Protein–RNA interactions for Protein: P55072

VCP, Transitional endoplasmic reticulum ATPase, humanhuman

Known RBP Predictions only

Length 806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCPP55072 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC2.94□□□□□ -1.94
VCPP55072 AC128657.1-201ENST00000549459 145 ntBASIC2.94□□□□□ -1.94
VCPP55072 AC090888.2-201ENST00000559765 1144 ntBASIC2.94□□□□□ -1.94
VCPP55072 AC136618.2-201ENST00000575091 400 ntBASIC2.94□□□□□ -1.94
VCPP55072 MTCO3P13-201ENST00000577757 781 ntBASIC2.94□□□□□ -1.94
VCPP55072 AC023043.3-201ENST00000593113 385 ntBASIC2.94□□□□□ -1.94
VCPP55072 AC010620.2-201ENST00000600135 313 ntBASIC2.94□□□□□ -1.94
VCPP55072 AL161629.2-201ENST00000615347 275 ntBASIC2.94□□□□□ -1.94
VCPP55072 AC140725.3-201ENST00000616193 880 ntBASIC2.94□□□□□ -1.94
VCPP55072 AC009159.2-201ENST00000617603 606 ntBASIC2.94□□□□□ -1.94
VCPP55072 AL356596.1-201ENST00000624230 379 ntBASIC2.94□□□□□ -1.94
VCPP55072 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC2.94□□□□□ -1.94
VCPP55072 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC2.94□□□□□ -1.94
VCPP55072 TPTE2P4-201ENST00000258589 1605 ntBASIC2.93□□□□□ -1.94
VCPP55072 AC092593.1-201ENST00000515413 1815 ntBASIC2.93□□□□□ -1.94
VCPP55072 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
VCPP55072 AC092447.10-201ENST00000620607 1652 ntBASIC2.93□□□□□ -1.94
VCPP55072 AL391994.1-201ENST00000254724 282 ntBASIC2.93□□□□□ -1.94
VCPP55072 RPL21P132-201ENST00000331267 462 ntBASIC2.93□□□□□ -1.94
VCPP55072 RNU6-97P-201ENST00000363387 104 ntBASIC2.93□□□□□ -1.94
VCPP55072 RNA5SP99-201ENST00000364020 114 ntBASIC2.93□□□□□ -1.94
VCPP55072 RNU6-1180P-201ENST00000364935 107 ntBASIC2.93□□□□□ -1.94
VCPP55072 RNU6-723P-201ENST00000383973 107 ntBASIC2.93□□□□□ -1.94
VCPP55072 AL356421.1-201ENST00000403255 413 ntBASIC2.93□□□□□ -1.94
VCPP55072 MIR1289-2-201ENST00000408360 111 ntBASIC2.93□□□□□ -1.94
VCPP55072 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC2.93□□□□□ -1.94
VCPP55072 HNRNPDLP1-201ENST00000412834 550 ntBASIC2.93□□□□□ -1.94
VCPP55072 BX682237.1-201ENST00000415016 335 ntBASIC2.93□□□□□ -1.94
VCPP55072 CCDC58P2-201ENST00000417131 366 ntBASIC2.93□□□□□ -1.94
VCPP55072 BX119904.4-201ENST00000424402 301 ntBASIC2.93□□□□□ -1.94
VCPP55072 AC234781.2-201ENST00000426370 994 ntBASIC2.93□□□□□ -1.94
VCPP55072 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC2.93□□□□□ -1.94
VCPP55072 AL162725.2-201ENST00000430545 748 ntTSL 5 BASIC2.93□□□□□ -1.94
VCPP55072 AL008629.1-201ENST00000438615 184 ntBASIC2.93□□□□□ -1.94
VCPP55072 AL606662.1-201ENST00000445763 553 ntBASIC2.93□□□□□ -1.94
VCPP55072 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC2.93□□□□□ -1.94
VCPP55072 AL160287.1-201ENST00000455612 432 ntTSL 3 BASIC2.93□□□□□ -1.94
VCPP55072 GRM7-AS3-208ENST00000455623 947 ntTSL 3 BASIC2.93□□□□□ -1.94
VCPP55072 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC2.93□□□□□ -1.94
VCPP55072 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC2.93□□□□□ -1.94
VCPP55072 AC003982.1-202ENST00000469928 248 ntBASIC2.93□□□□□ -1.94
VCPP55072 AC093809.1-201ENST00000509155 340 ntBASIC2.93□□□□□ -1.94
VCPP55072 AC109464.2-201ENST00000510242 943 ntBASIC2.93□□□□□ -1.94
VCPP55072 RNU6-798P-201ENST00000516912 103 ntBASIC2.93□□□□□ -1.94
VCPP55072 Y_RNA.717-201ENST00000517106 92 ntBASIC2.93□□□□□ -1.94
VCPP55072 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC2.93□□□□□ -1.94
VCPP55072 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC2.93□□□□□ -1.94
VCPP55072 ELOCP32-201ENST00000548625 324 ntBASIC2.93□□□□□ -1.94
VCPP55072 DEFB122-202ENST00000569013 197 ntBASIC2.93□□□□□ -1.94
VCPP55072 MIR3921-201ENST00000577308 85 ntBASIC2.93□□□□□ -1.94
VCPP55072 NDUFV2-AS1-202ENST00000583081 399 ntTSL 5 BASIC2.93□□□□□ -1.94
VCPP55072 AC105224.1-201ENST00000587055 421 ntBASIC2.93□□□□□ -1.94
VCPP55072 AP002791.1-201ENST00000623291 381 ntBASIC2.93□□□□□ -1.94
VCPP55072 AP000770.2-201ENST00000623694 100 ntBASIC2.93□□□□□ -1.94
VCPP55072 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC2.93□□□□□ -1.94
VCPP55072 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
VCPP55072 RNU6-433P-201ENST00000363216 104 ntBASIC2.92□□□□□ -1.94
VCPP55072 RNA5SP88-201ENST00000365560 109 ntBASIC2.92□□□□□ -1.94
VCPP55072 RNU6-198P-201ENST00000384258 104 ntBASIC2.92□□□□□ -1.94
VCPP55072 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC2.92□□□□□ -1.94
VCPP55072 RNU6-482P-201ENST00000391068 107 ntBASIC2.92□□□□□ -1.94
VCPP55072 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
VCPP55072 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC2.92□□□□□ -1.94
VCPP55072 AC098592.1-201ENST00000419352 333 ntBASIC2.92□□□□□ -1.94
VCPP55072 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC2.92□□□□□ -1.94
VCPP55072 RAB6C-AS1-202ENST00000433431 123 ntBASIC2.92□□□□□ -1.94
VCPP55072 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC2.92□□□□□ -1.94
VCPP55072 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC2.92□□□□□ -1.94
VCPP55072 MTCYBP3-201ENST00000445588 1137 ntBASIC2.92□□□□□ -1.94
VCPP55072 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC2.92□□□□□ -1.94
VCPP55072 AC234775.1-201ENST00000454247 670 ntBASIC2.92□□□□□ -1.94
VCPP55072 AC021382.1-201ENST00000483523 359 ntBASIC2.92□□□□□ -1.94
VCPP55072 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC2.92□□□□□ -1.94
VCPP55072 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC2.92□□□□□ -1.94
VCPP55072 SNORA9.3-201ENST00000516383 129 ntBASIC2.92□□□□□ -1.94
VCPP55072 HPRT1P3-201ENST00000539521 576 ntBASIC2.92□□□□□ -1.94
VCPP55072 AC009094.1-201ENST00000564443 426 ntBASIC2.92□□□□□ -1.94
VCPP55072 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC2.92□□□□□ -1.94
VCPP55072 MIR3605-201ENST00000583214 100 ntBASIC2.92□□□□□ -1.94
VCPP55072 AC099811.4-201ENST00000592536 496 ntTSL 2 BASIC2.92□□□□□ -1.94
VCPP55072 AC021171.1-201ENST00000603137 706 ntBASIC2.92□□□□□ -1.94
VCPP55072 AC072039.2-201ENST00000608883 439 ntBASIC2.92□□□□□ -1.94
VCPP55072 AC245297.3-203ENST00000612135 405 ntTSL 5 BASIC2.92□□□□□ -1.94
VCPP55072 DLEU1_2.1-201ENST00000617920 342 ntBASIC2.92□□□□□ -1.94
VCPP55072 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC2.92□□□□□ -1.94
VCPP55072 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC2.92□□□□□ -1.94
VCPP55072 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC2.92□□□□□ -1.94
VCPP55072 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.92□□□□□ -1.94
VCPP55072 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC2.92□□□□□ -1.94
VCPP55072 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.92□□□□□ -1.94
VCPP55072 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
VCPP55072 AC012321.1-201ENST00000561622 1588 ntBASIC2.91□□□□□ -1.94
VCPP55072 RNU1-112P-201ENST00000364401 164 ntBASIC2.91□□□□□ -1.94
VCPP55072 RNU6-253P-201ENST00000384730 105 ntBASIC2.91□□□□□ -1.94
VCPP55072 RN7SKP266-201ENST00000410232 287 ntBASIC2.91□□□□□ -1.94
VCPP55072 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC2.91□□□□□ -1.94
VCPP55072 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC2.91□□□□□ -1.94
VCPP55072 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC2.91□□□□□ -1.94
VCPP55072 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC2.91□□□□□ -1.94
VCPP55072 THAP5P1-201ENST00000439089 262 ntBASIC2.91□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 83 ms