Protein–RNA interactions for Protein: P61011

SRP54, Signal recognition particle 54 kDa protein, humanhuman

Known RBP Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54P61011 RNU6-140P-201ENST00000384566 108 ntBASIC2.83□□□□□ -1.96
SRP54P61011 RNA5SP492-201ENST00000411330 114 ntBASIC2.83□□□□□ -1.96
SRP54P61011 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC2.83□□□□□ -1.96
SRP54P61011 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC2.83□□□□□ -1.96
SRP54P61011 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC2.83□□□□□ -1.96
SRP54P61011 AC087499.2-201ENST00000432861 149 ntBASIC2.83□□□□□ -1.96
SRP54P61011 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC2.83□□□□□ -1.96
SRP54P61011 AL354941.1-201ENST00000438600 464 ntBASIC2.83□□□□□ -1.96
SRP54P61011 AC005094.1-201ENST00000440420 368 ntBASIC2.83□□□□□ -1.96
SRP54P61011 RPL7P36-201ENST00000444633 681 ntBASIC2.83□□□□□ -1.96
SRP54P61011 NIPA2P5-201ENST00000452282 464 ntBASIC2.83□□□□□ -1.96
SRP54P61011 AC010631.1-201ENST00000474150 156 ntBASIC2.83□□□□□ -1.96
SRP54P61011 UBE2DNL-203ENST00000474922 222 ntBASIC2.83□□□□□ -1.96
SRP54P61011 AC055855.1-201ENST00000489563 579 ntBASIC2.83□□□□□ -1.96
SRP54P61011 HSPE1P23-201ENST00000509838 286 ntBASIC2.83□□□□□ -1.96
SRP54P61011 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC2.83□□□□□ -1.96
SRP54P61011 MTND5P13-201ENST00000513046 1079 ntBASIC2.83□□□□□ -1.96
SRP54P61011 RN7SKP132-201ENST00000516001 208 ntBASIC2.83□□□□□ -1.96
SRP54P61011 RNU6-390P-201ENST00000516259 103 ntBASIC2.83□□□□□ -1.96
SRP54P61011 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC2.83□□□□□ -1.96
SRP54P61011 AC087373.1-201ENST00000524920 491 ntBASIC2.83□□□□□ -1.96
SRP54P61011 AC090503.1-201ENST00000548029 729 ntTSL 3 BASIC2.83□□□□□ -1.96
SRP54P61011 AC093012.1-202ENST00000549403 582 ntBASIC2.83□□□□□ -1.96
SRP54P61011 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC2.83□□□□□ -1.96
SRP54P61011 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC2.83□□□□□ -1.96
SRP54P61011 LINC02311-201ENST00000556144 383 ntTSL 3 BASIC2.83□□□□□ -1.96
SRP54P61011 AL391261.3-201ENST00000557194 520 ntBASIC2.83□□□□□ -1.96
SRP54P61011 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC2.83□□□□□ -1.96
SRP54P61011 AC138761.3-201ENST00000579993 334 ntBASIC2.83□□□□□ -1.96
SRP54P61011 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC2.83□□□□□ -1.96
SRP54P61011 SOX2-OT-224ENST00000595313 716 ntTSL 5 BASIC2.83□□□□□ -1.96
SRP54P61011 AC010620.2-201ENST00000600135 313 ntBASIC2.83□□□□□ -1.96
SRP54P61011 AC103710.1-201ENST00000610003 901 ntBASIC2.83□□□□□ -1.96
SRP54P61011 FTX_3.1-201ENST00000610451 147 ntBASIC2.83□□□□□ -1.96
SRP54P61011 SNHG22-203ENST00000617833 660 ntBASIC2.83□□□□□ -1.96
SRP54P61011 AC002064.3-201ENST00000623448 346 ntBASIC2.83□□□□□ -1.96
SRP54P61011 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC2.83□□□□□ -1.96
SRP54P61011 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
SRP54P61011 FTLP6-201ENST00000355274 422 ntBASIC2.82□□□□□ -1.96
SRP54P61011 MIR767-201ENST00000390228 109 ntBASIC2.82□□□□□ -1.96
SRP54P61011 AL096701.2-201ENST00000416920 238 ntBASIC2.82□□□□□ -1.96
SRP54P61011 AL391069.1-201ENST00000422153 358 ntTSL 3 BASIC2.82□□□□□ -1.96
SRP54P61011 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC2.82□□□□□ -1.96
SRP54P61011 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC2.82□□□□□ -1.96
SRP54P61011 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC2.82□□□□□ -1.96
SRP54P61011 AC008571.1-201ENST00000467232 300 ntBASIC2.82□□□□□ -1.96
SRP54P61011 AIG1P1-201ENST00000503376 148 ntBASIC2.82□□□□□ -1.96
SRP54P61011 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC2.82□□□□□ -1.96
SRP54P61011 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC2.82□□□□□ -1.96
SRP54P61011 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC2.82□□□□□ -1.96
SRP54P61011 MRPS36P3-201ENST00000519284 130 ntBASIC2.82□□□□□ -1.96
SRP54P61011 MTCO1P47-201ENST00000523889 1271 ntBASIC2.82□□□□□ -1.96
SRP54P61011 SUB1P1-201ENST00000524415 382 ntBASIC2.82□□□□□ -1.96
SRP54P61011 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
SRP54P61011 AP000907.2-201ENST00000530827 353 ntBASIC2.82□□□□□ -1.96
SRP54P61011 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC2.82□□□□□ -1.96
SRP54P61011 AC007115.1-201ENST00000546853 234 ntBASIC2.82□□□□□ -1.96
SRP54P61011 AC123904.3-201ENST00000547218 814 ntBASIC2.82□□□□□ -1.96
SRP54P61011 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC2.82□□□□□ -1.96
SRP54P61011 AC087286.1-201ENST00000560712 568 ntTSL 3 BASIC2.82□□□□□ -1.96
SRP54P61011 AC009097.3-201ENST00000563557 1018 ntBASIC2.82□□□□□ -1.96
SRP54P61011 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC2.82□□□□□ -1.96
SRP54P61011 C15orf65-201ENST00000569691 729 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
SRP54P61011 ISCA1P3-201ENST00000577104 373 ntBASIC2.82□□□□□ -1.96
SRP54P61011 AC006023.1-201ENST00000603944 259 ntBASIC2.82□□□□□ -1.96
SRP54P61011 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC2.82□□□□□ -1.96
SRP54P61011 AL031667.3-201ENST00000620124 655 ntBASIC2.82□□□□□ -1.96
SRP54P61011 AC007490.1-201ENST00000624321 703 ntBASIC2.82□□□□□ -1.96
SRP54P61011 AC092813.1-201ENST00000635455 969 ntTSL 5 BASIC2.82□□□□□ -1.96
SRP54P61011 PABPC1P9-201ENST00000426076 1612 ntBASIC2.82□□□□□ -1.96
SRP54P61011 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
SRP54P61011 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.81□□□□□ -1.96
SRP54P61011 RNU5A-8P-201ENST00000364102 114 ntBASIC2.81□□□□□ -1.96
SRP54P61011 MIR888-201ENST00000401186 77 ntBASIC2.81□□□□□ -1.96
SRP54P61011 AL359634.1-202ENST00000404721 284 ntBASIC2.81□□□□□ -1.96
SRP54P61011 SNORD88.1-201ENST00000408684 91 ntBASIC2.81□□□□□ -1.96
SRP54P61011 RNU6-193P-201ENST00000410977 107 ntBASIC2.81□□□□□ -1.96
SRP54P61011 ZRANB2-AS2-201ENST00000411721 518 ntTSL 3 BASIC2.81□□□□□ -1.96
SRP54P61011 AC063965.1-201ENST00000416679 499 ntTSL 3 BASIC2.81□□□□□ -1.96
SRP54P61011 AC244035.1-201ENST00000430042 390 ntBASIC2.81□□□□□ -1.96
SRP54P61011 MTND1P20-201ENST00000430341 950 ntBASIC2.81□□□□□ -1.96
SRP54P61011 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC2.81□□□□□ -1.96
SRP54P61011 Z80107.1-201ENST00000436830 412 ntBASIC2.81□□□□□ -1.96
SRP54P61011 MTCYBP3-201ENST00000445588 1137 ntBASIC2.81□□□□□ -1.96
SRP54P61011 AL606662.1-201ENST00000445763 553 ntBASIC2.81□□□□□ -1.96
SRP54P61011 RPS27AP9-201ENST00000477681 438 ntBASIC2.81□□□□□ -1.96
SRP54P61011 AC009901.1-201ENST00000506703 541 ntBASIC2.81□□□□□ -1.96
SRP54P61011 AC114786.4-201ENST00000508771 728 ntBASIC2.81□□□□□ -1.96
SRP54P61011 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC2.81□□□□□ -1.96
SRP54P61011 AC114797.1-201ENST00000514003 728 ntBASIC2.81□□□□□ -1.96
SRP54P61011 RN7SKP265-201ENST00000516448 223 ntBASIC2.81□□□□□ -1.96
SRP54P61011 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC2.81□□□□□ -1.96
SRP54P61011 AC002400.1-201ENST00000569310 726 ntBASIC2.81□□□□□ -1.96
SRP54P61011 AP001004.1-201ENST00000582468 324 ntBASIC2.81□□□□□ -1.96
SRP54P61011 AP000811.1-201ENST00000603803 651 ntBASIC2.81□□□□□ -1.96
SRP54P61011 ATP1B3P1-201ENST00000605365 821 ntBASIC2.81□□□□□ -1.96
SRP54P61011 AC245297.3-203ENST00000612135 405 ntTSL 5 BASIC2.81□□□□□ -1.96
SRP54P61011 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC2.81□□□□□ -1.96
SRP54P61011 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC2.8□□□□□ -1.96
SRP54P61011 AL161431.1-201ENST00000618966 4205 ntBASIC2.8□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 109.7 ms