Protein–RNA interactions for Protein: P55055

NR1H2, Oxysterols receptor LXR-beta, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H2P55055 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC3.51□□□□□ -1.85
NR1H2P55055 ACEA_U3.1-201ENST00000363057 217 ntBASIC3.51□□□□□ -1.85
NR1H2P55055 Y_RNA.245-201ENST00000364493 95 ntBASIC3.51□□□□□ -1.85
NR1H2P55055 SNORA14A-201ENST00000364773 135 ntBASIC3.51□□□□□ -1.85
NR1H2P55055 RNU6-217P-201ENST00000384164 104 ntBASIC3.51□□□□□ -1.85
NR1H2P55055 RNU1-101P-201ENST00000391171 127 ntBASIC3.51□□□□□ -1.85
NR1H2P55055 RPL17P50-201ENST00000396131 546 ntBASIC3.51□□□□□ -1.85
NR1H2P55055 GSTA9P-201ENST00000406231 611 ntBASIC3.51□□□□□ -1.85
NR1H2P55055 AC093578.1-201ENST00000415219 368 ntBASIC3.51□□□□□ -1.85
NR1H2P55055 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC3.51□□□□□ -1.85
NR1H2P55055 RPL36AP6-201ENST00000435770 321 ntBASIC3.51□□□□□ -1.85
NR1H2P55055 MTND1P1-201ENST00000445453 368 ntBASIC3.51□□□□□ -1.85
NR1H2P55055 AC018731.1-201ENST00000447078 576 ntTSL 4 BASIC3.51□□□□□ -1.85
NR1H2P55055 AC006480.1-201ENST00000449887 378 ntBASIC3.51□□□□□ -1.85
NR1H2P55055 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC3.51□□□□□ -1.85
NR1H2P55055 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC3.51□□□□□ -1.85
NR1H2P55055 SRRM1P2-201ENST00000464531 1192 ntBASIC3.51□□□□□ -1.85
NR1H2P55055 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC3.51□□□□□ -1.85
NR1H2P55055 AC004924.1-201ENST00000480160 781 ntBASIC3.51□□□□□ -1.85
NR1H2P55055 RPL9P6-201ENST00000492764 598 ntBASIC3.51□□□□□ -1.85
NR1H2P55055 RNU6-1220P-201ENST00000517126 108 ntBASIC3.51□□□□□ -1.85
NR1H2P55055 RNA5SP290-201ENST00000517133 127 ntBASIC3.51□□□□□ -1.85
NR1H2P55055 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
NR1H2P55055 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC3.51□□□□□ -1.85
NR1H2P55055 ARL2BPP2-201ENST00000550907 489 ntBASIC3.51□□□□□ -1.85
NR1H2P55055 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC3.51□□□□□ -1.85
NR1H2P55055 AC006960.3-201ENST00000561845 705 ntBASIC3.51□□□□□ -1.85
NR1H2P55055 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC3.51□□□□□ -1.85
NR1H2P55055 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC3.51□□□□□ -1.85
NR1H2P55055 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
NR1H2P55055 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC3.51□□□□□ -1.85
NR1H2P55055 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC3.51□□□□□ -1.85
NR1H2P55055 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.51□□□□□ -1.85
NR1H2P55055 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
NR1H2P55055 AC068792.1-201ENST00000621354 417 ntBASIC3.51□□□□□ -1.85
NR1H2P55055 AC073308.1-201ENST00000623696 305 ntBASIC3.51□□□□□ -1.85
NR1H2P55055 C17orf112-201ENST00000623702 835 ntTSL 2 BASIC3.51□□□□□ -1.85
NR1H2P55055 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC3.51□□□□□ -1.85
NR1H2P55055 AC012442.3-202ENST00000636742 206 ntBASIC3.51□□□□□ -1.85
NR1H2P55055 AL359693.1-201ENST00000614959 2407 ntBASIC3.51□□□□□ -1.85
NR1H2P55055 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC3.51□□□□□ -1.85
NR1H2P55055 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC3.5□□□□□ -1.85
NR1H2P55055 RNU6-1167P-201ENST00000363227 94 ntBASIC3.5□□□□□ -1.85
NR1H2P55055 RNA5SP97-201ENST00000365006 84 ntBASIC3.5□□□□□ -1.85
NR1H2P55055 RNU6-282P-201ENST00000365357 103 ntBASIC3.5□□□□□ -1.85
NR1H2P55055 RNU6-701P-201ENST00000384059 107 ntBASIC3.5□□□□□ -1.85
NR1H2P55055 OR2AS1P-201ENST00000427827 319 ntBASIC3.5□□□□□ -1.85
NR1H2P55055 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC3.5□□□□□ -1.85
NR1H2P55055 AC133104.1-201ENST00000429100 218 ntBASIC3.5□□□□□ -1.85
NR1H2P55055 OR2B8P-201ENST00000432841 938 ntBASIC3.5□□□□□ -1.85
NR1H2P55055 AL451074.3-201ENST00000437709 472 ntBASIC3.5□□□□□ -1.85
NR1H2P55055 HMGB3P12-201ENST00000438745 556 ntBASIC3.5□□□□□ -1.85
NR1H2P55055 AL360089.1-201ENST00000442260 436 ntTSL 5 BASIC3.5□□□□□ -1.85
NR1H2P55055 AC096558.1-202ENST00000442794 561 ntTSL 4 BASIC3.5□□□□□ -1.85
NR1H2P55055 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC3.5□□□□□ -1.85
NR1H2P55055 RANP8-201ENST00000444720 713 ntBASIC3.5□□□□□ -1.85
NR1H2P55055 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC3.5□□□□□ -1.85
NR1H2P55055 AL133547.1-201ENST00000448546 220 ntBASIC3.5□□□□□ -1.85
NR1H2P55055 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC3.5□□□□□ -1.85
NR1H2P55055 DCLRE1CP1-201ENST00000454630 470 ntBASIC3.5□□□□□ -1.85
NR1H2P55055 NDUFAF4P4-201ENST00000454883 502 ntBASIC3.5□□□□□ -1.85
NR1H2P55055 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC3.5□□□□□ -1.85
NR1H2P55055 AP002884.2-201ENST00000471647 395 ntBASIC3.5□□□□□ -1.85
NR1H2P55055 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3.5□□□□□ -1.85
NR1H2P55055 AL135752.1-201ENST00000479477 471 ntBASIC3.5□□□□□ -1.85
NR1H2P55055 AC108078.1-201ENST00000508073 725 ntBASIC3.5□□□□□ -1.85
NR1H2P55055 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC3.5□□□□□ -1.85
NR1H2P55055 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC3.5□□□□□ -1.85
NR1H2P55055 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC3.5□□□□□ -1.85
NR1H2P55055 AP006587.4-201ENST00000526053 529 ntBASIC3.5□□□□□ -1.85
NR1H2P55055 AP000867.2-201ENST00000532468 320 ntBASIC3.5□□□□□ -1.85
NR1H2P55055 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC3.5□□□□□ -1.85
NR1H2P55055 CYCSP30-201ENST00000546447 172 ntBASIC3.5□□□□□ -1.85
NR1H2P55055 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC3.5□□□□□ -1.85
NR1H2P55055 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC3.5□□□□□ -1.85
NR1H2P55055 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC3.5□□□□□ -1.85
NR1H2P55055 AL845331.3-202ENST00000562856 261 ntBASIC3.5□□□□□ -1.85
NR1H2P55055 AC037471.2-201ENST00000564941 598 ntBASIC3.5□□□□□ -1.85
NR1H2P55055 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC3.5□□□□□ -1.85
NR1H2P55055 AC008739.3-201ENST00000603262 127 ntBASIC3.5□□□□□ -1.85
NR1H2P55055 AC012468.1-201ENST00000604888 430 ntBASIC3.5□□□□□ -1.85
NR1H2P55055 AL136363.1-201ENST00000605349 337 ntBASIC3.5□□□□□ -1.85
NR1H2P55055 SNORA51-201ENST00000606420 132 ntBASIC3.5□□□□□ -1.85
NR1H2P55055 AC004852.3-201ENST00000614131 326 ntBASIC3.5□□□□□ -1.85
NR1H2P55055 AL121772.2-201ENST00000614331 297 ntBASIC3.5□□□□□ -1.85
NR1H2P55055 AL158209.2-201ENST00000619266 216 ntBASIC3.5□□□□□ -1.85
NR1H2P55055 AL354798.1-201ENST00000622505 329 ntBASIC3.5□□□□□ -1.85
NR1H2P55055 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC3.5□□□□□ -1.85
NR1H2P55055 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
NR1H2P55055 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
NR1H2P55055 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.49□□□□□ -1.85
NR1H2P55055 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC3.49□□□□□ -1.85
NR1H2P55055 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
NR1H2P55055 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
NR1H2P55055 MIR30E-201ENST00000362104 92 ntBASIC3.49□□□□□ -1.85
NR1H2P55055 RNU6-181P-201ENST00000363225 107 ntBASIC3.49□□□□□ -1.85
NR1H2P55055 RNU6-169P-201ENST00000365336 107 ntBASIC3.49□□□□□ -1.85
NR1H2P55055 RNU6-140P-201ENST00000384566 108 ntBASIC3.49□□□□□ -1.85
NR1H2P55055 AL354719.1-201ENST00000406535 843 ntBASIC3.49□□□□□ -1.85
NR1H2P55055 RNU2-36P-201ENST00000410361 191 ntBASIC3.49□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 113.3 ms