Protein–RNA interactions for Protein: P52926

HMGA2, High mobility group protein HMGI-C, humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2P52926 SNORA11.5-201ENST00000408163 128 ntBASIC3.87□□□□□ -1.79
HMGA2P52926 MIR1178-201ENST00000408396 91 ntBASIC3.87□□□□□ -1.79
HMGA2P52926 RPL21P24-201ENST00000413752 448 ntBASIC3.87□□□□□ -1.79
HMGA2P52926 BX682237.1-201ENST00000415016 335 ntBASIC3.87□□□□□ -1.79
HMGA2P52926 TMSB10P2-201ENST00000416049 131 ntBASIC3.87□□□□□ -1.79
HMGA2P52926 BX510359.3-201ENST00000422168 306 ntBASIC3.87□□□□□ -1.79
HMGA2P52926 AL360081.1-201ENST00000428299 555 ntBASIC3.87□□□□□ -1.79
HMGA2P52926 DYNLL1P5-201ENST00000467158 270 ntBASIC3.87□□□□□ -1.79
HMGA2P52926 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC3.87□□□□□ -1.79
HMGA2P52926 AC110792.1-201ENST00000491826 472 ntBASIC3.87□□□□□ -1.79
HMGA2P52926 RPS4XP14-201ENST00000493072 781 ntBASIC3.87□□□□□ -1.79
HMGA2P52926 AC093852.1-201ENST00000503587 266 ntBASIC3.87□□□□□ -1.79
HMGA2P52926 AKIRIN2P1-201ENST00000505898 352 ntBASIC3.87□□□□□ -1.79
HMGA2P52926 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC3.87□□□□□ -1.79
HMGA2P52926 RNU6-202P-201ENST00000515998 96 ntBASIC3.87□□□□□ -1.79
HMGA2P52926 IGKV2D-10-201ENST00000520194 281 ntBASIC3.87□□□□□ -1.79
HMGA2P52926 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC3.87□□□□□ -1.79
HMGA2P52926 AC107016.1-201ENST00000550463 337 ntBASIC3.87□□□□□ -1.79
HMGA2P52926 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC3.87□□□□□ -1.79
HMGA2P52926 AC006600.1-201ENST00000572529 153 ntBASIC3.87□□□□□ -1.79
HMGA2P52926 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC3.87□□□□□ -1.79
HMGA2P52926 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC3.87□□□□□ -1.79
HMGA2P52926 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
HMGA2P52926 AL445363.3-201ENST00000623080 671 ntBASIC3.87□□□□□ -1.79
HMGA2P52926 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC3.87□□□□□ -1.79
HMGA2P52926 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC3.87□□□□□ -1.79
HMGA2P52926 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC3.87□□□□□ -1.79
HMGA2P52926 AC090740.1-201ENST00000623193 2262 ntBASIC3.87□□□□□ -1.79
HMGA2P52926 AC134882.1-201ENST00000603738 1676 ntBASIC3.87□□□□□ -1.79
HMGA2P52926 FAM114A2-210ENST00000520313 1394 ntTSL 2 BASIC3.87□□□□□ -1.79
HMGA2P52926 CCDC178-209ENST00000579947 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC3.87□□□□□ -1.79
HMGA2P52926 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC3.86□□□□□ -1.79
HMGA2P52926 FOXP2-203ENST00000378237 2187 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
HMGA2P52926 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC3.86□□□□□ -1.79
HMGA2P52926 MEIOB-205ENST00000470044 1857 ntTSL 2 BASIC3.86□□□□□ -1.79
HMGA2P52926 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC3.86□□□□□ -1.79
HMGA2P52926 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
HMGA2P52926 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC3.86□□□□□ -1.79
HMGA2P52926 RNU6-1298P-201ENST00000362456 101 ntBASIC3.86□□□□□ -1.79
HMGA2P52926 snoU2_19.2-201ENST00000363024 80 ntBASIC3.86□□□□□ -1.79
HMGA2P52926 SNORA51.1-201ENST00000363243 140 ntBASIC3.86□□□□□ -1.79
HMGA2P52926 RNU6-511P-201ENST00000363496 107 ntBASIC3.86□□□□□ -1.79
HMGA2P52926 Y_RNA.471-201ENST00000384312 102 ntBASIC3.86□□□□□ -1.79
HMGA2P52926 RNU6-1127P-201ENST00000384580 107 ntBASIC3.86□□□□□ -1.79
HMGA2P52926 UBE2D3P2-201ENST00000424409 445 ntBASIC3.86□□□□□ -1.79
HMGA2P52926 RPL12P34-201ENST00000424532 479 ntBASIC3.86□□□□□ -1.79
HMGA2P52926 TEX41-205ENST00000431734 529 ntTSL 4 BASIC3.86□□□□□ -1.79
HMGA2P52926 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC3.86□□□□□ -1.79
HMGA2P52926 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC3.86□□□□□ -1.79
HMGA2P52926 FTH1P1-201ENST00000437933 532 ntBASIC3.86□□□□□ -1.79
HMGA2P52926 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC3.86□□□□□ -1.79
HMGA2P52926 NEFMP1-201ENST00000443423 1006 ntBASIC3.86□□□□□ -1.79
HMGA2P52926 RPL29P29-201ENST00000448725 423 ntBASIC3.86□□□□□ -1.79
HMGA2P52926 OR2AQ1P-201ENST00000451972 200 ntBASIC3.86□□□□□ -1.79
HMGA2P52926 LINC01768-201ENST00000453347 476 ntTSL 3 BASIC3.86□□□□□ -1.79
HMGA2P52926 MTCO3P8-201ENST00000453691 755 ntBASIC3.86□□□□□ -1.79
HMGA2P52926 AL136097.1-201ENST00000456945 913 ntBASIC3.86□□□□□ -1.79
HMGA2P52926 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC3.86□□□□□ -1.79
HMGA2P52926 AC087884.1-201ENST00000469738 328 ntBASIC3.86□□□□□ -1.79
HMGA2P52926 RPL23AP2-201ENST00000471227 466 ntBASIC3.86□□□□□ -1.79
HMGA2P52926 AC117503.1-201ENST00000472241 394 ntBASIC3.86□□□□□ -1.79
HMGA2P52926 AC104563.1-201ENST00000476147 376 ntBASIC3.86□□□□□ -1.79
HMGA2P52926 RN7SL629P-201ENST00000489622 285 ntBASIC3.86□□□□□ -1.79
HMGA2P52926 LINC02513-201ENST00000503465 500 ntTSL 2 BASIC3.86□□□□□ -1.79
HMGA2P52926 NDUFB5P1-201ENST00000508134 564 ntBASIC3.86□□□□□ -1.79
HMGA2P52926 AC011411.1-201ENST00000509592 876 ntBASIC3.86□□□□□ -1.79
HMGA2P52926 AC008716.1-201ENST00000511084 513 ntBASIC3.86□□□□□ -1.79
HMGA2P52926 RNU6-479P-201ENST00000516348 105 ntBASIC3.86□□□□□ -1.79
HMGA2P52926 RNU6-1069P-201ENST00000516612 133 ntBASIC3.86□□□□□ -1.79
HMGA2P52926 RNU1-54P-201ENST00000517181 120 ntBASIC3.86□□□□□ -1.79
HMGA2P52926 TRAPPC2P2-201ENST00000517589 409 ntBASIC3.86□□□□□ -1.79
HMGA2P52926 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC3.86□□□□□ -1.79
HMGA2P52926 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC3.86□□□□□ -1.79
HMGA2P52926 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC3.86□□□□□ -1.79
HMGA2P52926 AP002392.1-201ENST00000537692 208 ntBASIC3.86□□□□□ -1.79
HMGA2P52926 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC3.86□□□□□ -1.79
HMGA2P52926 AC090115.3-201ENST00000553218 849 ntBASIC3.86□□□□□ -1.79
HMGA2P52926 AC018552.1-201ENST00000562099 811 ntBASIC3.86□□□□□ -1.79
HMGA2P52926 AC008687.2-201ENST00000597865 520 ntBASIC3.86□□□□□ -1.79
HMGA2P52926 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC3.86□□□□□ -1.79
HMGA2P52926 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC3.86□□□□□ -1.79
HMGA2P52926 AL159153.1-201ENST00000619688 317 ntBASIC3.86□□□□□ -1.79
HMGA2P52926 RAD17P1-201ENST00000418130 2042 ntBASIC3.86□□□□□ -1.79
HMGA2P52926 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC3.86□□□□□ -1.79
HMGA2P52926 AP001267.1-201ENST00000531742 2074 ntTSL 2 BASIC3.86□□□□□ -1.79
HMGA2P52926 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
HMGA2P52926 OR56B2P-202ENST00000641377 2453 ntBASIC3.86□□□□□ -1.79
HMGA2P52926 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
HMGA2P52926 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
HMGA2P52926 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC3.86□□□□□ -1.79
HMGA2P52926 LCA5L-218ENST00000485895 2551 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
HMGA2P52926 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
HMGA2P52926 ST7-212ENST00000422922 1887 ntTSL 5 BASIC3.86□□□□□ -1.79
HMGA2P52926 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC3.86□□□□□ -1.79
HMGA2P52926 AC009313.2-201ENST00000417893 1941 ntBASIC3.85□□□□□ -1.79
HMGA2P52926 AC025125.1-201ENST00000624743 1922 ntBASIC3.85□□□□□ -1.79
HMGA2P52926 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC3.85□□□□□ -1.79
HMGA2P52926 AC097634.1-201ENST00000604491 2467 ntBASIC3.85□□□□□ -1.79
HMGA2P52926 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC3.85□□□□□ -1.79
HMGA2P52926 EIF2AP4-201ENST00000424793 1781 ntBASIC3.85□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 108.2 ms