Protein–RNA interactions for Protein: P52948

NUP98, Nuclear pore complex protein Nup98-Nup96, humanhuman

Predictions only

Length 1,817 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98P52948 PCDH9-AS2-201ENST00000419371 538 ntTSL 3 BASIC1.69□□□□□ -2.14
NUP98P52948 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC1.69□□□□□ -2.14
NUP98P52948 HMGN2P38-201ENST00000423806 265 ntBASIC1.69□□□□□ -2.14
NUP98P52948 AL358075.3-201ENST00000426289 226 ntBASIC1.69□□□□□ -2.14
NUP98P52948 RPL7L1P10-201ENST00000427790 463 ntBASIC1.69□□□□□ -2.14
NUP98P52948 AC079780.1-201ENST00000428259 207 ntBASIC1.69□□□□□ -2.14
NUP98P52948 IFNA20P-201ENST00000436840 528 ntBASIC1.69□□□□□ -2.14
NUP98P52948 AC010105.1-201ENST00000437290 385 ntTSL 5 BASIC1.69□□□□□ -2.14
NUP98P52948 AL357052.1-201ENST00000443504 381 ntTSL 3 BASIC1.69□□□□□ -2.14
NUP98P52948 RNU7-26P-201ENST00000458980 63 ntBASIC1.69□□□□□ -2.14
NUP98P52948 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC1.69□□□□□ -2.14
NUP98P52948 SRP72-202ENST00000504757 745 ntTSL 2 BASIC1.69□□□□□ -2.14
NUP98P52948 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC1.69□□□□□ -2.14
NUP98P52948 RNA5SP102-201ENST00000516865 106 ntBASIC1.69□□□□□ -2.14
NUP98P52948 BTF3P12-201ENST00000519620 469 ntBASIC1.69□□□□□ -2.14
NUP98P52948 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC1.69□□□□□ -2.14
NUP98P52948 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC1.69□□□□□ -2.14
NUP98P52948 AL137246.1-201ENST00000607072 977 ntBASIC1.69□□□□□ -2.14
NUP98P52948 AC092608.3-201ENST00000625017 386 ntBASIC1.69□□□□□ -2.14
NUP98P52948 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC1.69□□□□□ -2.14
NUP98P52948 SEC63P2-201ENST00000503863 1939 ntBASIC1.68□□□□□ -2.14
NUP98P52948 ENSAP3-201ENST00000312710 333 ntBASIC1.68□□□□□ -2.14
NUP98P52948 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC1.68□□□□□ -2.14
NUP98P52948 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC1.68□□□□□ -2.14
NUP98P52948 SNAPC3-201ENST00000380799 753 ntTSL 3 BASIC1.68□□□□□ -2.14
NUP98P52948 MIR499A-201ENST00000384903 122 ntBASIC1.68□□□□□ -2.14
NUP98P52948 MIR489-201ENST00000384923 84 ntBASIC1.68□□□□□ -2.14
NUP98P52948 MIR525-201ENST00000384978 85 ntBASIC1.68□□□□□ -2.14
NUP98P52948 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.68□□□□□ -2.14
NUP98P52948 AC012497.1-201ENST00000429392 575 ntBASIC1.68□□□□□ -2.14
NUP98P52948 RPL35AP22-201ENST00000436855 335 ntBASIC1.68□□□□□ -2.14
NUP98P52948 AL591848.2-201ENST00000442712 522 ntTSL 3 BASIC1.68□□□□□ -2.14
NUP98P52948 RPS15AP27-201ENST00000449183 343 ntBASIC1.68□□□□□ -2.14
NUP98P52948 AC025768.1-201ENST00000510057 267 ntBASIC1.68□□□□□ -2.14
NUP98P52948 IGHVII-53-1-201ENST00000519538 255 ntBASIC1.68□□□□□ -2.14
NUP98P52948 OR5AK1P-201ENST00000524837 922 ntBASIC1.68□□□□□ -2.14
NUP98P52948 LINC02410-201ENST00000553095 393 ntTSL 2 BASIC1.68□□□□□ -2.14
NUP98P52948 BNIP3P4-201ENST00000604946 565 ntBASIC1.68□□□□□ -2.14
NUP98P52948 AC097504.2-201ENST00000608088 454 ntBASIC1.68□□□□□ -2.14
NUP98P52948 AC016542.1-201ENST00000608259 493 ntBASIC1.68□□□□□ -2.14
NUP98P52948 MIR6767-201ENST00000637302 66 ntBASIC1.68□□□□□ -2.14
NUP98P52948 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
NUP98P52948 AC009812.4-201ENST00000569134 1805 ntBASIC1.68□□□□□ -2.14
NUP98P52948 DEFB108F-201ENST00000344638 222 ntBASIC1.68□□□□□ -2.14
NUP98P52948 SNORA38-201ENST00000363946 132 ntBASIC1.68□□□□□ -2.14
NUP98P52948 RNU4-72P-201ENST00000410754 173 ntBASIC1.68□□□□□ -2.14
NUP98P52948 LINC01065-201ENST00000417989 577 ntTSL 3 BASIC1.68□□□□□ -2.14
NUP98P52948 AL121578.1-201ENST00000428051 892 ntBASIC1.68□□□□□ -2.14
NUP98P52948 MTCO1P42-201ENST00000457379 726 ntBASIC1.68□□□□□ -2.14
NUP98P52948 AC087588.1-201ENST00000462203 316 ntBASIC1.68□□□□□ -2.14
NUP98P52948 TOMM22P6-201ENST00000465035 409 ntBASIC1.68□□□□□ -2.14
NUP98P52948 RPL7P18-201ENST00000478965 734 ntBASIC1.68□□□□□ -2.14
NUP98P52948 SNHG27-202ENST00000507933 491 ntTSL 2 BASIC1.68□□□□□ -2.14
NUP98P52948 DEFB108D-201ENST00000527787 222 ntBASIC1.68□□□□□ -2.14
NUP98P52948 AC009127.3-201ENST00000570531 403 ntBASIC1.68□□□□□ -2.14
NUP98P52948 MIR5571-201ENST00000577998 113 ntBASIC1.68□□□□□ -2.14
NUP98P52948 AC005498.1-201ENST00000592125 465 ntBASIC1.68□□□□□ -2.14
NUP98P52948 AC012669.1-201ENST00000603209 283 ntBASIC1.68□□□□□ -2.14
NUP98P52948 AC009032.1-201ENST00000617574 431 ntBASIC1.68□□□□□ -2.14
NUP98P52948 AC073968.1-201ENST00000618594 637 ntBASIC1.68□□□□□ -2.14
NUP98P52948 AC073569.3-201ENST00000619055 682 ntBASIC1.68□□□□□ -2.14
NUP98P52948 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC1.68□□□□□ -2.14
NUP98P52948 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC1.67□□□□□ -2.14
NUP98P52948 AC098614.2-201ENST00000426040 255 ntBASIC1.67□□□□□ -2.14
NUP98P52948 RNA5SP471-201ENST00000516971 106 ntBASIC1.67□□□□□ -2.14
NUP98P52948 SNORA31.18-201ENST00000517043 134 ntBASIC1.67□□□□□ -2.14
NUP98P52948 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.67□□□□□ -2.14
NUP98P52948 AC025755.1-201ENST00000521306 278 ntBASIC1.67□□□□□ -2.14
NUP98P52948 AC090739.1-201ENST00000522190 708 ntTSL 3 BASIC1.67□□□□□ -2.14
NUP98P52948 AC008015.1-201ENST00000555505 465 ntBASIC1.67□□□□□ -2.14
NUP98P52948 ANP32BP3-201ENST00000559213 706 ntBASIC1.67□□□□□ -2.14
NUP98P52948 AC015727.1-201ENST00000572792 512 ntTSL 5 BASIC1.67□□□□□ -2.14
NUP98P52948 AC079395.3-201ENST00000615161 484 ntBASIC1.67□□□□□ -2.14
NUP98P52948 uc_338.12-201ENST00000616344 181 ntBASIC1.67□□□□□ -2.14
NUP98P52948 MIR649-201ENST00000384843 97 ntBASIC1.66□□□□□ -2.14
NUP98P52948 MIR320A-201ENST00000385302 82 ntBASIC1.66□□□□□ -2.14
NUP98P52948 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC1.66□□□□□ -2.14
NUP98P52948 AL589935.1-218ENST00000434683 529 ntTSL 3 BASIC1.66□□□□□ -2.14
NUP98P52948 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC1.66□□□□□ -2.14
NUP98P52948 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC1.66□□□□□ -2.14
NUP98P52948 snoU109.4-201ENST00000458953 143 ntBASIC1.66□□□□□ -2.14
NUP98P52948 AC080013.2-201ENST00000460866 323 ntBASIC1.66□□□□□ -2.14
NUP98P52948 AL135752.1-201ENST00000479477 471 ntBASIC1.66□□□□□ -2.14
NUP98P52948 RPS27P23-201ENST00000487608 251 ntBASIC1.66□□□□□ -2.14
NUP98P52948 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
NUP98P52948 AC010273.1-201ENST00000504129 946 ntTSL 5 BASIC1.66□□□□□ -2.14
NUP98P52948 MRPS36P2-201ENST00000512569 299 ntBASIC1.66□□□□□ -2.14
NUP98P52948 RNA5SP61-201ENST00000516453 100 ntBASIC1.66□□□□□ -2.14
NUP98P52948 RNA5SP490-201ENST00000517141 136 ntBASIC1.66□□□□□ -2.14
NUP98P52948 OR5AQ1P-201ENST00000527596 927 ntBASIC1.66□□□□□ -2.14
NUP98P52948 AC084033.1-201ENST00000550830 633 ntBASIC1.66□□□□□ -2.14
NUP98P52948 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC1.66□□□□□ -2.14
NUP98P52948 AC095057.3-201ENST00000567102 1157 ntBASIC1.66□□□□□ -2.14
NUP98P52948 AC106796.1-201ENST00000577173 615 ntTSL 3 BASIC1.66□□□□□ -2.14
NUP98P52948 AC011260.1-201ENST00000578420 472 ntBASIC1.66□□□□□ -2.14
NUP98P52948 MIR5194-201ENST00000582634 120 ntBASIC1.66□□□□□ -2.14
NUP98P52948 MIR4658-201ENST00000584344 65 ntBASIC1.66□□□□□ -2.14
NUP98P52948 MYL12B-204ENST00000584539 1064 ntAPPRIS P1 TSL 3 BASIC1.66□□□□□ -2.14
NUP98P52948 RPS15AP11-201ENST00000594193 385 ntBASIC1.66□□□□□ -2.14
NUP98P52948 AC005332.10-201ENST00000612725 619 ntBASIC1.66□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 112 ms