST00000604070 3685 ntBASIC2.83□□□□□ -1.96
LMO4P61968 HSP90AA4P-202ENST00000506915 2228 ntBASIC2.83□□□□□ -1.96
LMO4P61968 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC2.83□□□□□ -1.96
LMO4P61968 RNU4-73P-201ENST00000363164 141 ntBASIC2.83□□□□□ -1.96
LMO4P61968 RNU4-1-201ENST00000363925 141 ntBASIC2.83□□□□□ -1.96
LMO4P61968 RNU6-1322P-201ENST00000364309 107 ntBASIC2.83□□□□□ -1.96
LMO4P61968 RNU6-283P-201ENST00000364788 107 ntBASIC2.83□□□□□ -1.96
LMO4P61968 Y_RNA.356-201ENST00000365475 113 ntBASIC2.83□□□□□ -1.96
LMO4P61968 RNU6-116P-201ENST00000384042 109 ntBASIC2.83□□□□□ -1.96
LMO4P61968 Y_RNA.529-201ENST00000384586 119 ntBASIC2.83□□□□□ -1.96
LMO4P61968 RPS4XP8-201ENST00000402039 771 ntBASIC2.83□□□□□ -1.96
LMO4P61968 RNU6ATAC10P-201ENST00000408635 111 ntBASIC2.83□□□□□ -1.96
LMO4P61968 MTATP6P18-201ENST00000417994 673 ntBASIC2.83□□□□□ -1.96
LMO4P61968 AL590233.1-201ENST00000430017 456 ntBASIC2.83□□□□□ -1.96
LMO4P61968 HMGB3P12-201ENST00000438745 556 ntBASIC2.83□□□□□ -1.96
LMO4P61968 AF228730.2-201ENST00000438784 848 ntBASIC2.83□□□□□ -1.96
LMO4P61968 CYCSP32-201ENST00000440548 321 ntBASIC2.83□□□□□ -1.96
LMO4P61968 SNRPGP6-201ENST00000451124 220 ntBASIC2.83□□□□□ -1.96
LMO4P61968 HMGN2P16-201ENST00000456802 261 ntBASIC2.83□□□□□ -1.96
LMO4P61968 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC2.83□□□□□ -1.96
LMO4P61968 UBE2Q2P9-201ENST00000490086 202 ntBASIC2.83□□□□□ -1.96
LMO4P61968 AC068305.1-201ENST00000497406 726 ntBASIC2.83□□□□□ -1.96
LMO4P61968 KLHL2P1-201ENST00000508691 521 ntBASIC2.83□□□□□ -1.96
LMO4P61968 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC2.83□□□□□ -1.96
LMO4P61968 RNU6-1095P-201ENST00000516148 108 ntBASIC2.83□□□□□ -1.96
LMO4P61968 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC2.83□□□□□ -1.96
LMO4P61968 AC099489.2-201ENST00000574976 260 ntBASIC2.83□□□□□ -1.96
LMO4P61968 MIR3167-201ENST00000579623 85 ntBASIC2.83□□□□□ -1.96
LMO4P61968 MIR3118-1-201ENST00000581787 76 ntBASIC2.83□□□□□ -1.96
LMO4P61968 AL031176.1-201ENST00000604554 466 ntBASIC2.83□□□□□ -1.96
LMO4P61968 AC007038.2-201ENST00000608095 740 ntBASIC2.83□□□□□ -1.96
LMO4P61968 YWHAEP7-203ENST00000622054 312 ntBASIC2.83□□□□□ -1.96
LMO4P61968 AL356585.4-201ENST00000623078 1229 ntBASIC2.83□□□□□ -1.96
LMO4P61968 AC093648.1-201ENST00000623546 606 ntBASIC2.83□□□□□ -1.96
LMO4P61968 AC091953.2-201ENST00000623979 160 ntBASIC2.83□□□□□ -1.96
LMO4P61968 AC092125.1-201ENST00000562568 1995 ntBASIC2.83□□□□□ -1.96
LMO4P61968 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC2.83□□□□□ -1.96
LMO4P61968 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
LMO4P61968 AC068647.1-201ENST00000489539 2265 ntBASIC2.82□□□□□ -1.96
LMO4P61968 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC2.82□□□□□ -1.96
LMO4P61968 AC073073.2-201ENST00000609827 2578 ntBASIC2.82□□□□□ -1.96
LMO4P61968 SNORD6-201ENST00000365444 73 ntBASIC2.82□□□□□ -1.96
LMO4P61968 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC2.82□□□□□ -1.96
LMO4P61968 DEFB109C-201ENST00000382575 264 ntBASIC2.82□□□□□ -1.96
LMO4P61968 DEFB109B-201ENST00000382656 264 ntBASIC2.82□□□□□ -1.96
LMO4P61968 RNU6-456P-201ENST00000384493 107 ntBASIC2.82□□□□□ -1.96
LMO4P61968 FGFR1OP2P1-201ENST00000395943 500 ntBASIC2.82□□□□□ -1.96
LMO4P61968 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC2.82□□□□□ -1.96
LMO4P61968 OR9R1P-201ENST00000412200 877 ntBASIC2.82□□□□□ -1.96
LMO4P61968 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC2.82□□□□□ -1.96
LMO4P61968 AC127526.1-201ENST00000417526 366 ntBASIC2.82□□□□□ -1.96
LMO4P61968 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC2.82□□□□□ -1.96
LMO4P61968 SDCBPP3-201ENST00000419629 891 ntBASIC2.82□□□□□ -1.96
LMO4P61968 MTCO2P5-201ENST00000422621 426 ntBASIC2.82□□□□□ -1.96
LMO4P61968 DUTP6-201ENST00000425573 462 ntBASIC2.82□□□□□ -1.96
LMO4P61968 AC008850.1-201ENST00000427546 362 ntBASIC2.82□□□□□ -1.96
LMO4P61968 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC2.82□□□□□ -1.96
LMO4P61968 AL049734.2-201ENST00000441066 616 ntBASIC2.82□□□□□ -1.96
LMO4P61968 USP9YP15-201ENST00000442391 422 ntBASIC2.82□□□□□ -1.96
LMO4P61968 AL121871.1-201ENST00000443413 436 ntBASIC2.82□□□□□ -1.96
LMO4P61968 RPS29P31-201ENST00000446147 164 ntBASIC2.82□□□□□ -1.96
LMO4P61968 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC2.82□□□□□ -1.96
LMO4P61968 AL136380.1-201ENST00000447970 162 ntBASIC2.82□□□□□ -1.96
LMO4P61968 AC115115.1-201ENST00000449927 248 ntBASIC2.82□□□□□ -1.96
LMO4P61968 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC2.82□□□□□ -1.96
LMO4P61968 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC2.82□□□□□ -1.96
LMO4P61968 RPS20P20-201ENST00000460498 340 ntBASIC2.82□□□□□ -1.96
LMO4P61968 AP001992.1-205ENST00000462248 379 ntBASIC2.82□□□□□ -1.96
LMO4P61968 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC2.82□□□□□ -1.96
LMO4P61968 AC083798.1-201ENST00000472671 131 ntBASIC2.82□□□□□ -1.96
LMO4P61968 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC2.82□□□□□ -1.96
LMO4P61968 AC106872.2-201ENST00000494303 480 ntBASIC2.82□□□□□ -1.96
LMO4P61968 AC093278.1-201ENST00000494700 600 ntBASIC2.82□□□□□ -1.96
LMO4P61968 AC010587.1-201ENST00000505809 469 ntBASIC2.82□□□□□ -1.96
LMO4P61968 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC2.82□□□□□ -1.96
LMO4P61968 HMGB3P15-201ENST00000507326 574 ntBASIC2.82□□□□□ -1.96
LMO4P61968 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC2.82□□□□□ -1.96
LMO4P61968 RNU6-1153P-201ENST00000516760 105 ntBASIC2.82□□□□□ -1.96
LMO4P61968 RNU6-835P-201ENST00000516974 104 ntBASIC2.82□□□□□ -1.96
LMO4P61968 RNU6-1220P-201ENST00000517126 108 ntBASIC2.82□□□□□ -1.96
LMO4P61968 AC107934.1-201ENST00000522215 217 ntBASIC2.82□□□□□ -1.96
LMO4P61968 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC2.82□□□□□ -1.96
LMO4P61968 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC2.82□□□□□ -1.96
LMO4P61968 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC2.82□□□□□ -1.96
LMO4P61968 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC2.82□□□□□ -1.96
LMO4P61968 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC2.82□□□□□ -1.96
LMO4P61968 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC2.82□□□□□ -1.96
LMO4P61968 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC2.82□□□□□ -1.96
LMO4P61968 SYF2P1-201ENST00000550658 413 ntBASIC2.82□□□□□ -1.96
LMO4P61968 ARL2BPP2-201ENST00000550907 489 ntBASIC2.82□□□□□ -1.96
LMO4P61968 SETP7-201ENST00000552169 453 ntBASIC2.82□□□□□ -1.96
LMO4P61968 MEG8-218ENST00000556720 456 ntTSL 3 BASIC2.82□□□□□ -1.96
LMO4P61968 AC034105.3-201ENST00000565294 442 ntBASIC2.82□□□□□ -1.96
LMO4P61968 RPS3AP23-202ENST00000574601 686 ntBASIC2.82□□□□□ -1.96
LMO4P61968 MIR4276-201ENST00000584832 70 ntBASIC2.82□□□□□ -1.96
LMO4P61968 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC2.82□□□□□ -1.96
LMO4P61968 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC2.82□□□□□ -1.96
LMO4P61968 AL160281.1-201ENST00000605307 311 ntBASIC2.82□□□□□ -1.96
LMO4P61968 AL136363.1-201ENST00000605349 337 ntBASIC2.82□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 100.3 ms