Protein–RNA interactions for Protein: P53621

COPA, Coatomer subunit alpha, humanhuman

Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPAP53621 AP002826.1-201ENST00000608835 315 ntBASIC3.88□□□□□ -1.79
COPAP53621 AC093788.1-201ENST00000609356 927 ntBASIC3.88□□□□□ -1.79
COPAP53621 AL589994.2-201ENST00000621124 579 ntBASIC3.88□□□□□ -1.79
COPAP53621 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC3.88□□□□□ -1.79
COPAP53621 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC3.88□□□□□ -1.79
COPAP53621 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC3.88□□□□□ -1.79
COPAP53621 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
COPAP53621 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC3.88□□□□□ -1.79
COPAP53621 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
COPAP53621 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC3.87□□□□□ -1.79
COPAP53621 Y_RNA.22-201ENST00000362492 102 ntBASIC3.87□□□□□ -1.79
COPAP53621 RNU6-188P-201ENST00000364207 107 ntBASIC3.87□□□□□ -1.79
COPAP53621 Y_RNA.295-201ENST00000364918 102 ntBASIC3.87□□□□□ -1.79
COPAP53621 PARD3-204ENST00000374768 799 ntTSL 3 BASIC3.87□□□□□ -1.79
COPAP53621 RNU6-877P-201ENST00000383868 107 ntBASIC3.87□□□□□ -1.79
COPAP53621 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
COPAP53621 AL591034.1-201ENST00000407447 340 ntBASIC3.87□□□□□ -1.79
COPAP53621 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
COPAP53621 AC093106.2-201ENST00000428212 385 ntBASIC3.87□□□□□ -1.79
COPAP53621 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC3.87□□□□□ -1.79
COPAP53621 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC3.87□□□□□ -1.79
COPAP53621 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC3.87□□□□□ -1.79
COPAP53621 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC3.87□□□□□ -1.79
COPAP53621 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC3.87□□□□□ -1.79
COPAP53621 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC3.87□□□□□ -1.79
COPAP53621 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC3.87□□□□□ -1.79
COPAP53621 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC3.87□□□□□ -1.79
COPAP53621 RPL36AP51-201ENST00000487216 318 ntBASIC3.87□□□□□ -1.79
COPAP53621 FCF1P3-201ENST00000496394 590 ntBASIC3.87□□□□□ -1.79
COPAP53621 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC3.87□□□□□ -1.79
COPAP53621 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC3.87□□□□□ -1.79
COPAP53621 AC104383.1-201ENST00000530297 370 ntBASIC3.87□□□□□ -1.79
COPAP53621 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC3.87□□□□□ -1.79
COPAP53621 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC3.87□□□□□ -1.79
COPAP53621 AL355836.1-201ENST00000555951 870 ntBASIC3.87□□□□□ -1.79
COPAP53621 RPL23AP84-201ENST00000571193 464 ntBASIC3.87□□□□□ -1.79
COPAP53621 MIR3944-201ENST00000581277 108 ntBASIC3.87□□□□□ -1.79
COPAP53621 MIR5187-201ENST00000583479 76 ntBASIC3.87□□□□□ -1.79
COPAP53621 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC3.87□□□□□ -1.79
COPAP53621 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC3.87□□□□□ -1.79
COPAP53621 AL162413.1-201ENST00000603198 110 ntBASIC3.87□□□□□ -1.79
COPAP53621 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC3.87□□□□□ -1.79
COPAP53621 AC002553.4-201ENST00000616896 331 ntBASIC3.87□□□□□ -1.79
COPAP53621 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC3.87□□□□□ -1.79
COPAP53621 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC3.86□□□□□ -1.79
COPAP53621 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
COPAP53621 ZNF680P1-201ENST00000436625 1469 ntBASIC3.86□□□□□ -1.79
COPAP53621 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
COPAP53621 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC3.86□□□□□ -1.79
COPAP53621 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
COPAP53621 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
COPAP53621 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
COPAP53621 Y_RNA.89-201ENST00000363031 102 ntBASIC3.86□□□□□ -1.79
COPAP53621 RNU6-701P-201ENST00000384059 107 ntBASIC3.86□□□□□ -1.79
COPAP53621 RNU6-74P-201ENST00000384235 107 ntBASIC3.86□□□□□ -1.79
COPAP53621 MIR7-3-201ENST00000384898 110 ntBASIC3.86□□□□□ -1.79
COPAP53621 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC3.86□□□□□ -1.79
COPAP53621 NDUFS5P1-201ENST00000405668 289 ntBASIC3.86□□□□□ -1.79
COPAP53621 HSPE1P8-201ENST00000406997 288 ntBASIC3.86□□□□□ -1.79
COPAP53621 Z98941.1-201ENST00000407764 100 ntBASIC3.86□□□□□ -1.79
COPAP53621 Y_RNA.604-201ENST00000410574 102 ntBASIC3.86□□□□□ -1.79
COPAP53621 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC3.86□□□□□ -1.79
COPAP53621 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC3.86□□□□□ -1.79
COPAP53621 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC3.86□□□□□ -1.79
COPAP53621 RPS15AP9-201ENST00000439856 381 ntBASIC3.86□□□□□ -1.79
COPAP53621 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC3.86□□□□□ -1.79
COPAP53621 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC3.86□□□□□ -1.79
COPAP53621 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC3.86□□□□□ -1.79
COPAP53621 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC3.86□□□□□ -1.79
COPAP53621 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC3.86□□□□□ -1.79
COPAP53621 HSPD1P15-201ENST00000505573 1122 ntBASIC3.86□□□□□ -1.79
COPAP53621 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
COPAP53621 AC117522.1-201ENST00000509821 380 ntBASIC3.86□□□□□ -1.79
COPAP53621 AL359273.1-201ENST00000510918 627 ntBASIC3.86□□□□□ -1.79
COPAP53621 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC3.86□□□□□ -1.79
COPAP53621 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC3.86□□□□□ -1.79
COPAP53621 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC3.86□□□□□ -1.79
COPAP53621 AC022695.1-201ENST00000522089 237 ntBASIC3.86□□□□□ -1.79
COPAP53621 IGHV3-76-201ENST00000522465 295 ntBASIC3.86□□□□□ -1.79
COPAP53621 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC3.86□□□□□ -1.79
COPAP53621 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC3.86□□□□□ -1.79
COPAP53621 MIR3186-201ENST00000577404 85 ntBASIC3.86□□□□□ -1.79
COPAP53621 MIR548S-201ENST00000581352 82 ntBASIC3.86□□□□□ -1.79
COPAP53621 BRDTP1-201ENST00000605735 677 ntBASIC3.86□□□□□ -1.79
COPAP53621 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC3.86□□□□□ -1.79
COPAP53621 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC3.86□□□□□ -1.79
COPAP53621 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
COPAP53621 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
COPAP53621 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
COPAP53621 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
COPAP53621 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
COPAP53621 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
COPAP53621 RNU6-960P-201ENST00000364056 120 ntBASIC3.85□□□□□ -1.79
COPAP53621 RNA5SP387-201ENST00000364226 106 ntBASIC3.85□□□□□ -1.79
COPAP53621 Y_RNA.367-201ENST00000365544 101 ntBASIC3.85□□□□□ -1.79
COPAP53621 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
COPAP53621 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC3.85□□□□□ -1.79
COPAP53621 AC068050.1-201ENST00000394891 380 ntBASIC3.85□□□□□ -1.79
COPAP53621 HLFP1-201ENST00000402375 499 ntBASIC3.85□□□□□ -1.79
COPAP53621 AL078595.1-201ENST00000404458 226 ntBASIC3.85□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 110.4 ms