Protein–RNA interactions for Protein: P61009

SPCS3, Signal peptidase complex subunit 3, humanhuman

Predictions only

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3P61009 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC1.69□□□□□ -2.14
SPCS3P61009 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC1.69□□□□□ -2.14
SPCS3P61009 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC1.69□□□□□ -2.14
SPCS3P61009 CASP12-207ENST00000447913 819 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
SPCS3P61009 TPTE2P6-203ENST00000450973 649 ntTSL 5 BASIC1.69□□□□□ -2.14
SPCS3P61009 AC026347.1-201ENST00000463255 474 ntTSL 3 BASIC1.69□□□□□ -2.14
SPCS3P61009 AC004924.1-201ENST00000480160 781 ntBASIC1.69□□□□□ -2.14
SPCS3P61009 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC1.69□□□□□ -2.14
SPCS3P61009 AC024579.1-201ENST00000503685 371 ntTSL 5 BASIC1.69□□□□□ -2.14
SPCS3P61009 LTV1P1-201ENST00000510683 1237 ntBASIC1.69□□□□□ -2.14
SPCS3P61009 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
SPCS3P61009 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC1.69□□□□□ -2.14
SPCS3P61009 SNRPGP18-201ENST00000553000 214 ntBASIC1.69□□□□□ -2.14
SPCS3P61009 MIR3200-201ENST00000580767 85 ntBASIC1.69□□□□□ -2.14
SPCS3P61009 AC016382.1-201ENST00000583580 387 ntTSL 3 BASIC1.69□□□□□ -2.14
SPCS3P61009 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC1.69□□□□□ -2.14
SPCS3P61009 AC069294.1-201ENST00000608397 350 ntBASIC1.69□□□□□ -2.14
SPCS3P61009 MIR4275-201ENST00000636486 87 ntBASIC1.69□□□□□ -2.14
SPCS3P61009 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC1.69□□□□□ -2.14
SPCS3P61009 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC1.68□□□□□ -2.14
SPCS3P61009 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC1.68□□□□□ -2.14
SPCS3P61009 ELF2P3-201ENST00000445099 1506 ntBASIC1.68□□□□□ -2.14
SPCS3P61009 RNU6-1159P-201ENST00000362933 107 ntBASIC1.68□□□□□ -2.14
SPCS3P61009 RNU6-1066P-201ENST00000363573 105 ntBASIC1.68□□□□□ -2.14
SPCS3P61009 SUGT1P1-201ENST00000379514 476 ntBASIC1.68□□□□□ -2.14
SPCS3P61009 ZNF365-203ENST00000395249 433 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
SPCS3P61009 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC1.68□□□□□ -2.14
SPCS3P61009 TAF13P2-201ENST00000416876 286 ntBASIC1.68□□□□□ -2.14
SPCS3P61009 MTATP6P27-201ENST00000416987 621 ntBASIC1.68□□□□□ -2.14
SPCS3P61009 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC1.68□□□□□ -2.14
SPCS3P61009 RPS3AP44-201ENST00000425466 790 ntBASIC1.68□□□□□ -2.14
SPCS3P61009 LINC01953-201ENST00000426870 717 ntTSL 5 BASIC1.68□□□□□ -2.14
SPCS3P61009 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC1.68□□□□□ -2.14
SPCS3P61009 RPL30P4-201ENST00000429309 333 ntBASIC1.68□□□□□ -2.14
SPCS3P61009 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC1.68□□□□□ -2.14
SPCS3P61009 RPL23AP3-201ENST00000453844 468 ntBASIC1.68□□□□□ -2.14
SPCS3P61009 AC010976.1-211ENST00000454503 644 ntTSL 2 BASIC1.68□□□□□ -2.14
SPCS3P61009 snoU109.1-201ENST00000459339 135 ntBASIC1.68□□□□□ -2.14
SPCS3P61009 RPS20P20-201ENST00000460498 340 ntBASIC1.68□□□□□ -2.14
SPCS3P61009 AP001486.1-201ENST00000463339 476 ntBASIC1.68□□□□□ -2.14
SPCS3P61009 RPS20P22-201ENST00000473700 357 ntBASIC1.68□□□□□ -2.14
SPCS3P61009 AC025181.1-201ENST00000477507 416 ntBASIC1.68□□□□□ -2.14
SPCS3P61009 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC1.68□□□□□ -2.14
SPCS3P61009 RNU6-528P-201ENST00000516926 100 ntBASIC1.68□□□□□ -2.14
SPCS3P61009 OR5AL2P-201ENST00000532185 920 ntBASIC1.68□□□□□ -2.14
SPCS3P61009 CCDC179-202ENST00000532798 791 ntAPPRIS P1 TSL 2 BASIC1.68□□□□□ -2.14
SPCS3P61009 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC1.68□□□□□ -2.14
SPCS3P61009 LINC00933-203ENST00000559812 219 ntBASIC1.68□□□□□ -2.14
SPCS3P61009 AC007151.1-201ENST00000572774 483 ntBASIC1.68□□□□□ -2.14
SPCS3P61009 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC1.68□□□□□ -2.14
SPCS3P61009 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.68□□□□□ -2.14
SPCS3P61009 AL391813.1-201ENST00000603098 260 ntBASIC1.68□□□□□ -2.14
SPCS3P61009 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC1.68□□□□□ -2.14
SPCS3P61009 AC013476.2-201ENST00000614456 459 ntBASIC1.68□□□□□ -2.14
SPCS3P61009 AL603758.1-201ENST00000618654 241 ntBASIC1.68□□□□□ -2.14
SPCS3P61009 AL596245.1-201ENST00000618994 362 ntBASIC1.68□□□□□ -2.14
SPCS3P61009 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC1.68□□□□□ -2.14
SPCS3P61009 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC1.68□□□□□ -2.14
SPCS3P61009 AL159972.1-201ENST00000625150 448 ntBASIC1.68□□□□□ -2.14
SPCS3P61009 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
SPCS3P61009 ZNF702P-202ENST00000434269 1966 ntBASIC1.68□□□□□ -2.14
SPCS3P61009 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC1.67□□□□□ -2.14
SPCS3P61009 MTCO1P9-201ENST00000505577 1534 ntBASIC1.67□□□□□ -2.14
SPCS3P61009 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC1.67□□□□□ -2.14
SPCS3P61009 RNU5E-8P-201ENST00000363502 116 ntBASIC1.67□□□□□ -2.14
SPCS3P61009 RNU4-42P-201ENST00000364738 142 ntBASIC1.67□□□□□ -2.14
SPCS3P61009 RPL17P12-201ENST00000413391 526 ntBASIC1.67□□□□□ -2.14
SPCS3P61009 PGBD4P6-201ENST00000421501 610 ntBASIC1.67□□□□□ -2.14
SPCS3P61009 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC1.67□□□□□ -2.14
SPCS3P61009 IFNA20P-201ENST00000436840 528 ntBASIC1.67□□□□□ -2.14
SPCS3P61009 RPL23AP6-201ENST00000446637 472 ntBASIC1.67□□□□□ -2.14
SPCS3P61009 AL121970.1-201ENST00000447557 929 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
SPCS3P61009 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC1.67□□□□□ -2.14
SPCS3P61009 AC026410.2-201ENST00000460281 156 ntBASIC1.67□□□□□ -2.14
SPCS3P61009 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC1.67□□□□□ -2.14
SPCS3P61009 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC1.67□□□□□ -2.14
SPCS3P61009 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC1.67□□□□□ -2.14
SPCS3P61009 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC1.67□□□□□ -2.14
SPCS3P61009 CBX3P7-201ENST00000532876 502 ntBASIC1.67□□□□□ -2.14
SPCS3P61009 TIMM9-203ENST00000555061 598 ntAPPRIS P1 TSL 1 (best) BASIC1.67□□□□□ -2.14
SPCS3P61009 AC008764.5-201ENST00000597851 190 ntTSL 5 BASIC1.67□□□□□ -2.14
SPCS3P61009 AP002906.1-201ENST00000603405 233 ntBASIC1.67□□□□□ -2.14
SPCS3P61009 AC026790.2-201ENST00000606282 430 ntBASIC1.67□□□□□ -2.14
SPCS3P61009 AC007998.5-201ENST00000622938 237 ntBASIC1.67□□□□□ -2.14
SPCS3P61009 AP002791.1-201ENST00000623291 381 ntBASIC1.67□□□□□ -2.14
SPCS3P61009 PISRT1-201ENST00000626175 531 ntBASIC1.67□□□□□ -2.14
SPCS3P61009 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC1.67□□□□□ -2.14
SPCS3P61009 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC1.67□□□□□ -2.14
SPCS3P61009 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
SPCS3P61009 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
SPCS3P61009 RNU1-91P-201ENST00000364746 163 ntBASIC1.66□□□□□ -2.14
SPCS3P61009 Y_RNA.333-201ENST00000365274 102 ntBASIC1.66□□□□□ -2.14
SPCS3P61009 RPA3-203ENST00000401447 414 ntTSL 3 BASIC1.66□□□□□ -2.14
SPCS3P61009 U6atac.2-201ENST00000408644 118 ntBASIC1.66□□□□□ -2.14
SPCS3P61009 SNORA11.4-201ENST00000408823 129 ntBASIC1.66□□□□□ -2.14
SPCS3P61009 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
SPCS3P61009 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
SPCS3P61009 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC1.66□□□□□ -2.14
SPCS3P61009 DNAJC19P4-201ENST00000440115 345 ntBASIC1.66□□□□□ -2.14
SPCS3P61009 AC098831.1-201ENST00000440661 216 ntBASIC1.66□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 118.3 ms